Gymnodraco acuticeps: 117556527
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Entry
117556527 CDS
T09661
Symbol
hif1al
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04137
Mitophagy - animal
gacu04140
Autophagy - animal
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117556527 (hif1al)
04137 Mitophagy - animal
117556527 (hif1al)
04148 Efferocytosis
117556527 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117556527 (hif1al)
Transcription factors [BR:
gacu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117556527 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
117556527
NCBI-ProteinID:
XP_034087756
UniProt:
A0A6P8VC86
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSKEDCVQFKYSQTNELNKSYTAGRREESEEEEEEEDQMDALYPXLGGFIMVMTEEGELI
YLTESVSRHIGLTQVHQHLQQQLQQTRENDITFPSAALFVFSGLRKKPLAEQPSERNFFL
RVKSTLTSRGRTVNIKAAAWNVIHCTGHLRQLGGGSXIVPCRHVMTLLCEPIAHPSSVEF
PLDTCTFLTRHNRQFFFNLPVSRVTELVGLGYKPEDLIGCSAYEFYHALDSHHVNKSLQT
LLSKGXVSTRHYRFLANGGGFVWAETQATVLYSSRTSLPEAVVCLNFILSGVEQPDVVFS
VEQTRCGRLPEAEPQPAEDSGISDLSQSDSGSECLTITGQFEDAGSIPSPVAELFLQVKE
ELLKEASEAEDPITPLTGDLLELSFCSPRGQSSVPEHPQELCTPQLRQLLSPIFSPLTPP
SSSSPEDQLLHVSVSEQEVMDLDMLAPYTSMDNDFQQSVLSSVDDKPSSSSKASAGRPAD
PASRKRTHNPDEELLMIQDKRQKADPSSIEEELLLSHRLLDCLEVH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaggactgtgtgcagttcaaatactcacagactaatgagctgaacaaaagc
tatacagcaggtaggagagaagagtctgaggaggaggaagaggaggaagatcagatggat
gctttgtatcccnntctcggtggcttcatcatggtgatgacggaggagggagagctgatc
tacctgacggagagcgtcagcagacacatcggcctcacacaggtacaccagcacctgcag
caacaactacaacaaacaagagagaatgacatcacattcccttcagctgctctgtttgtg
ttttcaggtttacgtaagaaaccgctggcagaacagccgagtgagaggaacttcttcctg
agagtgaagagcacgctgaccagcagggggcgcaccgtcaacatcaaggcagctgcctgg
aacgttatccactgtacgggtcacctccgtcagctgggcgggggctcanncatcgtcccc
tgcaggcatgtgatgaccctgctgtgtgagcccatcgctcacccctccagcgtggagttc
cctctggacacctgcaccttcctcacccgccacaaccggcagtttttcttcaatcttcct
gtttccagggtgacagagttggtgggattaggatacaaacctgaagatctgattggctgc
tcagcctacgagttttatcatgcacttgactctcatcacgtcaacaagagcctgcagaca
ctgctgtccaaaggctaggtgagcaccagacattaccgcttcctggcgaacggcgggggc
ttcgtgtgggcggagacccaggccaccgtcctctacagcagcaggacgtcgctgcccgag
gccgtggtctgcctcaacttcatcctcagcggagtggagcagccggacgtggttttctcc
gtggagcagacccgctgcggccggctgcctgaagctgagccccaaccagcagaggattct
gggatttctgacctcagccagtctgactccggcagtgagtgtctcaccatcaccggtcag
tttgaggacgccggttcgattcccagccccgtggcagagctcttccttcaagtgaaggag
gagcttctgaaggaggcttcagaggcggaggaccccatcaccccgctgacaggagattta
ttggagctgtcattctgcagtccccgcggtcagtcctctgtgccggagcaccctcaagag
ctgtgcaccccccagctgcgtcagctactctcacccatcttcagccccctcactccacct
tcctcatcctcccctgaggatcagctgcttcatgtttctgtctctgagcaggaggtgatg
gatctggatatgttggctccgtatacctccatggacaatgacttccagcagagcgtcctc
agcagtgtggacgacaagccctcctcctcctctaaagcgtccgctgggaggccggcagac
ccagccagcaggaaacggactcataacccagacgaggagttgctgatgattcaggacaag
agacagaaagcagatccttcctccatagaagaggaactgctgctcagccacagactgctg
gactgtctggaggttcactag
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