Gymnodraco acuticeps: 117556616
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Entry
117556616 CDS
T09661
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03013
Nucleocytoplasmic transport
gacu03015
mRNA surveillance pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117556616 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
117556616 (acin1a)
03015 mRNA surveillance pathway
117556616 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117556616 (acin1a)
03041 Spliceosome [BR:
gacu03041
]
117556616 (acin1a)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117556616 (acin1a)
Spliceosome [BR:
gacu03041
]
Complex C
Other components
EJC/TREX
117556616 (acin1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
117556616
NCBI-ProteinID:
XP_034087934
UniProt:
A0A6P8VCG0
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTNH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYDTNDQEDHTEVNNSTPCP
PPAQEAPPPLAEQQKPPGPSGGEGLFGAANEAEGNRNQEAHMSGPPASGSVAMRVPVAEH
RPERGSASNQVAADSNDDDSDDGDEDGDNDDWEGGAHRRSNREPARAPASRERSGVPCQP
PQQHMPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAAAGRSSSTSSSGSSSS
DSRSSSPEPQRSAERKPGPLTLLARKMESEGAFSGAGWHRAAGVEGDGRGPLEGLVSAIT
HTANAAGHMSFSTIPGIPGAYPAHIQAPVSVLKATATEERDRERDSQLEREKALELERQE
KQRKEQAMEEERERAFALALEREEREKALQRERELALERERQVRELALAKEREERERAFA
QELERQRSLEQERLQRERKEREKREREEMERAIEQERARALEQERKERERALEQERLQRE
RALEAERIEREMALEQERLERERFEREKALEQERLERALEQERLEREKAIEKERRERAIE
QERLERERAQEQQRLALERKEKEIIEREKVLQQERKERERALEQERKEKERFEALEQERK
EKERFEALERERKEKERCDALEQERKEKERFEALEQERKEKERFEALERERKEKERLEAL
EQERKEKERYEALERERKERFEALERERKEKERLEALEQERKEKERFDALERERKEKERF
EALERERKEKERFDALEQERKEKERFEALERERKEKERLEALEWERKEKERAEKERLDRE
KALEQERLEKERLEREKALEQEKLERKEKERALEHEKLEKEKSLQKEKEEQETALEQKKE
RARMAEKERESHLPPLKRGRELGFTSLPTPTLLSTGPAAKSSAEEGEKVDAHAKSSISPT
PLSPQSTFKKFRFQREPPIQSSSPSMVIKRPRNFSDTPQPRALTVSALTEVSQQEGLKSS
TEQEGPQKKQEVAAKAPEKETTSPKKEEAKSLVLADKEKVDSAKIETEYAAKEVDKSKGP
REDTAPRRGRETKKDEKHARKRSSSNDSSSSESDSGSSSSGSSSSSTSSREKTRDTTRGK
REEKPKKDQAQGIKETPKVSPSKGGSSVEKRNVTADEEGHNKKPFIEAPTGEEPQRKKKD
NDREKETDKQRQVKETAMAEPEKLPETSEETPKAFSTRKISISSSKSSPGTGGAEGEQDS
GAAAGRKRRWGSSTAVTAKKPSFSITTESLKSLIPDIRPCLGQEAVVDLHPEEAALSGAE
EEERERSDQDLQIRRTVTQVVHPESQENGQKEVKRSKHEDSEEEDVQGDKERTRAHEEKD
RNVMETQSPSHTSRDVEMNTVTPGDTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKV
SSIVHISNLVRPFTLGQLKELLSRTGTLVEEGFWIDKIKSHCFVTYCSSEEAVATRAALH
GVKWPQSNPKVLSVDFCQQDELDFQKGLANRPGAEERGRASGLPSLFPEREQWAEREREM
ERREKARAEREWDRDKVRDFGKPGEEKEGDPQRSLSKEKRRKERAEGKEKKSEKKDKTAE
DPPAKLLDDLFRKTKAAPCIYWLPLTDDNIAQREAARAERMKVRETRRKERDEEEELKKR
EEERKERVKPAGGQTAERSEGEKEKEKEKEKEKEKEKSRDRERDRGRENDKRRDGYRRPE
GRGAGGGRRSRSRSDPRDRRR
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacggtagaccgctccagtcccttcgagttgcg
gatttaaaagctgctcttgaggagaggggactctctaaaagcgggcagaagaatgcactc
attaaaagactcaaaggggccctcatgctggagaatctgcagaggacctcaaccaatcac
atcggactacagccaaactcacagattggagaagaaatgagccagaacagcttcatcaag
cagtatctggctaaacaacaggagctcctgaggcagcggctcgagagagaggcccgtgaa
gcatatgacactaatgatcaagaggaccacacagaagttaataacagtacaccatgccct
cctccagcccaggaagccccgccaccattggctgagcagcaaaagccacccggcccctcc
ggtggagagggattgtttggggcagcgaacgaggcagagggtaacagaaaccaggaagcc
cacatgtccggtcctcctgcgtctggctctgtggccatgcgcgttcctgtcgcagagcac
cgaccagaaagggggtccgcctccaaccaagtcgcagccgacagcaacgatgacgacagt
gatgacggagacgaggatggcgacaacgacgattgggaaggaggcgctcacaggagaagc
aacagagagccggccagagctcccgcgtctagagagaggtccggagtaccctgtcaaccc
cctcagcaacacatgccttcccttctatcccctcaactccgccagcctacacctcctccc
tccccacctccagagttatcattccccttgccggacacccctaaacagagccccccaagt
ccagatgtagccgcagctgggcgttcatccagtacttccagctccggctcctccagcagc
gacagccgcagcagcagcccggagccgcagaggagtgccgagcgcaagcccggcccactg
acccttctggcccgcaaaatggagtcagaaggtgctttctctggagcaggttggcaccgt
gccgccggtgttgaaggcgatggcagagggcctttagagggtctggtttctgccataact
cacacagccaatgcggcagggcacatgtcattttccacaattccaggcatcccaggagca
tatccggcccatattcaagcacccgtgagtgtgctcaaggccaccgcaacagaagagagg
gacagagagagggactctcagttagaaagagaaaaggcccttgagctggaaaggcaagag
aaacagagaaaagagcaggccatggaggaagagcgggaaagggcctttgcactggcttta
gaaagagaggaacgagaaaaggctttgcagcgcgagagagagcttgctctagagcgagag
agacaggtgagggaactcgctttggctaaagagagggaagagcgagagcgagccttcgca
caagagctggagagacagaggtccctggagcaggagcgtctgcagagagaaaggaaagag
agggagaagcgagagagggaagaaatggagagggccatagagcaggaaagagccagggct
ttagagcaggaaaggaaagagagagaaagggctctggagcaagagaggctacagagggaa
cgagctctggaggctgagaggattgagagagaaatggctttggagcaggagaggctggaa
agggaaaggtttgagagggagaaagccttagagcaagagagactggagagggctctggag
caggagagactcgagagggagaaagccatagagaaggagagaagagaaagagctatagag
caggaaaggttggagcgggagagagcccaagagcaacagaggttggcgctcgagagaaag
gaaaaggagataatcgagagagagaaagtgttgcagcaagaaaggaaagagagggaaagg
gcattggaacaggagaggaaggagaaggagagatttgaagctctggaacaggagaggaag
gagaaggagagatttgaagctctggaacgggagaggaaggagaaggagagatgtgatgct
ctggaacaggagaggaaggagaaggagagatttgaagctctggaacaggagaggaaggag
aaggagagatttgaagctctggaacgggagaggaaggagaaggagagattggaagctctg
gaacaggagaggaaggagaaggagagatatgaagctctggaacgggagaggaaggagaga
tttgaagctctggaacgggagaggaaggagaaggagagattggaagctctggaacaggag
aggaaggagaaggagagatttgatgctctggaacgggagaggaaggagaaggagagattt
gaagctctggaacgggagaggaaggagaaggagagatttgatgctctggaacaggagagg
aaggagaaggagagatttgaagctctggaacgggagaggaaggagaaggagagattggaa
gctctggaatgggagaggaaggagaaggaaagagccgaaaaagaaaggctggacagggag
aaggctttagagcaggagagactcgagaaggagaggcttgagagggagaaagctcttgag
caggagaaactcgagaggaaggagaaggagagggctctggaacacgagaagctagaaaag
gagaaatccttgcagaaagaaaaggaggagcaggagacagccttggaacagaagaaagag
agggctagaatggccgaaaaggagagggaaagtcacctccctccgttgaaacgcggccgc
gagcttggtttcacctccctgcccactcctaccctcctctccactggaccggccgcaaag
tcatcggcagaggaaggcgagaaggtagatgcccatgctaaatccagcatctcaccaaca
cctctgtcgcctcagtccacattcaagaagttccgcttccaacgggagcccccaattcaa
tcgtcctcgccttccatggtcatcaagcggccccgtaacttctcagacaccccccagccc
cgggccttaaccgtctctgcgctaacagaagtttcacagcaggaaggactcaagtcctcc
accgaacaggaaggcccacagaaaaagcaggaggttgctgccaaggcgcccgagaaggag
accacgagtcccaaaaaagaagaggcaaaaagtcttgtattggcggacaaagaaaaagtg
gattcagcaaagatcgagacagaatatgcagctaaggaagtggacaaaagcaagggtcca
agagaggatactgcaccgcgtaggggaagagagacaaagaaggacgaaaaacatgcaagg
aaacgatcatcgtctaatgactcctcctcctcagaatccgactctgggtcttcatcgtcc
ggctcctccagctcatcaacatcctctagagagaaaacccgtgacactacaaggggtaaa
agggaagagaaacctaaaaaagatcaggctcagggcataaaggaaacaccaaaagtctcc
ccgagcaaaggagggtcgtctgtagagaagagaaacgtaactgctgatgaagaaggccac
aacaagaaacctttcattgaagcaccgaccggagaggagccccaaagaaagaaaaaggac
aacgacagagagaaggaaacagacaaacaaaggcaggtgaaggagactgccatggcagag
ccagagaagcttccagagaccagcgaggagacaccaaaggccttctcaactcgtaagatc
tccatcagcagcagtaaatcgtccccgggcaccggcggtgcagagggcgagcaggactct
ggggctgcagccgggcgcaagaggaggtggggatccagcacagccgtcaccgccaagaaa
ccttccttcagcatcaccacggagtcactgaagtctctgatcccagacattcgtccgtgc
ctcggtcaggaggccgtagtggacctgcacccagaggaagccgccctctccggtgctgag
gaagaagagagggagcgctctgaccaggacctacagatcagacgaaccgtcacacaggtg
gtgcacccggagagccaggagaatggacagaaggaggtgaagaggagcaaacacgaggac
tcggaggaggaggatgtgcagggagacaaagagaggacaagagcgcacgaggagaaggac
aggaacgtgatggaaacccagtctccatcacacaccagccgtgacgtagaaatgaacact
gtgaccccaggcgacaccctcatccgtcgctccatcagccagcagaaaacgggtgtttcc
atcacaatcgatgaccctgttcgcacggcccggcagccctcaccaccccgcggcaaagtc
tccagcatcgttcacatcagcaacctggtgaggccattcactctggggcagctgaaggag
ctgctcagcagaaccggcaccctggtggaagagggcttctggatcgacaaaatcaagtct
cactgcttcgtcacctactgcagctcagaggaggccgtcgctactcgtgcagctctccac
ggggtgaaatggcctcagagcaacccaaaagtccttagtgtagacttctgccagcaggat
gagttggacttccaaaaaggcttggccaaccgacccggagcagaggagcgcggccgagcg
tccggcctgccctctctcttccccgagcgagaacagtgggccgagcgcgagcgagagatg
gagcgccgagagaaggccagggcggagcgggagtgggaccgcgacaaggtccgagacttc
gggaaacccggcgaggagaaggagggagacccccagaggtcactctccaaagagaaacgc
cgcaaagagagggcagagggcaaggaaaagaagtctgagaagaaagataaaacagctgag
gatccccctgcaaagctgcttgatgatcttttccgcaaaactaaagcagctccttgcata
tactggcttccacttacagacgacaatatcgctcaacgggaagctgccagggcagaacgg
atgaaggtgcgcgagacacggaggaaggagcgagatgaggaggaggagttgaaaaaaagg
gaagaggagcgcaaggagagggtgaaacctgcaggcggccaaaccgcagagcggagcgag
ggtgagaaagagaaggagaaagagaaggagaaagagaaggagaaggagaagagcagggac
agagagagagacagaggtagggagaacgacaaacggagggatggttaccgtaggccagaa
ggccgcggggctggcgggggccgacgctcccgcagccgcagcgaccctcgagacaggcgg
cgttaa
DBGET
integrated database retrieval system
