Gymnodraco acuticeps: 117556831
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Entry
117556831 CDS
T09661
Name
(RefSeq) collagen alpha-2(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04510
Focal adhesion
gacu04512
ECM-receptor interaction
gacu04518
Integrin signaling
gacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117556831
04518 Integrin signaling
117556831
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117556831
09142 Cell motility
04820 Cytoskeleton in muscle cells
117556831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117556831
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117556831
Exosome [BR:
gacu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117556831
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117556831
Hyaluronan
Extracellular matrix or blood plasma proteins
117556831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
117556831
NCBI-ProteinID:
XP_034088271
UniProt:
A0A6P8VDF6
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MAMISGFIFLWMLQAAVPQGLTPRGPRPIPGPGDSPGPTPPPLPPIPRPEGCNTGIIECP
IKLFFTLDTSESIALQESPPGSLVRKVLEFTKMFAQKLDDEEYRGQIQISWSIGGLNFSE
TQHVFSQFTTKENFIRNLNGIIYKGRGTHTDCAIRKMTHHMTTHYSQKKAVLFSVVITDG
HVTAEKCGGIKAEADKAREKGIQIFSVAASRSVDELGLRDIVGSPTELYRDDYIAVDIAD
GKPEIKTESIDRIIKIMKYQAYLQCFEHKCFQTPGIHGLIGQKGPKGMKGDRGHTGPRGA
NGQLGDPGIEGPIGQPGSKGEIGSKGDKGEIGSGGAKGVAGGPGMNGTDGQKGKMGRIGA
PGCKGDSGDKGPDGYHGDVGDTGPHGDNGTKGDGGLPGKSGPSGPSGDQGPKGEDGNAGN
PGLPGEKGPSGSPGTRGPRGEGGRRGDSGTKGGPGKNGLKGEKGELGPEGLRGRPGEDGL
KGAKGDLGLPGPRGQPGETGSPGANGSLGNQGDLGPRGDSGPPGPKGDNGRTGFNYPGSR
GSTGDRGDPGRRGPRGGRGDCGAKGELGNKGTPGGPADPGQPGEPGKRGPRGNPGSDGDQ
GPVGDPGLNECDVMTYIRETCGCCDCEKHCGPLDIVFIIDSSESVGLTNFTLEKNFVINT
INRLGSMANDPASLTGTRVGVVQFSHNGTFEAIRLNDPKINSMSAFKTAVKNLEWIAGGT
FTPSALKFAYDNLIRDGKRAQAKVSVVVITDGRYDPRDNENLLQYLCNNDDVVVNAIGVG
DMFDKTQDNEILGSIACNKKERVTGMRRYADLVAEDFIQTMEAVLCPNPVVVCPDLPCKS
EPDVAPCVQRPVDLVFLLDGSERLGTENFRYVREFLQKAADRLSLAASKTDRMRARLALI
EFGKENENLVAFPLTHDPTVIANGIAGLRYMDSSSSVGPAIIHTIDTVLGKRNARLTRRN
AEVSFVFITDGVTDSKNLDEAVSAMRGSQVVSTVVTTRSDVDQKVLMKLAMDDRDAIFKV
KDFADMSQSSLFDRFVQWVC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatttcagggtttatctttctgtggatgctccaagctgcagtccctcagggt
ctgacacctcggggacccaggccgatacctgggccaggggacagtccgggaccgactcct
cctcctctgccgcccatacccagacctgaaggttgtaacactgggatcattgagtgtccc
atcaagctatttttcaccctggacacctcggagagcatcgctttacaggagtccccgcct
gggagcctggtgagaaaagtcctggagttcaccaagatgtttgcccaaaagctggacgac
gaggagtacagaggtcagatccagatctcctggtccataggaggcctgaacttctccgag
acgcagcatgtcttcagtcagttcacaacaaaggagaacttcatcaggaacctcaacggg
attatatacaagggcagaggcacgcacacagactgcgccatcaggaaaatgactcaccat
atgaccacccactactcccagaagaaggccgtcctcttctcggtggtcatcaccgacggg
catgtgacagcagagaagtgtggagggataaaggcggaggcagacaaagcccgcgagaaa
gggatccagattttctcagtggccgcgtccaggagcgtcgatgagctggggttgagggac
atcgtcggctctcccactgaactgtaccgagacgactacatagccgtggacatcgctgac
gggaaaccagagataaagacggagtccatcgatcgtatcataaaaatcatgaaatatcaa
gcctacttacagtgttttgaacataaatgctttcaaactcctgggatccatggactgata
gggcaaaaaggtccaaagggtatgaaaggagacagaggtcatactgggccaagaggtgca
aatggtcagctgggcgatcctggcattgaaggtccaatcggacaacctggttcaaaggga
gagattggttcaaagggtgacaagggggaaatcggatcaggtggagcaaagggtgtggca
ggaggacctggtatgaatggaactgatggtcaaaagggtaaaatgggacgaatcggagct
cctggttgcaaaggggattcaggtgacaagggaccagatggttaccatggagatgttggt
gacactgggccacatggtgacaacggaacaaagggtgacggaggacttccaggaaagtca
ggtccctctggccctagtggagaccaaggaccaaagggtgaagacggaaatgctggaaat
ccaggactgcctggagaaaagggaccttcggggtctcctggaacacgtggaccaagaggc
gaagggggaaggagaggagactctggaacaaaaggagggccgggtaaaaatgggctaaag
ggagagaagggcgagctagggccagagggactcagaggccggccaggagaagatggacta
aagggcgcaaagggagatctagggctcccaggaccgaggggtcagcccggagaaacgggc
agccccggagcaaacggcagccttggaaatcaaggagatctaggaccaaggggagactct
gggccccctggaccaaaaggtgacaacggaagaacaggattcaactaccctggatcgaga
ggatccactggagacagaggggatcccggtagaagaggacccagggggggaagaggtgat
tgtggggccaaaggagaacttggaaacaaaggaacaccaggagggcctgcggacccaggt
cagccgggtgagccaggaaagagaggacccagaggaaaccctggatctgatggcgaccaa
ggaccagtgggcgaccctgggctcaatgaatgcgatgtcatgacttacatcagggagacg
tgtggttgttgtgactgtgagaagcactgtggacctctggacattgtatttataattgat
agctcagagagtgtggggctgacaaacttcaccctggaaaagaactttgttatcaacacc
atcaacaggctgggatctatggcaaacgatcctgcgtcattaaccggcacaagagtcgga
gttgtacaattcagtcacaacgggacctttgaagccattcgtctcaatgaccccaaaatc
aactccatgtctgcttttaaaacagcagtgaagaacctagagtggattgccgggggcacc
ttcacaccctcagccctcaagttcgcctacgacaacctcatcagggacggcaagcgagcc
caggccaaagtatctgtggtggtgatcacagatggccgctatgacccgcgcgacaatgag
aatctgctgcagtacctttgcaacaatgacgatgtggtggtgaatgcgattggggttggt
gatatgtttgacaagacacaggataatgagatcctggggtcgattgcgtgcaacaagaag
gaacgcgtcactgggatgaggcgttacgctgacttggtggctgaggactttatacagaca
atggaggctgtgctttgtcccaatcctgtggttgtgtgccctgatcttccctgtaaaagc
gaacctgatgtagctccgtgtgtccagcgaccagtggatctggtatttttactggatggc
tcagagcgcctggggacggagaacttccggtatgtccgtgaatttctacaaaaggcggca
gaccgactgagtctggctgcgagcaagactgatcgaatgcgagctcgcttggcactgata
gagtttggtaaggagaacgagaacctcgtggccttccctctcacacacgaccctactgtt
atcgccaatggcatagcaggcttgcgatatatggattcttcttcgagcgtagggccggcc
atcatccacaccatcgacacagtcttgggtaaaagaaatgctcgcctgacaagacgcaac
gcagaggtttcatttgttttcatcacagacggcgtcactgacagcaaaaacctggacgag
gcagtcagtgcgatgcgcgggtcacaggtggtctccacagtggtaaccacaagaagtgac
gttgaccaaaaagtcctaatgaagctcgccatggacgaccgggacgccatctttaaagta
aaagactttgcggatatgtcccagtccagtttgtttgaccgtttcgtccagtgggtgtgt
taa
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