Gymnodraco acuticeps: 117556869
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Entry
117556869 CDS
T09661
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117556869 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gacu03041
]
117556869 (prpf40a)
Spliceosome [BR:
gacu03041
]
Complex A
U1 snRNP components
U1 related factors
117556869 (prpf40a)
Complex B
117556869 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
117556869
NCBI-ProteinID:
XP_034088328
UniProt:
A0A6P8VSV1
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MMGPPGIPPHYPPLGMPPMGQRPPSMTPMPPGIMPPMGAPPMGQMPGMMPPMMPGMMMPP
RMPSAAVQPTGPPGVDSAAAAPGTASTTNGSPHEDQLKKKSLWTEHKSLDGKTYFYNTET
KQSTWEKPEDLKSPAEQMLSKCPWKEYKSDVGKPYYYNSQTKESRWTKPKDLEDLEAMIK
AEENGTAEAMAPGTTAAPADNAAAMATVMEVEAATAVSEELLAQAAMHQTAEVKTSDAHV
APSELSATTELTASVEVIKEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQA
MKMIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHDKMT
STTRYKKAEQMFNEQEVWSCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNIL
DNMANVTYSTTWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQK
TLLRERRRQRKNRESFQKFLDELHDHGHLHSMSAWMEMYPTLSSDIRFANMLGQPGSTPL
DLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTSFEDFGSVISSDKRATTLDAGNIK
LAFNSLLEKAEAREREREKEEARKMKRKEATFKNMLKLATPPLEPETTWEGVRDRFLKDS
AFEDVTLESERKRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGGSESEDD
EYHKKKKRSQSKSPSERSSSGESERSYKKSKKHKKKGKKRRHKSGSPDTDTEKKGRERDG
KREKDLEKDKENDKSRGKPRSDSKQKSPKRKPVKEEGGWDTSGSELSEGELEKRRRTLLE
QLDAP
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaccaccaggaataccgcctcattacccacccctcgggatgcctcccatggga
cagcgtccgcccagcatgactcctatgcctcctggtataatgccaccaatgggggcccca
ccaatgggacagatgccaggcatgatgcctcccatgatgccagggatgatgatgccccct
cgcatgccatctgcggctgtacagccaacgggaccgcctggtgttgactccgcagctgct
gcacctggaacagctagtaccacaaatggatctccacatgaagatcagttaaagaagaag
tccctgtggacagaacacaaatctctggatgggaagacctatttttacaatacagaaacc
aagcagtccacatgggagaaaccggaagatctcaaatctcctgcagagcaaatgctgtct
aaatgcccctggaaggagtacaagtcggacgtagggaagccttactattacaactctcag
acgaaggagtccagatggaccaaacccaaagacctggaggatctggaagctatgatcaaa
gcagaggagaatggcacggcagaggccatggctcctggcaccacagcagctcctgcagat
aatgcagccgctatggcaaccgtaatggaggtggaagctgcaacagcggtctcagaggag
ctattggctcaggctgccatgcatcaaacagctgaggtcaagacttcagacgcacatgtg
gctccctctgagctctccgccaccacagagctcacagccagcgttgaagtcataaaagaa
gaacggccagagcttcagaagaaaacgtacaaatggaacacgaaagaggaagccaagcag
gcgttcaaagagctgctgaaggagaagggtgtgtcctcaaactcctcctgggaacaggct
atgaaaatgattatcaatgatcctcgctacagcgcacttcccaaactgagtgagaagaaa
caggcattcaatgcctacaaagtccaaacggagaaggaagagaaggaagaggccaggatt
aaatacaaggagtccaaagagaccttccagaggttcttggagaaccacgacaagatgact
tccaccaccagatacaagaaagcagaacagatgttcaatgagcaggaggtgtggagctgc
gtaccggagagagacaggctggagatctacgaagacgttctgttctacctcgctaagaag
gagaaggagcaagccaagcagttgagaaagagaaactgggaagctctgaagaacattcta
gacaacatggccaacgtgacatacagcaccacctggtcggaggcgcagcagtacctgctg
gacaaccccaccttcgctgaggacgaggagctgcagaatatggacaaagaggacgccctc
atttgttttgaggagcacatccgggcgctggagaaggaggaagaggaggagaaacagaag
actcttctcagggagaggagacgacagcgcaagaacagagagtctttccagaaattcctg
gacgagctccacgaccacggtcatctccactccatgtccgcctggatggagatgtacccg
accctgagctctgacatccgcttcgccaacatgctgggccagccgggctccactccccta
gatctgttcaaattctatgtggaagacttaaaggcgcgctaccatgacgagaagaggatc
atcaaagatattctgaaggacaaaggcttcctggtggaggtgaacaccagcttcgaggac
tttggctccgtcatcagctcagacaagagagccaccacgctggacgcagggaacatcaag
ctggctttcaacagtttactggagaaggctgaagccagagagagggagcgagagaaggag
gaggccaggaagatgaagaggaaagaagcaaccttcaaaaacatgctgaagctggccacc
ccccccctggagcccgagaccacatgggagggagtccgagacagattcctgaaggactct
gcgttcgaagacgtgactctggagtcggagaggaagaggatattcaaagacttcatgcat
gtcttagagcatgaatgccaacaccaccactccaagacaaagaagcactctaagaagtcc
aagaagcaccacaggaagcgctcccgctctcgatcgggcggctcagagtctgaggacgat
gaataccacaagaagaaaaagaggtcgcagtccaagtctccttctgagcgctcgtcttct
ggagaatctgagagaagctacaagaaatccaagaagcacaagaagaagggaaagaagagg
cgccacaagtctggatcgccagacactgacactgagaagaaagggagagagcgcgacggg
aagcgggagaaggacttggagaaagataaagagaacgacaagtcccgagggaaacctcgc
tcggactctaaacagaagtcccctaaaagaaaaccagttaaggaggagggcggctgggat
acgtcaggcagcgagctgagtgaaggagagctggagaagaggaggagaactttactggag
cagctggatgccccctga
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integrated database retrieval system
