Gymnodraco acuticeps: 117556970
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Entry
117556970 CDS
T09661
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117556970
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117556970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
RuvA_C
Motif
Other DBs
NCBI-GeneID:
117556970
NCBI-ProteinID:
XP_034088503
UniProt:
A0A6P8VT72
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSIHHVFYADEKRPKCSRMDQTLPSQSPASDLLDADSEELSLRVDFFRKLGYSSAEVRAA
LKKLDLNTDTNSVLGELVRSRTGTAPCGSDSEDRSQKDPLLPPSWAVGPSRITQKPVEWN
HSDAELRPIVIDGSNVAMSHGNKEVFSCRGIQLAVNFFLDRGHNTITVFVPTWRKEQPRP
DAPITDQHFLMELEKRKILVFTPSRRVGGKRVVCYDDRFIVKVAYESDGVIVSNDTYRDL
QGERPEWKKCIEERLLMFSFVNDKFMPPDDPLGRHGPSLDNFLRKNPLPTEQKRQLCPYD
KKCTYGIKCKFYHPERSNQSYLSLADELREKAQISTVKEERNARLSPRQHQSDPAHNAFS
YPLDSTKEHTRDRQSPSHPSQVCENTLLYWEDQRKSPNQMPCPVSQCHTDWPGMHSMPSH
YYANVSHEYLDSGLGSYDSQYSDYSHCLSNPNRPRPQQLSALAGPRQAPVHLENNNSSQS
CRCCSHVGPSTVYQQPHGNPDCKGHSQYDSYPPQMFPPIVPPQNSHQHYGGAPHNQQRYW
SDPFQGLPQARTPCSLPSSAHSSHSNSGSYKGQQYHSWGPTHGSPDAFDPQKRMDLRKKL
QAIFNPSQVDTVMEMYPHVTNAEKLAAEILNLKAQRGVF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccaccacgtcttctatgccgatgaaaagaggcccaaatgctccaggatggat
cagacacttcccagccagagcccagcgtctgacctgctggacgccgacagcgaggagctg
agtctcagagtagacttcttcaggaagctggggtactcctcagcagaggttagggctgct
ctgaagaagctcgacctgaacacagacactaactcggtgctgggggagctggttcggagc
aggaccggcacggcaccctgtggctccgacagcgaggacaggagccaaaaagaccctctg
ctgccccccagttgggctgttggaccctcccgaatcacacagaaaccagtggagtggaat
cattcagatgctgaattgagacctattgttattgatggcagcaacgttgctatgagtcat
ggcaacaaggaagtgttctcatgtcgaggcatccagctcgcagtaaacttcttcttggac
agaggtcataataccattaccgtgtttgtcccaacttggcgcaaagagcagcccagacct
gatgccccgataacagatcaacactttttgatggagcttgaaaaaaggaaaatattggtc
ttcactccatcgcgccgtgttggtggtaagcgggtggtttgctatgatgaccgctttatc
gtcaaggtggcatatgagtcggatggagtgatcgtatccaatgacacctaccgtgacctc
caaggagaaagacctgagtggaagaaatgcatcgaggagaggcttctcatgttctccttt
gtgaatgacaagttcatgcccccagatgaccctctgggtcgccatggccccagtcttgac
aacttcctgcggaaaaatcctctgcctacagagcagaagagacagctctgtccttatgac
aaaaagtgcacttacggcatcaaatgtaagttctaccatccagagcggtcgaaccagtct
tacctgtccttggcagatgaactgagagaaaaagcccagatttctactgtaaaagaagaa
agaaatgccagattatcaccaagacagcaccagtccgatcctgctcataatgccttttcc
tatcctctagactctaccaaagagcacacaagagacaggcaaagtccttcacatcccagt
caggtttgtgaaaatacactgctgtactgggaggatcagagaaaaagtcctaatcaaatg
ccctgtcctgtaagccagtgtcacacagattggcctgggatgcactccatgcccagtcat
tactatgccaacgtctctcacgagtaccttgattctggccttggctcttatgacagtcag
tactctgactattcgcattgcctcagtaaccccaacagacccaggccccagcagctaagt
gccctcgccggacccagacaggccccagtgcatttagagaacaacaacagcagccagtct
tgcaggtgctgttcccatgtaggcccctcaacagtttaccagcaacctcatggaaaccca
gactgcaagggtcattcccaatatgacagctaccctcctcaaatgttcccgcctattgtg
cctccccaaaacagccatcagcattacggtggagccccgcataatcagcaaagatactgg
tcggatccatttcaggggttgccccaagccaggacaccgtgtagtctcccctcttcggcc
cactcctcacactccaacagcggctcttacaaaggccagcagtaccactcctggggccca
acgcatggatcccctgatgcgtttgacccacaaaaaaggatggatctccgtaagaaactg
caagccatcttcaaccccagtcaggtggataccgtcatggaaatgtatcctcatgtgacg
aatgcggagaaactggctgcagaaatcctcaacctgaaggctcagagaggggttttctga
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