Gymnodraco acuticeps: 117557752
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Entry
117557752 CDS
T09661
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1
KO
K17890
autophagy-related protein 16-1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04136
Autophagy - other
gacu04140
Autophagy - animal
gacu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117557752 (atg16l1)
04136 Autophagy - other
117557752 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117557752 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117557752 (atg16l1)
03029 Mitochondrial biogenesis [BR:
gacu03029
]
117557752 (atg16l1)
Membrane trafficking [BR:
gacu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117557752 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
117557752 (atg16l1)
Mitochondrial biogenesis [BR:
gacu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117557752 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_HPS5
TolA_bind_tri
DUF4875
DUF6049
Motif
Other DBs
NCBI-GeneID:
117557752
NCBI-ProteinID:
XP_034089619
UniProt:
A0A6P8VRD1
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MEQCVWRRHVSDQLKQRDRVQRQAFEELIHQYTRLLEKSDLQAVLSERYQADKYELQRGH
EGGSDGSLQQEVSLMRIRHQEELTELHKKRGELAQNVIELNNQIQQKDKLIQSNEAKMLQ
YQQQISGLEGDCRDLRGLLQDLERANQTLKDEYDALQITFCALEEKLRKTSEDNQELVCR
WMAEKSQEANKLNAENEKDTRRRQAKLQKELADAAKEPLPIDPDDDIEVLAEEAGKGGGE
TSPSRALSRTPSKKTSQPPPGGLLDSISSIFGRRAHPYSSSPEGSEAPSGVCAEVRVPTT
AIHVFDAHDGEVNAVSFSPGSRLLATGGMDRKVKLWEVVSGRCEPKGSLTGSNAGITSIE
FDSAGSFLLAASNDFASRLWTVEDSRLRHTLTGHSGKVLSARFLLDNTRIVSGSYDRTLK
LWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESMVQELQLQGRVTS
LDLNHDRTELLSCSRDDLLNIIDLRTVSVRHTLSAQGFKCGADWTRVTFSPDGCYVAGGS
ADGALYIWNVLTGKVERTLDRSHSSAINSVSWSPSGAYVVSVEKSSKAILWSDM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgtgtggaggagacatgtctccgatcagctgaagcagagagaccgagtc
cagagacaagccttcgaggagctcatccaccagtatactcgtctcctggagaagtcagac
ctgcaggccgtcctctctgaaagatatcaggctgataaatatgagctgcagcgaggacac
gagggcgggtcagacgggtcgctgcagcaggaggtgtctctgatgaggatcagacaccag
gaggagctgacagagctgcacaagaagagaggagagctggctcagaatgtgatcgaactg
aacaaccagattcaacagaaagacaagttaatccagagcaacgaggccaagatgttgcag
taccagcagcagatctccggcctggagggggactgtcgggacctcaggggcctcctgcag
gacctggagcgagccaatcagacgctgaaggacgagtacgacgccctgcagatcaccttc
tgcgctctggaggagaagctgaggaaaacatccgaagacaatcaggagctggtctgccgc
tggatggctgagaagagccaggaggccaacaagctgaacgctgagaacgagaaggacacc
aggcgcagacaggctaagctgcagaaggagctggccgacgccgccaaggagccgctgccc
atcgacccagacgacgacatcgaggttctggcagaggaggctgggaagggggggggggag
acgtctcccagcagggcgctcagcaggacccccagtaagaagacatcccagcccccccct
ggtggtctgctggactccatctccagcatctttgggcgcagagcccacccctacagctcc
tctcctgaaggatcagaagctccgtcaggtgtgtgtgctgaagtccgggtccccaccacg
gccatacatgtgtttgatgctcatgacggagaggtaaacgctgtgagctttagtcccggc
tcccgtctcctagcaaccggagggatggaccgcaaggtgaagctgtgggaggtcgtctcc
ggtcgctgtgagccgaaaggttcactgacgggcagcaacgcgggaatcaccagcatcgag
tttgacagcgcaggctccttcctgctggcggcgtccaatgactttgcgagtcgtctgtgg
accgtagaggactcccgtctgagacacaccctgaccggtcacagtggaaaggtgctgtca
gctcgattcctattggacaacactcgcatcgtctccgggagctacgaccgtaccctcaaa
ctgtgggacctccgcagcaaagtctgtatgaagacagtgtttgccggctccagctgtaac
gacatcgtctgcacggagcagtgtgtgatgagcggacacttcgacaagaaggtccgattc
tgggacatcagggcagagagcatggtgcaggagctccagctccagggtcgggtcacgtct
ctggatctgaaccacgaccgcactgagctgctcagctgctccagagacgacctgctgaac
atcatcgacctgaggaccgtcagcgtgagacacacactcagcgctcagggcttcaagtgt
ggagcagactggaccagagtgaccttcagtcctgacggctgctacgtggcgggggggtca
gcagacggcgctctctacatctggaacgttctgacggggaaggtggagcggactctggac
cggagccacagctctgccatcaactcggtgtcctggtcgccgtcaggagcgtacgtggtc
agcgtggagaagagcagcaaggccatcctgtggtccgacatgtga
DBGET
integrated database retrieval system
