Gymnodraco acuticeps: 117557752
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Entry
117557752 CDS
T09661
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1
KO
K17890
autophagy-related protein 16-1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04136
Autophagy - other
gacu04140
Autophagy - animal
gacu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117557752 (atg16l1)
04136 Autophagy - other
117557752 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117557752 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117557752 (atg16l1)
03029 Mitochondrial biogenesis [BR:
gacu03029
]
117557752 (atg16l1)
Membrane trafficking [BR:
gacu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117557752 (atg16l1)
Others
Rab GTPases of specific organelles
Auto phagosome
117557752 (atg16l1)
Mitochondrial biogenesis [BR:
gacu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117557752 (atg16l1)
BRITE hierarchy
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
NBCH_WD40
eIF2A
Med28
DUF6049
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
117557752
NCBI-ProteinID:
XP_034089619
EnsemblRapid:
ENSGAUG00000003952
UniProt:
A0A6P8VRD1
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MEQCVWRRHVSDQLKQRDRVQRQAFEELIHQYTRLLEKSDLQAVLSERYQADKYELQRGH
EGGSDGSLQQEVSLMRIRHQEELTELHKKRGELAQNVIELNNQIQQKDKLIQSNEAKMLQ
YQQQISGLEGDCRDLRGLLQDLERANQTLKDEYDALQITFCALEEKLRKTSEDNQELVCR
WMAEKSQEANKLNAENEKDTRRRQAKLQKELADAAKEPLPIDPDDDIEVLAEEAGKGGGE
TSPSRALSRTPSKKTSQPPPGGLLDSISSIFGRRAHPYSSSPEGSEAPSGVCAEVRVPTT
AIHVFDAHDGEVNAVSFSPGSRLLATGGMDRKVKLWEVVSGRCEPKGSLTGSNAGITSIE
FDSAGSFLLAASNDFASRLWTVEDSRLRHTLTGHSGKVLSARFLLDNTRIVSGSYDRTLK
LWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESMVQELQLQGRVTS
LDLNHDRTELLSCSRDDLLNIIDLRTVSVRHTLSAQGFKCGADWTRVTFSPDGCYVAGGS
ADGALYIWNVLTGKVERTLDRSHSSAINSVSWSPSGAYVVSVEKSSKAILWSDM
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgtgtgtggaggagacatgtctccgatcagctgaagcagagagaccgagtc
cagagacaagccttcgaggagctcatccaccagtatactcgtctcctggagaagtcagac
ctgcaggccgtcctctctgaaagatatcaggctgataaatatgagctgcagcgaggacac
gagggcgggtcagacgggtcgctgcagcaggaggtgtctctgatgaggatcagacaccag
gaggagctgacagagctgcacaagaagagaggagagctggctcagaatgtgatcgaactg
aacaaccagattcaacagaaagacaagttaatccagagcaacgaggccaagatgttgcag
taccagcagcagatctccggcctggagggggactgtcgggacctcaggggcctcctgcag
gacctggagcgagccaatcagacgctgaaggacgagtacgacgccctgcagatcaccttc
tgcgctctggaggagaagctgaggaaaacatccgaagacaatcaggagctggtctgccgc
tggatggctgagaagagccaggaggccaacaagctgaacgctgagaacgagaaggacacc
aggcgcagacaggctaagctgcagaaggagctggccgacgccgccaaggagccgctgccc
atcgacccagacgacgacatcgaggttctggcagaggaggctgggaagggggggggggag
acgtctcccagcagggcgctcagcaggacccccagtaagaagacatcccagcccccccct
ggtggtctgctggactccatctccagcatctttgggcgcagagcccacccctacagctcc
tctcctgaaggatcagaagctccgtcaggtgtgtgtgctgaagtccgggtccccaccacg
gccatacatgtgtttgatgctcatgacggagaggtaaacgctgtgagctttagtcccggc
tcccgtctcctagcaaccggagggatggaccgcaaggtgaagctgtgggaggtcgtctcc
ggtcgctgtgagccgaaaggttcactgacgggcagcaacgcgggaatcaccagcatcgag
tttgacagcgcaggctccttcctgctggcggcgtccaatgactttgcgagtcgtctgtgg
accgtagaggactcccgtctgagacacaccctgaccggtcacagtggaaaggtgctgtca
gctcgattcctattggacaacactcgcatcgtctccgggagctacgaccgtaccctcaaa
ctgtgggacctccgcagcaaagtctgtatgaagacagtgtttgccggctccagctgtaac
gacatcgtctgcacggagcagtgtgtgatgagcggacacttcgacaagaaggtccgattc
tgggacatcagggcagagagcatggtgcaggagctccagctccagggtcgggtcacgtct
ctggatctgaaccacgaccgcactgagctgctcagctgctccagagacgacctgctgaac
atcatcgacctgaggaccgtcagcgtgagacacacactcagcgctcagggcttcaagtgt
ggagcagactggaccagagtgaccttcagtcctgacggctgctacgtggcgggggggtca
gcagacggcgctctctacatctggaacgttctgacggggaaggtggagcggactctggac
cggagccacagctctgccatcaactcggtgtcctggtcgccgtcaggagcgtacgtggtc
agcgtggagaagagcagcaaggccatcctgtggtccgacatgtga
DBGET
integrated database retrieval system
