KEGG   Gymnodraco acuticeps: 117558033
Entry
117558033         CDS       T09661                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03013  Nucleocytoplasmic transport
gacu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117558033 (thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    117558033 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117558033 (thoc6)
   03041 Spliceosome [BR:gacu03041]
    117558033 (thoc6)
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117558033 (thoc6)
Spliceosome [BR:gacu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117558033 (thoc6)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40_WDHD1_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP NBCH_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_IP5PC_F Beta-prop_NOL10_N WDR54 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 117558033
NCBI-ProteinID: XP_034089884
UniProt: A0A6P8VHR7
LinkDB
Position
Unknown
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDATALSQKPVLTFTAHE
GPVFSLLSTDCHLLSAGNGEISCWSWSDLTKKNVKPLWTKRPNFKSSLEIPEINAMVLNT
RDNSLVVGGGDNNIHILDLEHGIFKAVLQGHSDYVHCLSVREREAEILSGGEDGAVRMWD
SRTGQSVHCVEIYKYESCARPQYGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LTGCQRQTSFYQDMILAVGEGPSVAHCLLGGEVKAQIPCTPQSLNTLQLNTNSAEHRMLT
VGGSSNHIDVFTNLSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtcccgtagagctcctccacatgtccgtgttctcgcagagtttttctccctgtgga
cgatttctggcagccgggaacaactatggcgagatcgccgtgttcagcctgtctgcagct
ctgagtccagatgccacagccctgagtcagaaacctgttctaaccttcacagctcatgaa
ggacctgtgttctcgctcctctccaccgactgtcacctcctgagcgcaggaaacggagag
atcagctgctggagctggagcgacctcaccaagaagaatgtgaaacctctgtggacaaag
agaccaaactttaaatccagtctagagataccggagatcaacgccatggtcctaaacacc
cgggataacagtctggtggtgggaggaggagacaacaacatccacatactggacctggag
cacggcatcttcaaggcagtgctgcagggacactcagactacgtgcactgtttgagtgtg
agagagagggaggcagagatcctgtctgggggggaggacggagctgtgaggatgtgggac
agtaggacgggtcagtctgtgcattgcgtcgagatctacaagtacgagagttgtgctcga
cctcagtacggtaaatggatcagctgtctgaccaccgactcagactggatgctgtgtggt
ggaggtccgtctctgtctctgtggcatctccgctctctgtccccgacctccatcttccct
ctgacgggctgccagagacagacgtccttctaccaggacatgatcctggctgtgggggag
ggcccgtctgtggctcactgtctcctggggggggaggtcaaggctcagatcccctgtacg
ccacagagcctcaacacgctgcagctcaacaccaacagcgcagagcaccggatgctgacg
gtgggaggcagcagcaatcacatcgacgtgttcaccaacctgtcgtacagagccttctcc
ctcagcttctga

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