Gymnodraco acuticeps: 117558079
Help
Entry
117558079 CDS
T09661
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117558079 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117558079 (hbs1l)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117558079 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
117558079
NCBI-ProteinID:
XP_034089938
UniProt:
A0A6P8VWK3
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDVYGQSVDDDYCISPATANQFIYSRQERQAPREQPLEEEEY
EDDVPMSPTVSLNLDPLDQAKLFSCLDHMRTVLGDAVQDSVLTQAAISCGFDPQKALDAV
LSEDAKTAPVTKSTNEETASAAIASQEKAPLPQRIKKEAVAEKAKSRDVSHNKLDSEVVP
KVARMTISGKKQTMGFDVPSVNGVVGTPERPTAASASEATPKRPETPSKGSNGDEPSTVS
TPGRSGKARQTINIKEELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMH
KYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVVTLMDAPGHKDFIP
NMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNW
QQQRFQDITSKLGHFLKQAGFKDSDVYYIPSSGLSGENLTTRSSVSELTSWYSGPSLMQQ
IDAFKAPQRSVEKPFRLCVSDVFKDQGSGFCVSGKIEAGYIQTGERILAMPPNETCTVKG
ITLHDEPLDWAAAGDHVSLTVTGMDIIKINVGYVFCDPKEPVRVCTRFRARILLFNIEVP
ITQGFPVLLHYQTVSEPATIRKLISILHKSSGDVIKKKPKCLSKGMNAIVEIQTQRPVAL
ELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgaggttataactacgatgaagactttgacgatgatgac
gtgtatggacagtctgtggatgatgactactgcatatcaccagcaacagcaaatcagttc
atctactcacgtcaagagaggcaagcaccaagggagcagccgttggaagaggaagaatat
gaagatgacgtacccatgtcccctaccgtcagcctcaacctagaccctcttgatcaagcc
aaactgttttcctgtctggaccatatgcggactgtgttgggagatgcagtgcaagactca
gtcctgacccaggcagccataagctgtggatttgacccacagaaggccttggatgcagtc
ctctctgaagatgctaagacagccccggttaccaaaagcaccaatgaggagacagcttca
gccgcaatagcaagccaggagaaagcgccgcttccacaaagaatcaagaaagaggccgtc
gctgagaaagctaaaagcagagacgtgtcccacaataaactggactctgaagtcgtcccc
aaagtggcccgcatgaccatctcagggaagaagcagaccatgggcttcgatgttcccagt
gtgaacggtgttgtcgggacccctgaacgccccacagcagcctcggcctccgaggccacg
cccaagcgtccagagactccatctaaaggctcaaatggagacgagccctccacagtttcc
accccgggacgctctggaaaggcccggcagacgatcaacatcaaggaagaactggagaag
aggcagggcggcaaacctctgttaaatttggtggttataggtcacgtggatgcaggtaaa
agcactctgatgggccacctgctttatctgctgggcaacgtcaacaagcgcaccatgcac
aagtatgagcaggagtccaagaaggcgggaaaggcctcctttgcttatgcttgggtcctg
gatgaaactggcgaggagagggacagaggtgtgacgatggatgtgggcatgaccaagttt
gagacggactcaaaggtggtgacactaatggatgcgcccggacacaaagacttcatcccc
aacatgatcacaggagctgcacaggccgacgtggcggtgctcgtggtggacgccagccgg
ggggagtttgaggcaggcttcgaggcaggggggcagaccagagaacacgccctgttggtg
cgctcgctcggcgtcactcagctcgctgtcgctgtcaacaagatggaccaggtaaattgg
caacaacagcgtttccaagacattacttccaaacttggacattttctcaagcaggcagga
ttcaaggactctgatgtttactacatccccagcagcggcctgtcaggagagaacctcacc
accaggagttcagtgtcagagctcacatcctggtactctggccccagcctgatgcagcag
attgacgccttcaaagcccctcagcgatctgtagaaaaaccgttcagactgtgcgtttcc
gatgtgttcaaagaccagggttcaggcttctgtgtttccgggaagatcgaggccggttac
attcagaccggagaaagaatactggctatgccccccaatgaaacctgcacggtcaaaggt
atcactcttcacgatgagcctctagactgggctgcagcaggagaccatgtcagcctgacg
gtcaccggcatggacatcatcaagatcaatgtgggctatgtgttctgtgatcccaaggag
cctgtacgagtgtgtactcggttcagagcccggatccttctcttcaatatcgaggtcccc
atcacacaaggcttcccagtattgctgcattaccaaacagtgagtgagccagccaccatt
aggaaactgataagtattctacacaaaagcagcggcgacgtcatcaagaagaaaccaaag
tgtttgagtaaaggtatgaatgccatcgtggagatccagacgcagaggccggtggcatta
gagctgtacaaagactacaaggaactcggccgcttcatgctcagatatgtcggctccacc
atagctgcaggggtcgtcactgagatcaaagaatga
DBGET
integrated database retrieval system
