KEGG   Gymnodraco acuticeps: 117558643
Entry
117558643         CDS       T09661                                 
Name
(RefSeq) RNA-binding protein MEX3B-like isoform X1
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
gacu  Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117558643
   04121 Ubiquitin system [BR:gacu04121]
    117558643
Enzymes [BR:gacu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117558643
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117558643
Ubiquitin system [BR:gacu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117558643
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 zf-RING_2 zf-C3HC4 KH_DEAH11_2nd zf-RING_4 Prok-RING_4 PmbA_TldD_2nd zf-C3HC4_4
Other DBs
NCBI-GeneID: 117558643
NCBI-ProteinID: XP_034090847
UniProt: A0A6P8WTH9
LinkDB
Position
Unknown
AA seq 672 aa
MPSSTSLLEADEGESEVPPPLVHAFAGMGLEEHHGTQSQNPEQLDESLHYHHLHQLPPVS
HFNLLGTVLDLKPVHQPPSGVEVNIAPEDDELEVGADSLLLAQAHRQQHLPSGPGGSVMP
SGMEPPYAETVLLYNEDGDDIGLGGGALPLAGSMAILPPGMYGESGYEAESSLLARRKSV
NTTECVSVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEQPVFVVTGRKEDVGMAK
REILSAAEHFSLIRASRNKTGPLSAATGTGTPSLPGQTTIQVRVPYRVVGLVVGPKGATI
KRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAKDEIEAHIAIRTGSCGSIEAPGVDNN
DFQYNGTDVSFEHAAAAALGEAGWLRAGASSENGGGGGSLLPMSLNGTQRINSNINSGIR
MSSTYRNDSSSSLGSGSSSADSVYATSNGNRMADLSPTCQFNANANNNNNNSNGGSANFW
FGDSVLPEELVSLGGAGSSSGFDPLTISTAQASHPAAQPPIWSAYVDHQPPQAFDARHSQ
NSLPGTPRLSPTEALEHPQARRVLRGPFVSTGAHDVQRFPSYSSAFSSSSESTASSSSPP
ESSLSHRPGVGPAGRGQEICMHCMDNQVIAALVPCGHNLFCLDCATHICQSPDAVCPVCM
SPVTQAIQLRNI
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgccgagtagcacatctttgctggaggccgacgagggagagtccgaggtcccaccgcct
ctagtgcacgctttcgccggtatgggccttgaggagcaccacggcacccagagccagaac
cccgaacaattagacgagagcctccactatcaccacctccaccagcttccccctgtttct
cattttaaccttctcggtacggtcctagacttgaagcccgtgcaccagccgccttcggga
gtagaagtgaacatagcgcccgaggacgatgagctagaagttggagccgactccttgttg
ctagcgcaggcccaccgccagcaacacctcccatcagggccaggaggctcagtgatgcct
tcggggatggagcctccgtacgccgagacggtcttgttgtacaacgaagacggagatgat
attgggctcggcggcggcgccttaccactggctggcagcatggcgatactaccgcccggc
atgtacggggagtctggctacgaggccgagtcttcgctcttggctcggcgaaagagcgtc
aacacaaccgagtgtgtgtcggtgcccagctccgagcacgtcgcggagattgtgggcaga
cagggctgtaagattaaggcacttcgagccaagaccaacacctacattaagacaccggtg
aggggagagcagcctgtctttgttgtgacggggcgcaaagaagacgtgggcatggctaag
agggagatcctctctgcagctgagcacttctccctcatcagagcctctcgaaacaagacg
ggccctctgtctgctgcgacgggtacagggaccccctctctacctggacagacaaccatt
caggtgcgagtaccatatcgtgttgtagggctggtcgtgggtcccaaaggggcaaccatc
aaacgtattcagcaacagacccacacgtacattgtgacgccaagtcgggacaaggagccg
gtgttcgaggtcaccgggatgccggagaacgtggatcgtgcgaaggatgagatagaggcg
cacatcgccatacgtacaggatcctgtggaagtattgaggctcctggagttgacaacaat
gactttcagtacaatgggacagatgtcagctttgagcatgctgcagcagctgcgctgggg
gaggccggatggcttcgtgcaggtgcatcatctgaaaatggtggcggcggcggcagcctg
ttgccaatgagtctcaacggtactcagcgaatcaatagcaatatcaacagcggtatcagg
atgtcttccacctaccgcaacgacagctccagttccctgggcagcggctccagctcagct
gactctgtctacgccaccagtaatggtaaccgaatggcagatctgagcccgacttgtcag
tttaatgccaatgctaacaacaacaacaacaacagtaatggtggcagtgcaaatttctgg
tttggcgacagcgttcttcctgaggagctggtcagcctgggaggtgcaggctcttcctcc
ggcttcgatccgttaaccatctccactgcccaagcatcgcaccctgctgcacagccaccg
atctggagcgcttatgtagaccaccagcccccacaggccttcgatgctcgtcactctcag
aacagtctgccaggaacgccccggctctctccaacagaagccttggagcaccctcaggcc
aggagagttctccgagggccctttgtctcgaccggggcccatgatgtccagaggttcccc
tcttacagctcggccttctcctcttccagtgaaagcacagcctcctcttcctcccctcct
gaatcctccctctcccaccgcccgggggttggaccagcagggaggggacaggaaatatgc
atgcattgcatggataaccaggtgatcgctgccctggttccctgtggccataacctcttc
tgtttagattgtgccacccatatatgccagagtccagacgctgtttgccctgtgtgcatg
tccccggtcacacaggccattcagctgcgcaacatttga

DBGET integrated database retrieval system