Gymnodraco acuticeps: 117558705
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Entry
117558705 CDS
T09661
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117558705 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117558705 (supt5h)
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117558705 (supt5h)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117558705 (supt5h)
RNA polymerase I system
117558705 (supt5h)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
117558705 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
Spt5-NGN
KOWx_SPT5
Spt5_N
KOW1_SPT5
KOW7_SPT5
KOW5_SPT5
Ribonuc_P_40
DUF150_C
Arabino_trans_N
DUF6406
Motif
Other DBs
NCBI-GeneID:
117558705
NCBI-ProteinID:
XP_034090949
UniProt:
A0A6P8VKC7
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MSDSEDSDFSDNASGSSDGEAEEAEGIEETNSPVGSDKVAEEEGEDLLEEEDEYDEEEEE
DDDERPRKKPRHGGFILDEADVDDEYEDEEDQWEEGAEDILEKAEEAEVSNIDHVVLDED
NSGSRRLQNLWRDSREEALGEYYMRKYAKTSGGEHFAGGSEELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFVAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVKAA
IEGIGNLRMGLWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEP
SQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDGDF
MIFEANRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPDGIDLEVVTESGKEREHN
LQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVK
VIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGEL
VQLDPQTVGVIVRLERETFQVLNMHGKVMTVKHQSVNRRKDNRFAVALDSEQNNIHVKDI
VKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTV
GGFAPMSPRITSPMHHGGGSSPQRGGGGGGGGGGGGGGGGGGMGRGRGRRDNDLIGQTVR
ISQGPYKGETLETLIQIIKVLLFLILNSSGGNEFFKDYFWHLSSCIILYFANI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagcgacttctcggacaacgcgagtggcagcagcgatggagag
gcggaggaggcggaggggattgaggagacgaacagccctgtgggcagcgacaaggtagca
gaggaggagggggaagacctgctggaggaggaggatgaatacgatgaagaggaggaagaa
gacgatgacgagcgcccgaggaagaagccgaggcacggaggcttcattctggacgaagcc
gatgtggacgatgagtatgaggatgaggaggatcagtgggaggaaggagcggaagatatt
ctggagaaagcagaggaagctgaagtgtctaacatcgaccatgtggttctggacgaggat
aactccggatccagaaggctgcagaatctctggagagactccagagaagaggcgctgggt
gaatactacatgaggaaatacgccaagacctctggaggagagcatttcgctggagggtcg
gaggagctttctgatgacatcacacagcagcagctacttcctggagtcaaggatcccaat
ctgtggacggtcaagtgtaagattggagaggagagggcgacggccatcgctctgatgagg
aagttcgtcgcctaccagttcaccgacacgccgctgcagataaagtcggtggtggccccg
gatcacgtgaaaggctacatctacgtggagtcgtacaaacagacgcacgtgaaggcggcc
atcgagggcatcgggaacctgaggatgggtctgtggaaccagcagatggtgccgatcaaa
gagatgaccgacgtgctgaaggtcgtcaaggaggtcaccaacctcaagcccaagtcctgg
gtgcggctcaagagaggcctgtacaaggacgacatcgctcaggtggactacgtggagccg
agtcagaacaccatctctctgaagatgattccccgcatagacctggaccgcatcaaggcc
aagatgagcctgaaagactggttcgctaagaggaagaagttcaagagacccgctcagagg
ctgtttgatgctgagaagatcaggtccctcgggggggaggtcagccacgatggagacttc
atgatcttcgaggcgaaccgttacagccggaaaggatttctgttcaagagcttcgccatg
tctgctgtgatcacagacggagtgaaacccactctctctgagctggagaagtttgaggat
caacctgacggcatcgacctggaggtggtcactgagtcaggtaaggagcgtgaacacaac
ctgcaggctggagacaacgtggaggtgtgtgagggagagctgatcaacctgcagggaaaa
atcctcagtgtggacggaaacaagatcaccatcatgcccaaacacgaagacctgaaggac
cccctggagttcccggctcacgagttgaggaaatatttccgtatgggcgaccacgtgaag
gtgatcgcgggtcgatacgagggcgacaccggcctcatcgtcagggtggaggagaacttc
gtcatcctcttctctgacctcaccatgcacgagttgaaggtgttacccagagacctgcag
ctctgctcggagacggcttccggggtggatgcgggggggcagcacgagtggggggagctg
gtgcagctcgaccctcagacggtcggggtcatcgtccgtctggagagggagacgttccag
gtgctgaacatgcacgggaaggtgatgacggtgaagcatcagtcggtgaaccgcaggaag
gacaaccgcttcgccgtggctctggactcggagcagaacaacatccacgtcaaggacatc
gtcaaggtcatcgacggcccacactcgggtcgcgagggggagatccgtcatctgttcaga
ggattcgccttcctccactgtaagaagctggtggagaacggaggcatgttcgtctgcaag
acccgacacctggtgctggccggagggtcaaagcccagagacgtgaccaacttcacggtg
ggagggttcgctcccatgagtcctcgcatcaccagccccatgcaccacgggggaggaagt
tctccacagagaggaggtggtggaggaggaggaggaggaggaggtggggggggaggagga
ggaggaatggggcggggccgaggacgaagagacaacgatctgattggtcaaaccgtccgc
atctcgcagggtccttacaaaggtgagacactggagacattaatacagattattaaggtg
ttattatttttaatattaaactccagtggtggaaatgaattttttaaagattatttctgg
catttgtcatcatgtatcatactttattttgcaaacatttaa
DBGET
integrated database retrieval system
