Gymnodraco acuticeps: 117558879
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Entry
117558879 CDS
T09661
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117558879
03041 Spliceosome [BR:
gacu03041
]
117558879
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117558879
Spliceosome [BR:
gacu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117558879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117558879
NCBI-ProteinID:
XP_034091242
UniProt:
A0A6P8WUM8
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDGRLDADLYPLGTGYVPELESVHDISVGTKRGSDELFSSCIPTGPYIMNSANGNDSKKF
KGDVRSPGVPSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLEMNSEECA
QTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGVGMG
VGMGGMGMGGMAIPADPAAMGGAGSQSPVLRVIIENLFYPVTLDVLHQIFSKFGTVLKII
TFTKNNQFQALIQYADGLTAQHSKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRD
YTRPDLPTADSQPSLDHQTMQAAAAFAAPGLISASPYGGAHGFPPAFALQQSGLSMPGMP
GLASLGMGHGGMAAAAAAANRLGLSGLTASGGHNVLLVSNLNPESVTPHCLFILFGVYGD
VMRVKILFNKKENALIQMSDCTQAQLAMSHLNGQRLHGRAMRVTSSKHTTVQLPREGHED
QGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPAVVEEDLQRLFASSGSTVKA
FKFFQKDRKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgctgacttgtaccccctgggaaccggctacgtccctgaactc
gaaagtgtccatgacatatcagttggcacaaagaggggatccgacgaactcttttcttcc
tgcatacccactgggccctatatcatgaactcagccaatggcaacgacagcaaaaaattc
aaaggtgacgtgcgcagtcctggtgttccgtcacgagtggtccatgtacgcaagctgccc
aacgacataaatgaagcagaagttattgggctgggactgccctttgggaaggtcaccaac
ctgctgatgctgaaagggaaaaaccaggcattcttggaaatgaacagtgaggagtgtgca
cagacgatggtgagctactactcctctgtcacccccgtcatcagaaaccaccccatttac
atgcaatactcgacccacaaggagctcaagacagacaactcccccaaccaagtgcgtgcc
caggcagctctgcaggcggtcaatgcgctgcatggaggcgggatgggcgtcgggatgggg
gtcgggatgggaggcatgggcatgggaggcatggccatccctgcagatcctgctgccatg
ggaggagcaggctcccaaagccctgtgctcagagtcatcatagaaaaccttttctacccc
gtcaccctagatgttctgcaccagattttctctaagttcggcactgtgctgaagatcatc
actttcaccaagaacaaccagttccaggctctgatccagtatgccgatggcttgacagct
cagcactccaaactgtctctagatggacagaacatctataacgcctgctgtaccctgaga
atcagcttctccaagctcaccagcctgaacgtcaagtacaacaacgacaagagcagagat
tacacccgaccggacctccccactgctgactcacagccctccctcgaccaccagaccatg
caggcagccgctgcgtttgctgctccaggtttgatctcagcctctccttatggtggtgct
catggcttccccccagcctttgccctccagcaatcaggtctgtcgatgcctgggatgccc
ggcctggcctctctgggtatgggccatggtggcatggcggctgctgcagcagctgctaac
aggctgggtctgtcagggctcactgcctctgggggacacaatgtcttgctggtcagcaat
ctcaaccctgagagcgttacgccacactgcctctttattcttttcggtgtgtacggcgat
gtgatgcgagtgaagatcctgtttaataaaaaggagaatgctctgatccagatgtcagat
tgcacacaggctcagctagctatgagccacctgaatggccagcgcctccacggcagggcc
atgcgtgtgacttcatccaaacacaccaccgtgcagcttcccagagagggccacgaggac
cagggcctgaccaaggactacagcaactcaccgctgcaccgcttcaagaagcccggctcc
aaaaattactccaacatcttcccaccctcggcaacactccacctctccaacataccacct
gccgtggtggaggaggacctccagaggcttttcgccagctcaggatccacagtcaaggcc
ttcaagttctttcaaaaggaccgcaagatggccctgatccagatgggctcagtggaggag
gcaatcgagtccctcatcgagttccacaaccacgacctgggagagaaccaccacctcaga
gtgtccttctcaaagtccaccatctga
DBGET
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