Gymnodraco acuticeps: 117558982
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Entry
117558982 CDS
T09661
Symbol
lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
gacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117558982 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
117558982 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117558982 (lsm8)
03041 Spliceosome [BR:
gacu03041
]
117558982 (lsm8)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117558982 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
117558982 (lsm8)
Spliceosome [BR:
gacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117558982 (lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
117558982
NCBI-ProteinID:
XP_034091445
UniProt:
A0A6P8VZR1
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEDTDSSLDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggccctggagagctacatcaaccgaactgtggccatcgtgacgtcagacggc
aggatgatcgtgggcactctgaagggcttcgatcagaccatcaacctgattctggacgag
agccacgagcgagtgttcagctcgagtcagggcgtggagcaggtggtgctgggcctctac
atcgtgaggggggacaacgtggcggtgatcggggaaatcgacgaggacacggactcttcg
ctggatttaggaaacatccgagcagagccactcaactctgtcgcccactga
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integrated database retrieval system
