Gymnodraco acuticeps: 117558990
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Entry
117558990 CDS
T09661
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03030
DNA replication
gacu03410
Base excision repair
gacu03420
Nucleotide excision repair
gacu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117558990 (rfc4)
03410 Base excision repair
117558990 (rfc4)
03420 Nucleotide excision repair
117558990 (rfc4)
03430 Mismatch repair
117558990 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gacu03032
]
117558990 (rfc4)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117558990 (rfc4)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117558990 (rfc4)
DNA replication proteins [BR:
gacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117558990 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
117558990 (rfc4)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117558990 (rfc4)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117558990 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
117558990 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_16
AAA_assoc_2
AAA_11
DUF815
AAA_30
Mg_chelatase
AAA_14
RuvB_N
AAA_24
KH_DUF2096_C
SLFN-g3_helicase
AAA_19
ResIII
AAA_5
Gp44_lid
Cdc6_lid
7TMR-HDED
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
117558990
NCBI-ProteinID:
XP_034091459
UniProt:
A0A6P8VLL4
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTSRPQKDKAAAGPGTEKKAKAVPWVEKYRPKCIDDVAFQEEVVAVLKKS
VEGADLPNLLFYGPPGTGKTSTILAAARELYGPQLYRQRVLELNASDERGIQVVRQKVKN
FAQLTVAGSRQDGKPCPPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLSNQIQEERLLDICEKESLKYSKESIAALVTVSEGDLRKAITFL
QSAARLNMDREITESAIIEIAGVVPPKMIDGLLQICLSGTFEKLEVAVRNMVDEGYAATQ
ILGQLHEAVIEHDLSDKQKSVITEKMAVVSKCLSDGADEYLQMLSLCSVIMQQASQHN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggagcgaccgttcagaccagcagacctcagaaagacaaggca
gcagcggggcccggcacggagaagaaagccaaggctgttccatgggtagaaaaatacagg
ccaaagtgtattgatgatgtggccttccaggaggaggtggtcgccgtgctcaagaagtct
gtggaaggagcagatcttcccaacttgctcttctacggcccccccggaacaggaaagacc
tccaccatcttagctgctgccagagagctttatgggccccagctgtacaggcagagggtg
ctggagctcaacgcctccgatgaacgaggcatccaggtagtcagacagaaggtgaagaac
ttcgctcagctcaccgtggccgggtcacgccaagatgggaagccgtgtcctcctttcaag
atcatcatcctggacgaggcggactccatgacggggccggcccaggcggctctgaggcgc
accatggagaaggagtcccgcaccacccgcttctgcctcatctgcaactacatcagcagg
atcatcgagccccttacctccagatgttccaagtttcgcttcaaacctctgtccaatcag
atccaagaagagcggctgctggatatctgtgagaaggagagccttaaatacagcaaagag
agtatagcagcgttagtgacggtgtctgagggggacctgcggaaagccatcaccttcctg
cagagtgcggcacgcctcaacatggacagggagatcacagagagcgccatcattgaaata
gctggggtcgtccctcccaagatgattgacggcttgctccagatatgtctctcaggaact
tttgagaaactagaggtcgcagtcaggaacatggtggatgaaggctacgcagccacacag
atcctgggtcagctccatgaggctgtcatagagcacgacctgagtgacaagcagaagtca
gtcataacagagaagatggcggttgtgagtaagtgcctgtcggacggtgcggatgagtac
ctgcagatgttgagtctctgttcagtcatcatgcagcaggcctcccagcacaactga
DBGET
integrated database retrieval system
