Gymnodraco acuticeps: 117559088
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Entry
117559088 CDS
T09661
Symbol
dcp2
Name
(RefSeq) LOW QUALITY PROTEIN: m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117559088 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117559088 (dcp2)
Enzymes [BR:
gacu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
117559088 (dcp2)
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117559088 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
117559088 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
Cullin_Nedd8
NUDIX_4
Pedibin
Motif
Other DBs
NCBI-GeneID:
117559088
NCBI-ProteinID:
XP_034091630
UniProt:
A0A6P8W0F0
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MFSSNMETKRVEIPTGMLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAVFHHCPFLLPNGEDVQKILEQXKEYKXVPTFGAIILDESLENALLVQ
GYLAKSGRGFPKGKVNEDEAPHDCAVREVLEETGFDIKNLISKDVFLEQKITDQVVRLYI
IPGVSQDTKFNPRTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPLR
EWIKKLRVNINVPMKTEQKQEQETTHKNIEEDRKILIQAAIVRIMKMRKVLKHQVPVIKK
CIDILIEKEYLEKVDGEKDTYSYLT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctccaacatggaaacaaaaagagtggagatcccgaccggaatgctggacgac
ctctgcagccgcttcatcctgcacatccccagcgaggagagggacaacgctatccgggtg
tgtttccagatcgagctcgcccactggttctatctggacttctgcatgcagaacactccc
ggagctcctcactgtgggatcagagacttcgccaaagcagtgttccatcactgtccgttc
ctgctgcctaatggagaagacgtccagaagatcctggagcagtagaaggagtacaagnna
gtgcctacttttggagccatcattctggatgaatctctagaaaacgctctgctggttcag
ggatacctcgctaagtccggcagaggctttccaaaggggaaagttaatgaggatgaagct
cctcacgactgtgccgtgcgagaagtgctggaggagacgggcttcgacataaagaatctt
atttccaaagacgtgttcctcgagcagaagattacagaccaggtggttcggctctacatc
atccccggggtgtcgcaggacacaaagttcaacccacggacgaggaaggagatcaggaac
atcgagtggtttcctattgagaagctgccatgtcacaggaacgacatgacgccaaagtct
aaactcggactcgcccccaacagattcttcatggccattcccttcataaggccgctgaga
gaatggatcaaaaagctgagggtgaacatcaacgtaccgatgaagacggagcagaaacag
gagcaggagacgacccacaagaacattgaagaggaccggaagattctcatccaggcggcc
atagtgcggatcatgaagatgaggaaggtcctgaagcaccaagtcccagtcatcaagaaa
tgcatcgacatcctgatcgaaaaggagtacctggagaaagtggacggagagaaggacacg
tacagctacctgacctga
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