Gymnodraco acuticeps: 117559417
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Entry
117559417 CDS
T09661
Name
(RefSeq) transcription factor SOX-6-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117559417
Transcription factors [BR:
gacu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117559417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117559417
NCBI-ProteinID:
XP_034092071
EnsemblRapid:
ENSGAUG00000007099
UniProt:
A0A6P8VN58
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MPPLMIPVFPHDQRSLAAAAAAQQGFLFPPSMSYKPGENYPMQFIPSTMAAAAASGLSPL
QLQQLYAAQLATMQMSPGPKMAPLPQAHISSGPLSPSNLKNDKRSSSPITHIKEEGSTQP
LNLSARPKTAEPLRSPTSPTQSLYSGHKTSPSGMGKGRIPSPIANMGRNTSLDILSSLNS
TALFGDQDAVMKAIQEARSMREQIQREQLHQQHPGHHSLEAKLSALSGMSLHNGNKERLH
YETLSQHLGKLGEDAGKMVHRVIDLTRPEDLDGSNITEARVFREARGRNTAEPHIKRPMN
AFMVWAKDERRKILQTFPDMHNSNISKILGSRWKGMTNQEKQPYYEEQARLSKIHLEKYP
NYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFVGPQPPMALSGSSPGGVGVYP
GAITMATTATPSPHLTSDCSSNSASPEPAIPVIQSTYGMKPEPAVGGGRGRALNRPSNRA
NGQEDMDMYADFDEQKSDYSSDHETREAVSAN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctgatgatcccggtgtttcctcacgaccagcgctctctggctgctgccgct
gccgcacagcagggcttcctcttccccccgagcatgtcctacaagccaggtgagaattac
cccatgcagttcattccatctactatggcagctgcagcggcatctggactcagcccatta
caactgcagcagctgtatgccgcccagctggcaaccatgcagatgtccccaggacccaag
atggcccccctcccacaggctcacatctcctccggccccctctccccctccaacctgaag
aacgacaagcgatcatccagtcctatcactcacattaaggaggaaggatccacacagcca
ttgaacctctcagccagacccaagacagccgagcctcttcgctccccgacgtccccgaca
cagagtctgtactccggacacaagaccagcccctcaggcatgggcaagggccgcatcccc
agccccatcgccaacatgggcaggaacacctctctggacatcctgtccagcctcaactcc
acagccctgttcggggaccaggacgcggtgatgaaggccatccaggaggcgcggagcatg
agggagcagatccagagggagcagctccaccagcagcatccgggacaccacagcctggag
gccaagctgtcggccctcagcggcatgagcctgcacaacggcaacaaggagcggctgcac
tatgagacgctgagccagcacctggggaagctcggggaggatgctgggaaaatggtgcat
cgggtgattgacctgacgagaccagaagatctggatggcagcaacatcacggaggcgcgg
gtgttcagggaggctcggggcaggaacaccgcagagccgcacatcaagaggccgatgaac
gccttcatggtgtgggccaaagacgagcggaggaagatcctgcagaccttccccgacatg
cacaactccaacatcagcaagatcctaggctctcgctggaaaggcatgaccaaccaggag
aagcagccgtactacgaggagcaggcccgcctgagtaagatccatctggagaaatatccc
aactacaagtacaagccgcggccgaagaggacctgcatcatcgatggcaagaagctgcgc
atcggagagtacaagcagatgatgaggtcacggcgccaggagatgaggcagttcttcgtg
gggcctcagccccccatggctctcagcggcagcagccccggaggagtaggagtgtacccg
ggcgccatcaccatggcaacaacagctaccccgtccccccacctgacctcagactgctcc
agcaactccgccagccccgagcccgccatccccgtcatccagagcacgtacgggatgaag
cccgagccggcggtggggggcggcagggggcgagccttaaatcggcctagcaaccgggcc
aacggacaggaggacatggacatgtacgcggactttgacgagcaaaagtcagactatagc
agcgaccacgagacacgggaggccgtcagcgccaactga
DBGET
integrated database retrieval system