KEGG   Gymnodraco acuticeps: 117559418
Entry
117559418         CDS       T09661                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117559418 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gacu03019]
    117559418 (exosc6)
Messenger RNA biogenesis [BR:gacu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117559418 (exosc6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 117559418
NCBI-ProteinID: XP_034092075
UniProt: A0A6P8W269
LinkDB
Position
Unknown
AA seq 291 aa
MPDCFPHAVTFPFLCTTMPTDTKRVRGPEVSQSPTLFLCKHVAVLPSHGRRADGRQRDQV
DVRPVFVRCGLVSQAKGSAYIEAGNTKLMCCVYGPREMERKDETDMKCGKLTTDMRFAPF
SCLERGSWIQGSQDKDLSLMLHESLQPAVCLHKYPRSQIEVNVMVLENSGSVLAHAVTCA
SLALADAGIEMYDLVLGCSIRQNGASYVVDPSYMEENSCSSVSSENQGGLTVAFLPSLNQ
ISGLQSDGEMNEETLTAGVRTCIEGCYKLYPVIQQALTKAVRRAAPPPSES
NT seq 876 nt   +upstreamnt  +downstreamnt
atgccggactgttttccacacgccgtcacatttccttttctctgcaccaccatgccgact
gacaccaaacgtgtacgcggcccagaagtttctcaaagtccgactctgtttttgtgtaag
catgtggccgttctcccctcgcacgggcgcagagcggacggtcggcagcgggaccaggta
gacgtccggccggtgtttgtgcgctgcgggctagtgagccaggctaaaggctccgcgtac
atcgaggctggaaacaccaagttgatgtgctgcgtttacggccccagagaaatggagcgg
aaagacgagaccgatatgaaatgtggaaagttgactactgacatgcgtttcgctccattt
tcctgcctggagaggggctcctggattcagggaagccaggacaaggacctctccctgatg
ctacatgagagtctgcagccagccgtgtgcctccataaatatccccgctctcagattgag
gttaatgtgatggttcttgagaacagcggctcagttctggcccatgctgtcacatgcgct
tccctcgctcttgcagatgcaggaatcgaaatgtatgatctggtgcttggttgttccata
cgtcagaatggcgcctcttatgttgtcgatccttcttacatggaggaaaacagctgcagc
tcagtcagcagtgagaaccagggtggtctgactgtagctttcctccctagcctgaaccag
atttctgggctgcagtcagatggagaaatgaatgaagagactctgacagctggggtccgg
acctgcatcgagggatgctataaactgtaccctgtcatccaacaagccctgaccaaggct
gtgcgccgagctgcccccccgccatcagagagctga

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