Gymnodraco acuticeps: 117559551
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Entry
117559551 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG7-like
KO
K14409
protein SMG7
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117559551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gacu03019
]
117559551
Messenger RNA biogenesis [BR:
gacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117559551
mRNA cycle factors
Common to processing body (P body) and stress granule
117559551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
zf-AD
Motif
Other DBs
NCBI-GeneID:
117559551
NCBI-ProteinID:
XP_034092237
UniProt:
A0A6P8WX77
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDLKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPSRV
KSSQLGIISNKQSGSSIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLV
PSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKT
KWSVSDFIRAFIKFHGHVYLSKSLEKLDALREKLEEQFQKLILQKAFSSQQLVHITVINL
FELHHLRELPSEEGEPSCSEQPISWFQLLGLFMSFLGVMCSRALLNKSRGEEIMGECPLP
AIKVSLDWLRLRPSVFHEAAVDQRTHIWPWLVSILNSFQPKEDDVTCPSVTPLPEEFELQ
GFLALRPALRSLDFTKGHQGILVDRDGLPLQTRHQRLISLGKWVADNQPGLIQCSVSEDG
LLLFITDIPEQAIEEPLEKEKEVPVLQESSNAEQQPNDGSGNSGLKSVLSAGKTQSSWPD
GGERPVVTFKENIKPREPSRSQQLKDSGKERRDFNKGNGAAAGKTEPKRERDGKRKSEMK
KAPHEKTADAGKQVKAQTELRKTPVSEAKKTPVTQTQTQTQTQFIPIHHPGAFPPLPSRP
GFPPSAYVIPPPVGFPGLQVNPGFTFSSGVSVPPFLQAGVLSQQGVQGGGKPSHIPYSQQ
RPSGPPQGPGASGGQQQLQVQAMNQNHQQQQSPTKPGGQQMGKSPPHHPGLQQYMQEQPA
QMWSQAQAALQNLSPMQMSMKQXSRPPQQGFYMTPDPLKMYEHQLQSPASMDKKMKFPSV
KMQDFYWEPSYRMGEGLAVMADRMKRAPPGGMCSEQEGQQGPRGPPFEDHKSSPLPLPDL
FKTLADFEEEEELAFSKPPDFFQALAGPLSSAPGPNIFLPNQSRMESGPEVVGQSSSLLP
MSGFPMQEYNQNSIFSQAYGKSLPPSSKPEAPMMHQEPSLYSLFEGTPWSPSLPASSDHS
TPASQSPHSSNPSSLPSSPPTHNHGAMPFSNFGPIGTPDSRDRRVVDRWKADKTGFGLDF
LPAPASSGSDSSWHQAPPPGSSWANQESPMEESSTVLLDSLKSIWSGSMLQTGPSALEQL
LLQQKQKQRGAMNPPH
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtatctacgacaggcagaggccctgaaggcggacatgacagat
ttgaagctgggcgcggccgaggtgtggacgtcgcgccaggcgctgcaggacctgtaccag
aagatgctggtgaccgacctggagtacgctctggacaagaaggtggagcaggacctgtgg
aatcatgcctttaagaaccagatcaccacgctgcagagtcaggccaagaaccgagccaac
ccgaaccgcagcgaggtgcaggccaacctgtctctgttcctggaggcagccagcggcttc
tacactcagctgctgcaggagctgtgcacggtgtttaacgtggacctgccgtctcgcgtg
aagtcctctcagctcggcatcatcagcaacaagcagagcggcagcagcatcgtcaccccg
cagcccagctcctgctcctacatctgccagcactgcctcgtgcacctgggagacatcgcg
cggtaccgtaaccagacgagtcaggcggagtcgtactacagacacgccgctcagctggtc
ccgtctaacggtcagccgtacaaccagctcgccatcctggcctcgtctaaaggagaccac
ctgaccaccatcttctattactgccgcagcatcgccgtcaagttccccttccctgcagct
tccactaacctgcagaaggctctgtccaaggccctggagagccgagacgaagtgaaaacc
aagtggagcgtctcagatttcatcagagccttcatcaagttccacggccacgtctacctg
agcaagagtctggagaagctggacgctctgagggagaaactggaggagcagtttcagaag
ctcatcctgcagaaggccttcagctcccagcagctggtccacatcacggtcatcaacctg
ttcgagctccatcacctcagagagctgccgtctgaagaaggggagccgagctgcagcgag
cagccaatcagctggttccaactgctggggctcttcatgtccttcctgggcgtcatgtgc
agccgagctctgctcaacaagagtcgtggggaggagataatgggcgaatgtcctcttccc
gccatcaaagtgtctcttgattggctcaggctgagacccagcgtcttccacgaggccgcc
gtcgaccagaggacgcatatctggccctggctcgtctccatcctcaacagtttccagccc
aaagaggacgacgtgacctgcccctcagtgacgcccctgccggaggagtttgagctgcag
ggtttcctggctctgcgtcccgctctcaggtccctggacttcactaaaggacatcaagga
atcctggtggaccgggacgggctgccgctgcagacccgccaccagaggctcatcagcctg
gggaagtgggtcgctgacaaccagccgggtttgatccagtgcagcgtgagtgaagatggt
ctcctcctcttcatcaccgatatccccgagcaggccatcgaggagccgctggagaaagag
aaggaggtgccggttcttcaggagtcgtctaacgccgagcagcagccaaacgacgggtca
gggaactccggtttgaagtctgtgctctcagcggggaagacgcagagctcgtggcctgac
ggcggagaacggcccgtcgtcaccttcaaggaaaacatcaaaccccgagagccgagtcgc
agtcagcagctgaaggacagcgggaaggagaggcgagacttcaacaaggggaacggggct
gctgctgggaaaacagagcccaagagagagagagacggcaagaggaagagcgagatgaag
aaagccccgcacgagaaaacagccgacgccgggaaacaggtgaaggctcagacagagctg
aggaagactccagtgtccgaggccaagaagacacctgtcactcaaactcagacccagacc
cagactcagttcatccccatccaccatccaggagcctttccccccctacccagcagacct
ggtttccccccctctgcctatgtgatcccccccccggtgggcttccctggtctgcaggtg
aaccccggcttcaccttctcctccggggtctccgtgccccccttcctgcaggcgggggtg
ctcagccagcagggggtccaggggggtgggaagccgtctcacatcccctacagccagcag
agaccctcaggaccccctcagggaccaggagcctcgggggggcaacagcagctgcaggtc
caggccatgaaccagaaccaccagcagcagcagagccccaccaaaccaggggggcagcag
atggggaagagccccccccaccacccagggctgcagcagtacatgcaggagcagccggct
cagatgtggtctcaggcccaggcggcgctccagaatctgtctccgatgcagatgtccatg
aagcagnncagccgccccccccagcagggcttctacatgacccccgaccccctgaagatg
tacgagcaccagctgcagtcccccgcctccatggacaagaagatgaagttccccagcgtg
aagatgcaggacttctactgggagccgtcctacaggatgggagaggggctggcagtgatg
gccgaccgcatgaagagggccccgccgggggggatgtgctccgagcaggagggccaacag
gggccccgcggacccccgtttgaggaccacaagagttctcctcttcctcttcctgacctg
ttcaaaactctagcagattttgaggaggaggaagagctggcgttctctaagcctcctgat
ttcttccaggcgttggccggtcctcttagctctgcgcctggacccaacatatttctgccc
aatcagagccggatggagagcggccccgaggtcgtcggccaatcatcttctctgctgcct
atgtctgggttccccatgcaggagtacaaccagaacagcatcttcagtcaggcgtacggg
aagagcctgcctcccagctccaagcccgaagctcccatgatgcaccaggagccgtcgctc
tactccctgttcgagggcacgccctggtccccctccctccccgccagctcagatcactcc
accccagccagccagtccccccactcctctaaccccagcagcctgccctcctcccccccc
acccacaaccacggagccatgcccttctctaacttcgggcccatcggcactccggacagc
cgggaccgcagggtggtggaccgctggaaggccgacaagaccggattcgggctggacttc
ctgccagcgccggcctcttcggggtctgacagcagctggcatcaggccccgccccccggc
agctcctgggccaatcaggagtctccgatggaggagtcgtccacagtgctgctcgacagc
ctcaagtccatctggtccggctccatgctgcagacgggcccctcggctctggagcagctc
ctcctgcagcagaagcagaagcagcgcggcgccatgaacccgccgcactga
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