Gymnodraco acuticeps: 117559854
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Entry
117559854 CDS
T09661
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gacu03000
]
117559854
Transcription factors [BR:
gacu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117559854
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117559854
NCBI-ProteinID:
XP_034092451
EnsemblRapid:
ENSGAUG00000016777
UniProt:
A0A6P8VP17
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MACVSRSVPVRERCWVSSFLPTRMVEPSPKALHLLSGGDVNMACVGVKVEQEESCGGVGV
ITNAEPPKRSPSRDWSGNHPLEARQLTPPLSRSPSEGSPGKELPHRLSPLGLKEARTHGR
AEGHSSFKEVMPTIEKLLNADWKEKLLDKSSVGAGQLKGTPEALAEKELQLLMMINQLSG
LREQLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQV
SHQVNMPYVMIPAFHPNAQSLQVSSDQQMTLPLQPIPCKPAVDYPMQLLPNPHAPPTKRS
SGSFRQEASQPLNLTSKPKGHDLGKTQSPLGLELGLHGAYRHRDVQRETTRSPQRTTLSF
LGDGDVVTQAIHDAQQLLRGHGSRERDMERERDVGAKMEYKESPRSERISHVERGGEEHL
SSDSEGALPNSVPGNYTETRPPPTSAHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISK
ILGSRWKGMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAM
MKNRRQEQRATYTHSQTDPQQLHYPHSEGPYPGATGSVSVANLSFHPALLEHYLPQPPPT
LRRAEGQATPTSLPRERERERERERPPYSEGEESDGGERSEGELVLLTD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgtcagcagatctgttccagtgagggagcgctgctgggtctcctcattcctc
ccaaccagaatggttgagccaagccctaaagcattgcacctcctctcaggtggggatgtc
aacatggcctgtgtcggagtcaaagtagaacaagaggagtcctgcggaggagttggagtc
attaccaatgctgagcctcctaagaggtctccgtcacgtgattggtcgggaaatcatcca
ctggaagcccgccaattgacgccaccgctctcccgctccccctcggagggctctccaggt
aaagagctgcctcacaggctgagcccactgggactgaaggaagccaggacacatggtaga
gctgagggacactccagcttcaaggaagtaatgccgaccattgagaagctgctgaatgct
gactggaaggagaaacttctggataaaagctcagtgggagcaggacaactgaaaggtacc
cccgaggctctggcagagaaggagctccagttgctgatgatgatcaaccagctgagcggt
ctgagagagcagctcctgggagcgcactctgagcagaggaacatggccgccctgctgctg
gagaaacagcagcagcagatggagctggctcgacaacagcaggaacagattgccaagcag
cagcagcagctgatccagcagcagcacaagatcaaccttcttcagcagcagatccaggtc
agccatcaggtgaacatgccctacgtgatgatcccggctttccaccccaacgcacagtcc
ctccaggtctcctctgaccaacagatgactttacctctgcagccaatcccctgcaaacca
gcagtggactatcccatgcagctgctgccaaaccctcacgccccccccaccaagaggagc
agtggttccttccgacaggaagccagtcagcccttgaacctgacctccaagcccaagggt
catgatctggggaaaacccagagtccactgggtctggagctggggctgcatggagcgtac
cggcaccgagacgtccagagagaaacgaccagaagcccccaacgaaccacactcagtttc
cttggagacggagacgttgtcacccaggcgatccacgacgcccagcagctcctgagaggc
cacggcagccgagagagggacatggagagagagagggatgtgggagccaagatggagtat
aaggaatctcctcggagcgagaggatttctcatgtggagagaggaggtgaggagcacctc
agcagtgattctgagggggcccttcccaactctgtcccaggaaactacactgagacccgc
cccccccccacctccgcacacatcaagagacccatgaacgccttcatggtttgggccaag
gacgagcggcggaggatcttgcaagcgttccccgacatgcacaactcctccatcagcaag
atcctgggctccaggtggaagggcatgtccaaccaggagaagcagccttactacgaggag
caggcgaggctgagccggcagcacctggagcgttaccccgactataagtacaaaccccgg
cccaaacgcacctgcatcgtggaggggcggaggctgagggtgggcgagtacaaggccatg
atgaagaaccgcagacaggagcagagagccacctacacacacagtcaaacggaccctcag
cagctccactaccctcacagcgagggtccgtacccgggcgctaccggctcagtttcggtg
gcgaacctctcctttcaccccgcgctgctggagcattacctgccgcaacccccgcccact
ctgcgccgagccgagggccaggccacgcccacttccctgcccagagagagggagagggag
agagagagggaaagacctccgtacagcgagggggaggagagcgatggaggggagaggagt
gagggggaactggtgctcctcacagactga
DBGET
integrated database retrieval system
