Gymnodraco acuticeps: 117560435
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Entry
117560435 CDS
T09661
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04142
Lysosome
gacu04144
Endocytosis
gacu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117560435 (cltcl1)
04142 Lysosome
117560435 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117560435 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117560435 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117560435 (cltcl1)
Membrane trafficking [BR:
gacu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117560435 (cltcl1)
Exosome [BR:
gacu04147
]
Exosomal proteins
Proteins found in most exosomes
117560435 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
LVIVD
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
117560435
NCBI-ProteinID:
XP_034093178
UniProt:
A0A6P8W3Z4
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGDQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTV
ALVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKASTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRIAVRSNLAG
AEEIFDRKFNTLFAQGSYSESAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDATLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVAYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLSVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHDGCEEPATHNALAKIYIDSNNTPERFLKENTF
YDSAVVGKYCEKRDPHLACVAYERGECDLDLIKVCNENSLFKSEARYLVRRKDPELWANV
LEEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINKLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYDEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRAYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAAITMM
SHATDAWKEGPFKDIIAKVANVELYYKSLSFYLEYKPLLINDLLTILSPRLDHSRAVTFF
SKMNQLKLVKPYLRSVQSHNNKSVNEALNNLLTDEEDFQGLRASIDAYDHFDTIDLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKQDKLYKDAMLYAAESKDAELAETLLQWFLE
EDRKECFAACLFASYDLLHPDVVLELAWRNNIMDFAMPYFIQVMREYMTKVDEFAAKVTV
DELEEADSQRKTEEEVTEPQPIVFGQQLMLPASPAPVAAQPPYPGYGYPAAPAGFPAQPA
YGYNM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatactgccgatacgatttcaggaacatctgcagctgcagaacatgggcgtg
aaccccgccaacattgggttcagctatctgaccatggagtcagacaagttcatctgcatc
agagagaaggtgggcgatcagaaccaggtggtgatcgtggacatgtccgaccccaccaac
cccatcaggagacccatctctgctgacagcgccatcatgaaccccgccagcaaggtcatc
gccttgaaagacgctgccaagacgctgcagatcttcaacatcgagatgaagagtaaggtg
aaggctcacaccatgacggaggaggtcatgttctggaagtggatatcggtaaacaccgtt
gcattggtcacagatacggccgtctatcactggagcatggagggggattcccagcccacc
aaagtattcgatcggcacgccagtctggccggatgtcagatcattaactacagaactgac
gaacaacagaaatggctactgctgatcgggatttctgcacagcaaaaccgtgtggtaggg
gcgatgcagctgtactctgttgacaggaaagtgtcccagcccatcgagggccacgctgcg
gccttcggggagttcaaggtggagggaaatgccaaagcatccaccctcttctgctttgct
gtgcgctcacaggctgggggaaagttgcacatcattgaagttggtcagccagctgcagga
aaccagccatttgcaaagaaagcagtggacgtgttcttccctccagaggcccagacagac
tttcctgttgctatgcagattggcaacaagcatggtgtaatatatttgatcacaaagtat
ggttacattcacctgtatgacctggagtctggagtctgcatctacatgaaccgaatcagt
gcagagaccatctttgttaccgcccctcatgaagccacctcaggaattattggggtcaac
aagaagggacaggtgttgtcagtgtgtgttgaggaggaaaacattgtcaactatgccacc
aacgtcctgcagaatcctgatctagccttgagaattgctgtgaggtcaaacctcgctggg
gccgaggagatttttgacaggaagttcaacactctgtttgcacagggaagttattcagag
tccgcaaaggttgctgcatcagcacccaagggtatcctgaggacagcagagaccatccgt
aagtttcagagtgtccctgcccagcccgggcaggcgtctccactgctgcagtactttggt
attctgctggaccaaggccagctcaacaagtttgagtctctggagctgtgcaggcccgtc
ctgcagcagggccgcaaacagctgctggagaaatggctaaaggaggacaagcttgagtgc
tcagaggagctgggagacctggtgaaggcctctgacgccaccctcgctctcagtgtgtac
ctcagagccaacgtccccaacaaggtcatccagtgcttcgctgagacgggacagttccag
aagatagtgttgtacgctaaaaaggtggcctacaccccagactgggtgtttttgctgaga
aatgtgatgcgtgtcaacccagaccagggactgcagttcgcccagatgctggtgcaggac
gaggagccgctggccaacatcaaccagattgtagatgtgttcatggagggaaacctgatc
cagcagtgcacctccttcctgttggatgcactaaagaacaaccgcccggccgaaggacac
ttacagacacgcctgcttgagatgaacctcatacatgctccccaggtagcagatgcgatc
ctggggaaccagatgtttacccactatgaccgtgcccacgttgctcagctgtgtgagaag
gcaggactgctgcagagggctcttgaacacttcacagacctgtatgatatcaaacgggcc
gtggtgcacacacatctgctcaaccctgagtggctggtaaacttctttggatctttatca
gtggaagactcgctggagtgtttaagggccatgttgtcggctaacatcaggcagaacctg
cagctgagtgtccaggtagcgtctaagtatcatgagcagctcgggacccagtccttagtg
gagctctttgaatccttcaagagttatgagggcttgttttacttccttgggtcgattgtg
aatttcagccaggagcctgatgttcattttaagtacatccaggctgcctgcaaaacaggc
cagatcaaagaagtggagagaatctgtagagagagcaactgctacgacccggagagggtt
aaaaacttcctcaaggaggccaagctgacagaccagcttcctctcatcattgtgtgtgat
cgctttgacttcgtccatgacctggtgctctacctctaccgcaacaatctgcagaaatac
attgaaatctacgtacagaaagtgaaccccagtcgtttaccggtggtgataggcggcctg
ttggatgtggactgtgccgaggacgtcattaagaacctgatcatggtggtcagagggcaa
ttttccactgatgagttggtggaggaagtagagaagaggaaccggttaaaacttctattg
ccatggctggagtcccgtattcatgatggatgcgaggagccggctacccacaatgccctg
gccaagatctacatcgacagcaacaacacacctgagcgcttcctgaaggagaacacgttc
tacgacagcgccgtggtcgggaaatactgcgagaagagagacccccacctggcctgtgtg
gcgtatgagagaggagagtgtgacctggatctcatcaaagtgtgcaacgagaactcctta
ttcaagagtgaggctcgatatctggtgcgaaggaaagatcccgagctatgggcgaatgtt
ttggaggaagacaaccccttcagaagacagctaatcgaccaggtggtgcagacagcgctg
tcggagacccaggacccagaggaggtctcggtcacagttaaggccttcatgacggcagac
ctgccgaacgagctgattgaacttctggagaagattgttctagataactctgtcttcagt
gagcacagaaatctccagaacctgctcattttgacggccatcaaagccgatcgcactcgt
gtgatggagtacatcaacaagctagacaactacgacgctccagacattgctaatattgcc
atcagcaatgagctctttgaagaagcgtttgccattttcaagaaatttgatgttaacaca
tcagccatacaggtattgatagagcacatagggaacttggatcgtgcctatgagtttgct
gagcgctgtaatgagcccgcggtgtggagccagttagccagagctcagctgcagagggat
ctggtgaaggaggccatcgactcgtatatcaaagccgttgacccttcagcttacatggag
gtggtcaacgcagccagcaagaacaataactgggaagacttggtcaaattcctccagatg
gctcgaaagaaagcgagagagtcgtatgtagagacagagctgatctttgctttagctaaa
acaaaccgtctggcagagctggaggagtttgtcagtgggcccaacaatgctcacattcag
caggtgggtgatagatgttatgatgagggcatgtacgacgcagccaagctcctgtacaac
aatgtttccaacttcgctcgcctcgcatcgacgctcgtccacctcggggagtaccaggcg
gctgtggacagcggcaggaaggccaacagcacacggacgtggaaggaggtgtgtttcgcg
tgtgtggatggcgaggagttccggttggcacaaatctgcggcctccacattgtgatccac
gctgacgagctggaggacctgatcagctactatcaggaccgtgcatacttcgaggagctc
atcgctctgctggaggctgcgctgggcctggagcgcgcccacatgggcatgttcacagag
ctcgccatcctctactcaaagttcaaacctcagaagatgagggagcacctcgagctcttc
tggtccagagtcaacatcccaaaggtccttcgtgcagcagagcaggctcatctatgggca
gagctggtgttcctttacgataaatatgaggagtttgataatgccgcaatcacaatgatg
tctcatgccacagatgcgtggaaagaagggccgttcaaggacattattgctaaggttgcc
aatgttgagctgtactataaatctctttccttttacctggaatataaacccctcctaatt
aatgacctgctgaccatcctgtctccgcggttggaccacagccgagctgtcacctttttc
agcaagatgaaccagctgaagttggtcaagccttacctgaggtctgtccagagtcacaac
aacaagtccgtcaacgaagccctcaacaacctgctgacagacgaggaagacttccagggc
ctgagagcatccattgatgcctatgatcactttgacaccattgacctggcgcagaggtta
gagaaacatgagctgattgagttcaggcgcatcgcagcgtacctatacaaaggcaacaac
cgctggagacagagtgtggagctctgcaagcaggacaaactctacaaggatgccatgctg
tacgccgcagagtctaaggacgcagagctggcagagaccctgctccagtggttcctggag
gaggacaggaaggagtgcttcgcagcctgcctgttcgcctcctacgacctgctgcacccg
gacgtggtgctggagctggcctggaggaacaacatcatggactttgccatgccgtacttc
atccaagtcatgagagagtacatgacaaaggttgatgagtttgcagcgaaggtgacggtg
gacgaactggaggaggcagacagccaaaggaaaactgaagaggaggtgacagagcctcag
cccatagtgttcggccagcagctgatgttgcctgcctctcctgctccggtggctgcccag
ccgccgtacccaggctacggttacccagctgccccggcgggcttccctgctcagcctgcc
tacggctacaacatgtag
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integrated database retrieval system
