Gymnodraco acuticeps: 117560869
Help
Entry
117560869 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 1
KO
K24155
rabconnectin-3a
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117560869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117560869
Membrane trafficking [BR:
gacu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117560869
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117560869
RAVE complex
117560869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF4
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
117560869
NCBI-ProteinID:
XP_034093855
UniProt:
A0A6P8W8R7
LinkDB
All DBs
Position
Unknown
AA seq
3095 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGNVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQPPDQKDTSPPKLNCQWQKTGQFVLKSMVRNLAW
HPTGSTLLTGSSSLQLWSHIDEVNDEAEEGGRQKEMTIGDFLSAWRCIWESKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTGKWKLGVSRLFTPPEPSDSFQAELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCTVLLTCCKDSVCRLWAETLLPGDSLLSGYHSNHTSGQHND
TPRSAGPSWKNACNGKSQGKMAQGSNFQESLHASFHRDVPKPSLTSCLPHNQSRHYNHKR
SSSSMPHANALCHFHIAASINPATDIPLLPSISSLSAADDEEPGGPFTVHWLNNKELHFT
LAMEVFLQQLQGSLEQQNECSNEEPEDEENCDEDNGSRPGDSQEPEAVELPLAAVKHQVN
VLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAI
SLSHSVVMYACNKNVDLAIQHDRQRPPGSTLPQTKSALISYRGQGKTAPSSSLRLSIFTP
NVLMISKHSDGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTT
SHHNALRTPEADSILAPPDTYSSGFSHPASLPRGSRPSRSSLGVVSQDPNAIYSELILWR
VDPVGPLSLSGGVSELARINSLHASAFANVAWLPTFIPSSCLGVYCNSPSACFVASDGHS
LRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDAITDFQGKQTQL
LHVFEEDLILGSERTEDTQETPDSPHTASSDTAFSARFFLVVVELTPTGRSLLHMWHLHL
AARPITTEETLTKNDSSSASDMNSSTFSFDTVGSPVPQKSKPCTSNLQSACRLSLTTHRL
YSQEMALPEGVEAISVTPSAGHLSASCSLPADRLPYLLATSCSDGKVRFWRCTVMEPSSM
NNLVYQWEEWPLLVEGMLPNSSAVSVQGHPIEVSCCHSGRIAVAYRQTPNSPLNSTPYLN
SQGLLTCPPTLACSPFINSINTHMTPTVTVQHSPNLTPSPNQANTNEPLVHISIFQCEST
GGSQWILEQTIVLDSTESANIPGAMDCPIPNQYCPASSSASLVHLDWVSQEDGSHVLTVG
IGTKIYMYGRLSGKPPELGLSSEAGRDLSSSRLVLLRSVNLVSSVEGSLPIPVSLSWVRD
GILVVGMDCEMHVYSQWQPPAPLKASVAQDTDMSSSVSSIISAVRQSQEEGLSSGAPMST
LPLPKRALTRSMMSLAQKLSGKRTAYDLPLEKEDSGLFEAAHQLFPTLPQYHPVQLLELM
DLGRVHRAKAILSHLVKCIAGEIVALKDSTTNPEKRLRSRTISAGGSTARDSKMFSKAEN
SPPDYTEISSIPPLPLYALLAADDEDTSPKPDKVGSVSGDSGHGSSHPDVYDELFQAPSI
VDLDPLEDDQEEMGNKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALA
DTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHRAQLLRQGLSTC
HYAWAFHSEAEEELLNMLPALQKGELTWPELRSMGVGWWLRSTNKLRKCIEKVAKTSLQK
NNDPLDAAIFYLAMKKKAVVWGLYRSQRNAKMTEFFRNNFSEDRWRKAALKNAFSLLGKQ
RFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFETASTYKKILRRNVLGQ
DKQIPAQKDPFLRSMAHWVLEDYSRALDTLLEQPADRTSSRSTESKCDTGSSSVSACNPE
VFNFYTYLRTHPLLLRRHFGSSEKAKVGLTAERRRADSISLEERRLFFTAAYAHLQAGCP
MLALEVLSKMPKVRKHSKLPHHEGAGIAAELSVGSKHGQGSEQDWSQSALNGYESDKNSL
CNSRSDSVLSFDWSGQPSMAHPDEPLELKWESDKDDDEEDEDEEETTNGKSGRTEDGSSL
FQDAQDAMSPLMETVPGEESEDDFLAPSNDILAAQLKFTACLKIMTNELRTLSTGYELDG
GKLRYQLYQWLEREVVALQRCCSYKPCLPELSAPGGGSVSGLGEEEQPGSPRADIQRSRW
HWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSLQAVMPCCQPTSIP
LLMACTANVKTVVANPIVYLTNLAHDILQTINSLDSPPHPDVVNNEIYVMHTLAASLSAC
IYQCLCDGHTHSHVNHFTGIVYQSVLLSQKQPARTVSMDESVQPNTPPAQWPGIASLIRL
LSSAGEESQPGLAVLLCEIVTAVFLSLFVHGMATHSSNELFRIVAHPLNSQLWVSVFGGG
ARTPVIEKPTSLTRTPPPASPSGSDRKSRRFRLLSSRSGSKDESGIEREGPSSPKHSPVV
KQEATSIFKERFIPPELSIWDYFITKPSLPQSENQIEYDSEESQDSQDEEEDDDQYEDVF
DPSSPHREHSNHNSYSWCLMRLAMVQLVLVNLKTFYPMAGYDLLDLPVCSPLCHAVLKTL
QRWEQVLQKRLEIFGGPPSKYISTTPQDETTAPGPALLRHKALFEPSNTPFRTSHHSALP
VKRLWQYLVKQEEVQETFIRNIFTKKRDPNEASEDQTDNMKCSGMEETGNHQAESDLGSP
GGKSRIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDEEAEAK
GVADDFLVVHARDDFATIHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVMIKRNINNVRR
MTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADG
GLSLWQTNTSGTAPKPYLTLHCHNKTANDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTP
ANSLVHAFCCHESGATVLLMASRQQLLITGGRKGWISVLELAPRHQRQSFLAHDSPVKAL
AVDPTEDCFISGSAEGNIKIWSLATQCPLYNFPNEHARQSLFRNLGTGVMQIEVGPANHI
FSCGADGTMKMRVLPNRFSVANNNNNHNSDVKFII
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcactggggctgtcaaccctggagacaattgtttctctgtt
ggcaatgtcaacaatgtgccattcacggcttatgcgtcaggttgtgacgtggtgattttg
ggcagtgactttgagcgtctgcagatcatcccgggggccaaacatggcaacatccaggtc
ggctgtgtggattgctcactgcagggtggacagattgcagcttcctatggaagcatcgtg
tgtgtctttgagcccgttcagcccccagatcagaaggacacatcgccgcctaagttgaac
tgccagtggcagaagactggtcaatttgtgttgaagtctatggtacggaacctggcctgg
caccccacaggcagcaccctcctaacaggctctagtagcctccagttgtggtctcatata
gatgaagtgaacgatgaagctgaagaaggaggaaggcagaaagagatgaccataggagac
tttctttcagcctggaggtgcatctgggagagcaagacagcctctccagtgagtttaatg
aagttctctcctgatggggaattctttgctactgctggacaggatgactgcctggtaaag
gtctggtacagcaccggtaagtggaagttgggtgtttccagactcttcacacctccagag
cccagtgacagtttccaggcagagctggccttctcctttgtctacctggcccatccccgc
tctgtaactggcttctcctggaggaagaccagcaagtacatgccacgaggtgcagtgtgt
actgttctgctcacgtgctgtaaggacagcgtgtgtcggctctgggcagagacgctgttg
ccgggtgacagcctcctctcaggttaccacagcaaccacacttctggccaacacaatgac
acacccagatctgctggcccttcttggaaaaacgcctgcaatgggaagtcgcaaggaaaa
atggcacagggatcaaattttcaagaatcattgcacgcctcctttcatcgggatgtcccc
aagccctctttgactagctgcctgcctcacaaccagagccgacactacaaccacaagagg
agcagcagcagcatgccccacgccaacgcgctctgccacttccacatcgctgccagcatc
aaccctgctacagacattcctctgctgccctccatctcctctctgagtgccgccgatgat
gaagaacctggaggcccttttactgtccactggctcaacaacaaggagcttcatttcact
ttagctatggaggtcttcctacagcagctccaaggcagcctggagcaacagaacgaatgc
tccaacgaagagcctgaggatgaggagaactgtgatgaagataatggaagcaggccaggc
gactcccaggaacctgaggctgtggagctccccctggcagcggtgaagcaccaggtgaac
gtgctgctggaggagtggaacaaaggggcggacatgttgttcagtatccatcccatggac
ggctctctgttggtctggcatgtggactggttggatgaataccagccaggcatgttcaga
caagctcaggtttcctttgtgtcccgtatccctgtggcgttccctacaggtgatgccatc
tccttgagccacagtgtggttatgtacgcctgcaacaaaaacgtagatctggctatccaa
catgacagacagcgaccacccgggagcacattgcctcaaaccaaatcggctctaataagc
tacagaggccaaggaaaaactgcacccagcagtagtcttcgactgagcatcttcacccca
aacgtcctcatgatctccaaacactctgacggctccctgaaccagtgggcagtcagcttt
gccgaggactctgctttctccactgtgctcagcgtctctcacaagtcacggtactgtggc
caccgcttccacctcaacgacctggcctgtcactctttgctccctctcctcctcaccacc
tcgcaccacaacgccttgaggacgcccgaggcagacagcatcctggctccccccgacacc
tactcctctggtttctctcaccctgcgtctctgccccgagggtcacggcccagcaggtca
tccctgggtgtagtttcccaggatccaaatgccatctacagcgagcttatattatggaga
gtagaccccgttggcccgctgtctctgtcaggcggggtgtctgagcttgctcggatcaat
tctctccacgcatcagcgtttgctaatgtagcctggctgcccacgttcatccccagcagc
tgtttaggtgtgtactgtaactctcccagcgcctgcttcgtggcgagtgacggccactca
ctccggctgtatcaggctgttatcgaagctaagaaactcctgagtgagctctccaatcct
gagatatcaaaatatgtcggggaggtattcaacatcatcagtcagcaatccacagcaaaa
ccagggtgtattatagagctggatgccattacggactttcaggggaagcagacccagctt
cttcatgtgtttgaggaggatctgatcctcggcagtgagagaacggaggacacacaggaa
actcctgattcccctcacactgcctcaagcgatacagccttctctgcacgtttcttcctt
gttgtggtcgaattgaccccgacaggtcgctcgctcctccacatgtggcatctccatctc
gctgcccgacccatcaccacggaagagaccttgacgaagaacgattccagctcagcttct
gatatgaacagctctacgtttagctttgacacggtcggttctccagtacctcagaagagt
aaaccctgcacttcaaatctgcagagtgcctgtcgcctcagcctcacaacacacaggctc
tacagccaagagatggctctgccagaaggggtggaggccatcagtgtgacaccttcagca
ggtcacctgagcgcatcatgctctctgccagctgatcgtctgccttacctgctcgctact
tcctgttcagatggaaaggtgcgtttctggaggtgtacagtcatggagccttcaagtatg
aacaacctggtgtaccagtgggaagagtggcctctgctggtggagggaatgcttcctaac
agcagcgcagtgagcgtgcaaggtcatcccatagaggtgagctgctgccactcgggacgg
atcgctgtcgcctacaggcagacaccaaactcccctctcaactcaacaccttacctgaac
tctcagggacttttgacttgtcctcctactctggcctgctccccttttataaacagtatc
aacacccacatgaccccaactgtgactgtacagcatagcccaaatctcacccccagcccc
aaccaagcaaacaccaatgagccattggtccacatcagcatctttcagtgcgagtccact
ggtggctcacagtggattctagagcagaccatagtcctggacagcacagagagtgccaat
atcccaggtgccatggactgtcctatacctaaccagtactgtcctgcctctagtagtgcg
agcctggttcatttggactgggtctcgcaagaagacgggtcacatgtcctcactgttggt
atcggcacgaagatttatatgtacggccgtctctctgggaaacctccagaactgggtttg
tcatcagaggccggtagagacctgagctcgtcccgtctggttctactgcgctcagtcaat
ctggtctcctctgtggaaggctccttacccattcctgtgtccctctcctgggtgagagat
ggcattttggtagtaggcatggactgtgagatgcacgtctactcccagtggcagcccccg
gccccactcaaagccagcgttgcccaggacacagacatgagcagcagcgtctcctccatc
atctctgccgtcagacagagccaggaggaggggctcagctctggggcccccatgtctaca
ctgccccttccaaaaagggccctgacgagatccatgatgagtcttgctcagaaactcagt
gggaagagaacagcttacgacctgccgctggagaaggaagattctgggctttttgaagca
gctcaccaactctttcccactctgccccagtaccaccctgtacagctgctggagctcatg
gatctcgggagggttcaccgtgccaaagccatcctgtcccatctggtgaaatgcattgct
ggagaaattgtggctcttaaagacagtacgaccaaccctgagaaacgcctgcgctctcga
accatcagcgccggaggcagcacggccagagactccaaaatgttcagcaaagcagagaac
tccccccctgactacacagagataagctccatccctccgctgcctctctacgcccttctg
gcagccgatgatgaggacacgtcaccaaaacctgataaagtgggcagtgtgagtggagac
agtgggcacggttctagtcaccctgatgtctatgatgagctctttcaagcgcccagcatc
gtggacctggaccctctggaagatgatcaagaggaaatgggaaacaaggttattgacctg
tcgcagtacagtccgacattcttcggtccagagcatgctcaggttctgtccagtcacctc
ctgcattccagtttgcccggactgacccgtatggagcagatgtctctcatggcgctggcc
gacaccatcgccaccacaagcacagacctcaaggacagccaaggcaagagtaaaggtggt
gagacgctggatgagtgcggtctgaagttcctgctggccgtcagactccacaccttcctc
tctacctcgctgcctccagcacaccgggcacagctgctacggcaaggcctgtcgacatgt
cattatgcctgggccttccactccgaggctgaggaggagctgctgaacatgctgcctgct
ctacagaagggagagctcacctggccggagctgcgctccatgggcgtgggctggtggctg
cgcagcaccaacaagttacgcaagtgtatagagaaggttgccaagacttctttacagaaa
aacaatgatcctctggatgcagctatattttacctcgcaatgaagaagaaggcagtggtc
tggggattgtacagatctcagaggaatgccaaaatgacagagttcttccgcaacaacttc
agtgaggacaggtggaggaaggcagctctgaagaatgccttttctctgttggggaagcag
cggttccagcattctgcagccttcttccttctagccggctccctaaaggatgctgtggag
gtgtgtatagagaaaatgcaggacctacagcttgcactggtgatctccagattgtatgag
tccgagtttgaaacggcatccacctacaaaaagatcctccggagaaatgttctgggacaa
gacaagcagattcccgcccagaaggatccgttcctgcgtagcatggctcactgggtcctg
gaggactacagcagagcgttggacactctcctcgagcagcctgctgacagaaccagctcc
cggtccacggaaagcaaatgtgacaccggctcctcttcagtatctgcctgtaaccctgag
gttttcaacttttacacctaccttcgaacccacccactcctccttcgtcgccactttggc
tcctcggagaaggctaaagttggactgaccgctgagcgccgcagggcagactccatcagc
ctggaggagaggagactgtttttcacagctgcttacgcacaccttcaggctgggtgcccc
atgctggcacttgaagtcctctccaagatgcccaaagtccgcaagcattccaaactccca
caccatgagggtgcaggcatcgcggctgaactcagcgtcgggagcaaacatggacaaggt
tcagagcaggactggtctcagtcggctctgaacggctacgagtcagacaagaacagcttg
tgcaacagccgctcagattcagtgttgagttttgactggagcggccagccgtcgatggca
catcctgatgagcccctggagctgaaatgggagagtgacaaagatgatgatgaagaagat
gaggatgaagaagaaacaacaaatggtaagagcggcagaactgaagacggcagcagtttg
tttcaggatgcgcaggatgccatgtcgccgctcatggagactgtgccaggagaggagagt
gaggatgacttcctcgctccttctaatgacatcttggcggcccagctgaagttcaccgcc
tgcctgaagatcatgaccaatgagctgcggacactgtccacgggctatgaactggatgga
gggaagctacgttaccagctctaccagtggctagagagagaggtcgtggctctccagcgc
tgctgcagctacaagccctgcttgccagagctgtctgccccgggggggggctctgtctcc
gggttgggcgaggaggaacagccggggagccctcgtgctgacatccagaggagcaggtgg
cactggctgcagagcaaccagcccctactgaggatgtttctgagctactgcagcctacat
ggctcccacggaggaggactggcctctgtgcgcatggagctcattctgttgcttcaagag
tctcaccaggatgactccctgcaggcggtgatgccatgttgccaaccaacatccatcccc
ctcctgatggcctgcacggcaaacgtaaagacggtggtggccaatcccatcgtctacctg
accaacctggctcatgacatcttacagaccatcaattcactggactctcctccacaccct
gatgttgtcaacaatgagatctacgtgatgcacacattggctgcctccctgtccgcctgt
atctatcagtgtctgtgtgatggacacacccacagccacgtgaaccacttcacaggaatc
gtgtatcagagtgttttgctgtctcagaagcagcctgcccgaaccgtcagcatggacgag
tccgttcagcccaacaccccccccgctcagtggccaggtatcgcctccctgattcgcctg
ttgagctcggcaggcgaggagagccagccaggcttagctgtgctgctctgtgagatcgtg
actgctgtcttcctcagtctatttgttcacggcatggccactcactcaagcaacgagctg
ttccgcatcgtggcccaccctctcaacagccagctttgggtgtcggtgttcggaggaggc
gctcggacccctgtcatagagaaacccaccagcctcacaagaacaccgccaccagcctca
ccaagcggctcagacaggaagtccaggcggttcagactcctgtcctcacgcagcggatcc
aaggacgagtcggggatagagcgtgagggcccatccagtcccaagcacagccctgtagtg
aaacaggaagctacctccatctttaaagaacgctttatccctccagagctcagcatttgg
gattactttatcaccaagccttcactgccacaatcagaaaaccaaattgaatacgactcg
gaggagagccaggacagtcaagatgaagaggaagatgatgatcaatatgaagatgtgttt
gaccccagctctccgcacagagagcattcaaaccacaactcatacagttggtgtttgatg
cgtctggcaatggttcagctggtgttggtcaatctcaaaaccttttacccaatggcagga
tatgatctattagacctgcctgtgtgctctcctctgtgtcacgctgtgctgaagacgctg
cagcgctgggagcaggtgctgcagaaaaggctggagatcttcgggggccccccttcgaag
tacatctccaccaccccccaggatgaaaccacggcgcctggccccgccctgctcagacac
aaggccctgttcgagccttccaacaccccattcaggactagccaccattcagcgctgcca
gtgaagcgcttgtggcagtatctggtgaagcaggaggaagtgcaggagactttcatcaga
aacatcttcaccaagaaacgggaccccaatgaggcgagtgaggaccagactgacaatatg
aaatgttcagggatggaggagacaggaaaccatcaggctgagtcagatctgggctccccc
ggagggaagtcacgcatcatccacaaggaatctgacatcatcaccgccttcgccatcaac
aaggcaaatcgtaattgtttagtcatggcctccacccatgacatccaagagttggatgtg
tcatccatcttggccacacagatcttgacatggatcgatgacgaggaggccgaagccaaa
ggtgttgccgatgacttcctggtggtgcatgcacgcgatgactttgccaccatccacggc
accacgccgtacactcacagcagcccgggcacccccatcaacatgccgtggctgggtggg
gtgcagacaggccggggtgcagccgtgatgatcaagagaaatatcaacaatgtgagaaga
atgacctcccatcccacactgccgtactacctgacgggggcacaggatggaagcgtccgg
atgttcgagtggggtcactcccagcagatcatctgcttcaggagtccaggcaactccaga
gtcacccggatacgattcaaccaccaggggaacaagtttggtatcgtggatgctgatgga
ggtttgagtctctggcagaccaacaccagtgggactgctcccaaaccatacctgacgctg
cattgccacaacaagacagcaaacgactttgtcttcgtgggctcctcctccctcattgcc
actgcaggactctcaacagacaacaggaacgtgtgtctgtgggacactctggtgactcct
gccaacagcctggtgcatgcgttctgctgccacgagtccggggccacggtgctcctgatg
gcctccaggcagcagctgctcatcacgggagggaggaagggctggatcagcgtcctggag
ctcgccccccgccaccagcgccagagcttcctggctcacgactcccccgtcaaagctctg
gctgtcgaccccaccgaggactgcttcatcagcgggtcagctgagggcaacatcaagatc
tggagcctggccacacagtgtccgctctacaactttcccaacgaacacgctcgccagtcg
ctcttcaggaacctgggcaccggcgtcatgcagatcgaggtgggaccggccaatcacatc
ttctcctgcggcgctgacgggaccatgaagatgagggtcctccccaaccgcttcagtgtc
gccaataataacaacaaccacaacagtgacgtcaagttcataatatag
DBGET
integrated database retrieval system
