Gymnodraco acuticeps: 117561276
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Entry
117561276 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu02010
ABC transporters
gacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117561276
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117561276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gacu02000
]
117561276
Transporters [BR:
gacu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117561276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
117561276
NCBI-ProteinID:
XP_034094465
UniProt:
A0A6P8WBA0
LinkDB
All DBs
Position
Unknown
AA seq
2267 aa
AA seq
DB search
MTVSTQLGLLLWKNFTYRRRQTVQLLIEIIWPLFIFLILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFTDAQKILLYSQKDK
SYEGYTGLLRALRKMQENTARFKLKDFLQDNETLSHFLHNNASLPRYALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTSLEEFVHIADHNLSRQIQESICNSTSDWLDQAQSHFLSNLDF
FKPIRKDVRSDPKVVQEVAAATDSLLESLGALATELASMKSWKDMRKEILYLTVNATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDSDHHSSYDNTSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGLLRDLGGM
WEEMRPKVWNFMENGEEIDMVRTLLQNSASAAFLNNQLSGTEWRVSDLSAFLSKVSEDKR
PAGSTYTWRNVFNETDQAILTISRFMECVNLDKLEPVANEERLVNKSMGLLHNQKFWAGI
VFPDIAHSNSTELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEQGIIRAITGTKEKTGIYIQQMPYPCFVDDMFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAALLVVLLKMGNLLPYSDP
GVVFIFLASFGIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KLIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEDDSYNLTTSISLMLFDAVLY
GIMTWYFEAVFPGQYGIPRPWYFPFTKSYWCGEKENPNISTPLSKKGNAEVCIEEEPSHI
EPGVYIENLVKVYSHGNKLAVDGLSLRFYKGQITSFLGHNGAGKTTIMSILTGLFPPTSG
TAYIHGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEVEQI
VNDVGLPHKRNARTHTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDYD
LALQSCRNSASTVSYIKKAEKEDSVSESSSDAGLGSEPESETTTIDVSLISNLIFKHVKE
ARLVEDLGHEITYVLPYESAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDAVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEESRETDWLSGSDGKG
SYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALIFSLIVPPFGKYP
SLSLDSSMYGEQFTFISNDIPEDPHINKLHSALTEQPGFGTRCMDGQPSPDSHCTEVGDE
WAAPLVSQSVKEMFDNGNWSMENPSPMCECSCEGRKRMLPECPAGAGGLPPPEMKISETD
TLQNLTGRNISDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSLGARGSQLSSHADQVDEAI
AQLKRRFRLERGTAADRFFHSLSNFMQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNGILR
ANLPSDKDPTKFGITASNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYVVPATLVIIIFMCFQQDSYVSSTNL
PVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSNE
IGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLFA
MAIQGVIFFTITVLIQYHFFFKARSSTSHLKPIGEEDEDVARERQRILNGGGHSDILEIK
ELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSIFKMLTGDSTVTGGEAYLAGK
SVTSEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGLV
KYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILNIVKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRPV
MEFIERELPGSNLKEKHRNMLQYQLPTSLTSLARIFSLLSQNKDTLSIEDYSVSQTTLDQ
VFVNFAKDQSDEDHLKDGLLHKRDAVVVDISQLNTFLKDNTTKESCV
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctccactcaactgggtttactgctttggaaaaacttcacctacagacggaga
cagactgtccagctgctgattgagatcatctggcctctgtttatcttcctcatcctgatc
tctgtccgaattcattatccaccctacgagcagcatgaatgccatttccctaacaaggcc
atgccctcggcgggtacgttgccatgggtacaaggcatcatctgtaacgccaacaacccc
tgcttccgtaatcccaccccaggcgagagtcccggggtggtgggaaacttcaatgattct
ataatctcccgtttgttcactgatgcccagaaaatcctgctctacagtcagaaggataaa
agctacgaaggctacacgggactgctaagggctctcagaaagatgcaggagaacactgct
cgtttcaagctgaaggactttttgcaagacaatgagaccctttcccacttccttcacaac
aacgcctcccttcctcgttacgcgctgaagcagatagtggaggctgacgtcaacttggag
aaggtgctgactaaaggttttggcttccatctcagagacctctgtaacacaacgtccctg
gaggaatttgtccacattgctgatcacaacctgtcccgtcagattcaagaaagtatctgc
aattccaccagcgattggcttgaccaggcccagagccacttcctgtccaacttggacttc
ttcaaacccattcggaaggatgtgaggtcggaccctaaagtggtccaggaagtcgcagca
gcgaccgacagtcttctggagagcctgggagcattggccacggagcttgccagtatgaag
agttggaaggacatgcgtaaggagatcttgtatctaactgtgaacgccacaggatctcct
aaccagatgtaccaggccgtgtcacgtatcgtctgcggacaccccgagggaggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgttcggaaaccat
ggcaacgacagtgacagtgaccaccactcatcttacgacaacacttcaactccctattgt
aacaacatgatgcgtagcctggagtccagccccatttcaaggatgatctggagagctctg
aagcctctgctcatggggaagatcctgtacaccccagatactccggccacacagagaatc
atccacgaggttaataagaccttccaggaactcggcctgctgagggacctcggagggatg
tgggaggagatgaggcccaaagtgtggaatttcatggaaaatggagaggaaatagatatg
gtcaggacgctgctccagaatagcgccagtgccgcattccttaacaaccagctcagtggg
actgagtggcgtgtgtcagatttgtccgccttcctgtcaaaagtctcagaagacaaaaga
cctgcaggatccacctacacttggagaaacgtcttcaacgaaaccgaccaggccattctg
accatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtagccaatgag
gagcgactggtcaacaagtccatgggtcttctgcataaccagaagttctgggctggaatc
gtgtttcctgacatcgcccatagcaacagcactgaactgcctcccaacgtcaactacaag
atccgcatggacatcgataatgtggagaggaccaacaagatcaaggatggttattgggac
cccggtcccagggcagaccccttcgaggaccttcgttacatctggggcggattttcttac
ctgcaggacgtcatcgagcagggaatcatccgagccatcactggcacaaaagagaagaca
ggaatctacatccagcagatgccctacccctgctttgttgatgacatgttcctgagggtg
atgagtcggtccatgcctctcttcatgaccctggcgtggatgtactctgtggccatcatc
atcaagggcgtcgtctacgagaaggaggcccgcctcaaagagaccatgaggatcatggga
ctgaataacggaaccctgtggctgagctggttcatcagcagtttgatcccacttctgatc
agcgccgccttgttggtggtgttattgaagatgggcaacctgctgccttacagtgaccca
ggcgtagtgtttattttcctggcatccttcggcattgttaccatcatgcagtgtttcctc
atcagcactctcttctctcgcgccaatctggcagccgcctgcggtggcatcatctacttc
accctctacctaccctacgtgctgtgtgtcgcctggcaggactacgtgggctttggagca
aaactcattgtgagtctgctctctcctgtggcgttcggttttggctgtgagtacttcgcc
ctgtttgaggagcaaggggtgggcatccagtggtccaacctgctggccagccccctggag
gacgacagctacaacctgaccacctccatctccctcatgctgtttgacgctgtgctctac
ggaataatgacctggtactttgaagctgtgttccctggtcagtatgggatccccaggccg
tggtatttccctttcactaagtcgtactggtgtggagagaaagaaaaccccaacatctcc
acccctctgtcaaagaagggcaacgctgaagtttgtattgaggaggaaccaagccacatc
gagccaggtgtttacatcgagaatctggtgaaggtgtacagccatggaaacaagctggct
gtagatgggctgtccctgaggttctataagggacagattacctccttcctcggacacaat
ggagctggcaagaccaccattatgtcaatcctcacagggttgtttccacccacatctggc
accgcctatatccacgggaaggacatccgcagcgaactcagcaccatcaggcagaatctg
ggcgtctgtccgcagcacaacgtacttttcagcatgctgacagtcgaggaacacatctgg
ttctacgcccgtctgaaggggctgtcggaggaaaaggtgaaggcagaggtggaacagatt
gtgaacgatgtcggactgcctcacaaacgaaacgctcgcacccacaccctgtctggaggg
atgcagaggaagctttcagtggccctggcttttgttgggggttcaaaagtggtgatccta
gatgaacctactgctggagtcgatccctacgcacgcaggggcatctgggacctgctgctc
aaatacagacaaggccgcaccatcatcctctccacccatcacatggacgaagccgacatc
ctgggtgaccgcatcgccatcatctcccacggcaagctgtgctgcgtaggctcctccctc
ttcctgaagacccagctgggcacgggctactacctgaccctggtcaagagagactacgac
ctggcgcttcagtcctgcaggaactctgccagcaccgtgtcctacatcaagaaggccgag
aaggaggacagcgtatcagaaagcagttcagatgctggtctaggcagcgaaccggagagt
gaaaccaccactattgatgtgtcgcttatctccaacctgatattcaaacatgtcaaagag
gctcgcctggttgaggaccttggtcacgaaatcacctacgtcttgccctacgaatctgct
aaagacggagcctttgtcgagcttttccacgagctggatgacagactcaccgacctggga
atatccagctatggaatatctgataccaccctggaagagattttcttgaaagttgctgag
gacagtggagtggatgctgttgagctttcagatggagttgttccaaccaggactcgtcgc
catcatgcattcggagaccaccagagctgcctgaagcccttcactgaagacgactttgat
ttcaatgactctgaagaatcccgtgagactgactggctcagtgggtcagatggaaaaggc
tcataccaggttaaaggctggagtctgaagagacagcagtttgttgctctcctctggaaa
cgattcctctacgctcggcgctccaggaaaggcttctttgctcagattgttctcccggcc
gtgtttgtgtgtatcgccctgatattcagtctgattgtccctccgtttggaaagtaccca
agtctatctctggattccagcatgtatggagaacagtttaccttcatcagtaatgacata
cctgaagatcctcacatcaacaaactacacagcgctctcacagaacagccaggatttggg
acacgttgcatggatggacaaccctcaccggacagtcactgcactgaagttggggacgag
tgggcggcccctctggtctctcaaagtgtgaaggaaatgttcgacaatggcaactggtct
atggagaatccctcccccatgtgtgagtgcagctgtgaaggacgcaagaggatgctcccc
gagtgtcccgctggggccggggggcttccaccaccagagatgaagatcagtgagacggac
actcttcagaacttgactggcaggaacatctcagactatctggttaaaacctacgctcag
atcattggcaagagcctaaggaacaagatttgggtcaacgagttcagatacggtgggttc
tcgctgggcgccaggggttctcagctttcatcccatgcagatcaggttgatgaagcgatc
gctcagctgaagagacgtttccgcctggagagaggaactgcagcggatcgtttctttcac
agtctctccaattttatgcaagggttggacaccaagaacaacgtcaagatctggttcaac
aacaagggctggcacagcatcggttctttcctcaatgtgatgaacaatggcatcctgcgg
gccaatctgccatccgacaaagaccccactaagtttggcatcactgcctccaatcacccg
ctcaacctcaccaaggagcagctgtcccaggtcgcattgatgacgacatcagtggacgtg
ctggtttccatctgcgtgatcttcgccatgtcctttgtccctgccagttttgtggtcttc
cttatccaagagagagtcaacaaagccaagcacatgcagttcatcagcggagtgcagcct
ctactttactggctggccaactttgtctgggatatgtgtaactacgtcgtcccagcgaca
ctggtcatcattatcttcatgtgtttccaacaagactcctacgtctcctccaccaatctg
cccgtgctggcgctgctgctgctgctctacggatggtcgatcacccctctgatgtacccg
gcctcgttcttctttaagatccccagcacggcctacgtggttctgaccagcgtgaacata
ctgataggaatcaatggcagcgtctccacatttgtactggagctatttggaagcaatgaa
atcggtggcatcaacgacatcctgaagaacgtgttcctcatcttccctcacttctgtctg
ggcagaggactgatcgacatggtgaagaatcaagcaatggccgacgctttggagagattt
ggtgaaaaccggttccgctcccctctggcctgggacatggtgggcaagaacttgtttgca
atggctatacagggagtgatcttcttcaccatcaccgtcctcattcagtaccacttcttc
ttcaaggccaggtcttccaccagtcatctgaagcctattggagaggaagacgaggacgtg
gccagagagcggcagaggatcctgaacggaggaggacattcagacatcctggagatcaaa
gagctcaccaagatctacaagaggaaacagaagccggcagtggatcggctgtgtgttggc
atcccccccggagagtgttttggattgctaggagtgaatggggcagggaaaaccagcatc
tttaaaatgctgacaggagactccacagtcaccgggggagaggcctacctggctggcaag
agtgtgacttcagagatagacgaggtgcatcagaacatgggctactgtcctcagtttgat
gccatcaacgacctgctgaccggcagagagcacctcgagttttacgccatcctgagggga
gtgcccgagaaggaagtctgcgaggtggcagagtggggcatccgtaaactgggtttggtc
aaatatgtggacaagtcagcaggcagctacagtggaggcaacatgaggaaactgtctact
gccatcgctctcataggaggaccgcctgtagtctttttggatgaaccaacgacaggcatg
gatcctaaagcacggcgcgctctgtggaacgccatcctgaacatcgtcaaggagggacga
tctgtagtcctgacctctcatagcatggaggagtgtgaagcgctttgcaccagaatggcc
atcatggtcaacggcaggttccgctgtctgggcagtgtgcagcatctcaaaaacaggttt
ggggatggctacaccatcatcctgcgggtggcgggcccagacccggacctccggccggtg
atggagttcatcgagcgggagctcccaggcagcaatctgaaggagaaacacagaaacatg
ctgcagtaccagctgcccacctccctcacctcgctcgcccgcatcttctccctgctctct
cagaacaaggacaccctgagcatagaggactactccgtctcacagacaactttagaccaa
gtgtttgtaaatttcgccaaggaccaaagtgatgaggaccatttgaaagacggccttcta
cacaaacgggatgctgtggtagtggacatttcacagctgaacactttcctaaaggacaac
acgaccaaggagagctgcgtctga
DBGET
integrated database retrieval system
