Gymnodraco acuticeps: 117561436
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Entry
117561436 CDS
T09661
Symbol
zmp:0000000846
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04510
Focal adhesion
gacu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117561436 (zmp:0000000846)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117561436 (zmp:0000000846)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117561436 (zmp:0000000846)
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117561436 (zmp:0000000846)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_2nd
Pur_ac_phosph_N
hEGF
FN3_Tor_3rd
EGF
DUF4998
NDNF_C
Fn3_VIN3
PmbA_TldD_1st
Motif
Other DBs
NCBI-GeneID:
117561436
NCBI-ProteinID:
XP_034094746
UniProt:
A0A6P8VUU0
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MGARGILGCLLLTALLSLSNAGLVKKILRHRRQTLESPKKGHNITLPSADRPVVFNHVYN
INVPASALCSEDVDTPESTDLHPTNAAVVSGLPGTEHTVNGENQIVFTHRINIPRRACGC
TDDMPGLKELLSRLEMLEGEVSTLRDQCGSSQVTGKLGTKPYCSGHGNYSTETCGCICEP
GWKPPNCSDPECPNDCQDRGLCVGGKCVCFKGFTGKDCALDDCPVDCGTYGQCVGGECIC
SYGYYGEDCSQTKCLNNCQGRGRCEDGDCVCDEPWTGPDCSELICPKACYDRGRCVNGTC
YCNEGFTGEDCGEHTCPNNCLSNGYCVDGKCVCAAGFNGEDCSRVICLNDCNDRGTCFNG
MCICDAGYQGADCSQLACLNNCNNRGQCINGQCDCDVGFQGDDCSELSCPNDCRHRGRCV
NGQCVCEEGFAGEDCSIRTCPSNCYGRGECIKGRCVCHSGFTGEDCAELSCPNNCQNRGR
CIDGQCVCDEGFSGEACGQKACPNDCLARGSCVDGKCICPEGYSGDDCSVHACPGDCNNR
GHCINGKCTCEAGYEGESCADLSCPNNCQDKGHCENGQCVCDEGYIGEDCSEVSSPKDLT
LGEVTPDTVDLNWENEMLVTEYLVTYVPTRTGGLQQEFIVPGDKTAATVKELEPGIEYLI
SVYAVLSNKKSIPVSARVATALPQPEGLIFKSVRESSVEVMWDQVDISFDGWEIYFRNTK
EENGKIVSTLPPDQNQFIQSGLGPGQEYEVSVNIIKNNTRGPQTIEKVMTKIDGPRQVEV
KDVTDSSALVSWSLPVAPMDRLTLAYRPSSEPSQEAIVGVSIPETQYSIDSLKPDTEYTV
SLISRRTDVSSDPVIATFTTALDAPKDLKAVSQTDESITLQWTNSQADVGNYLVKYTPLS
GATHGEELFPRGPGDTTKATITGLKPGTEYGIGVTAVKNDRESFPATTNAATDIDPPRDF
KEIESTETSLTLSWQKPQAKVGAYSLVYVSRDGEVEQVEIPPTETSHVLYNLIPGMSYTV
TLAAERGLKRSTPVTLSATTAEELKPMVGNLTISDITWDGFTASWSPMGGEFESFVIEVT
NLDNFKESQNLSLSGDAFSLGLSGLNPNTSYMVGLFGMYQGSFLEPVYTEATTEAEPEVE
HLFVSDATAEGFRLSWTSDEDLFDRFVIKIRDSKRLAHPHEYSVRGDERTKVLTGLMSGT
EYEIELSGVTLDRRSQPIFGVAQTGLSTPNGLSFSEVIDSSAVVHWSMPRFPVDNYRITY
VPFEGGSPLMVTVDGDVFEALLPNMSPGRKYQVTVSAMKGLEESDPNTDTVITALDRPQG
LTAANVTDTSALLLWQPSVATVDGYIITYSADSVSPVVEHVSGNTVEFEMGSLVPATHYT
VGVHAMRDAQKSDSADTEFTTDVDPPHDLRAINVQTDGATLTWKPPQAAVTGYILTFDSA
DGVIREVVLSPTASSYNMAQLTDSTEYNVKLQAIAGPQRSRHVTTVFTTIGQLYRHAKDC
AEILLNGETTSGLYTISVGGEESQPIQVYCDMTTDGGGWMVFLRRQNGKLEFFRNWKNYT
AGFGNMSDEFWLGLSNLHKITNSGHYDLRVDMRDEGESAYAQYDKFTIAEPRTRYKVYMG
AYSGTAGDSMTYHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDLSHS
KGINWFHWKGHEHSIEFAEMKIRPNNFRNVENRKKRS
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcacgaggcattctgggctgcctcctcctgactgctttgctcagcttatcaaat
gccgggctcgtgaagaaaatcctccggcatcgacgacagactctggaatcccctaaaaaa
ggacataacatcacgctccccagtgcggaccgtcctgtagttttcaaccacgtctataac
atcaatgttcctgccagtgccctgtgctcggaggatgtggacactccagagagtacggac
ctccatcctacaaatgcagcagtcgtttcaggccttcccgggactgagcacacagtcaat
ggggagaaccagatcgtcttcacccaccgtatcaacataccacgacgggcctgtggctgt
actgacgacatgcccggcctgaaagagctcctaagccgactggaaatgctcgagggagaa
gtttcaacacttagagatcagtgcggcagttcacaggtcacaggtaagttgggaactaaa
ccctactgcagtggtcatgggaactacagcactgaaacctgtggctgtatatgtgagccg
ggctggaaaccacccaactgctctgatcccgagtgtcctaatgactgccaggaccggggc
ctctgcgttggcggaaagtgtgtgtgcttcaagggattcaccggaaaggactgcgcactc
gacgactgccctgtggactgcggtacatacggccagtgtgtgggaggtgaatgcatctgc
tcctatggttactatggcgaagactgctctcaaaccaagtgcctcaacaactgccaaggc
cgtggccgctgtgaagacggagactgcgtttgtgatgaaccctggactggccctgactgc
tctgaactcatctgccccaaagcctgctatgaccgtggacgctgcgtgaatggtacctgc
tactgcaatgaggggttcaccggggaggactgtggagagcacacctgtcccaacaactgc
ctcagtaatggttactgtgtagatggcaaatgcgtgtgcgctgccggcttcaatggagag
gactgctctcgagttatatgcctcaacgactgtaacgacagaggtacgtgcttcaacggg
atgtgtatctgcgatgcgggctatcaaggcgcagactgcagccagttagcatgcctcaac
aactgtaacaacagaggccagtgcataaacgggcaatgtgactgcgatgttggtttccag
ggagatgattgctctgagctttcctgtccaaatgactgccggcacagggggcgctgtgtg
aacggccagtgtgtgtgcgaggagggctttgctggtgaggactgcagcatcaggacctgc
ccttcaaactgctacggccgcggtgagtgtatcaaggggcgttgtgtgtgtcattcaggc
ttcaccggtgaggactgtgctgagcttagctgccctaacaattgccagaaccgcggccga
tgcatcgatgggcagtgtgtttgtgatgaaggcttcagtggggaggcctgtggtcagaaa
gcttgtcccaacgactgcctggcccggggttcctgcgtcgacggcaagtgcatctgtccg
gaaggctactcgggagacgactgctctgtgcacgcctgcccaggtgactgcaacaacagg
ggacactgtatcaatggaaagtgcacgtgtgaggctggatatgaaggggaaagctgtgca
gaccttagctgccccaacaactgccaggacaaaggccactgtgagaacggacagtgcgta
tgcgatgagggatacatcggagaagactgctcagaagtgtcttctccgaaggaccttact
ttaggcgaggtcacccctgacacggtggacctgaactgggaaaacgagatgctggtaaca
gagtaccttgtgacgtatgtgcccaccagaactggtggtcttcaacaagagttcattgtg
ccaggagacaaaactgctgccaccgtcaaagagcttgagcctggcatcgagtatctgatc
agtgtctacgctgttctaagcaacaagaagagcatccccgtcagtgcgcgggtggcaaca
gcacttccacagccagagggtttaatcttcaaatcagtgagagagagctctgtggaggtg
atgtgggaccaggtggacatctcctttgatggctgggagatctatttccgcaatacgaaa
gaagaaaatggaaaaatcgtgagcacccttccacctgatcaaaaccagtttatccagtca
ggacttggaccaggacaggagtatgaagtctctgttaacatcatcaagaacaacacaaga
ggaccccagacaattgaaaaagtcatgaccaagattgacggcccccggcaggtggaggtg
aaggacgtgacggactcctctgctctggtcagctggtctctgccggtggctccgatggac
agactcaccttggcctacaggcctagctctgagccttcacaagaagccatagtgggggtt
tccatcccggagactcagtacagcattgacagcctgaagccagacaccgagtacaccgtg
tcgctcatctccaggcgcacagacgtctccagtgaccctgtcattgccacgttcactaca
gccctggatgcacccaaggacctgaaggccgtgtcacagacagacgagagcatcaccctg
cagtggaccaacagtcaggctgatgttggcaactatctggtgaaatacactcccctctct
ggagccactcatggggaggaactgtttcctcgagggccaggagacaccacaaaagctact
atcactgggctgaagccagggacggagtatgggattggtgtgacggcggtgaagaatgac
agagagagcttccctgctactacaaatgcagcaactgatatcgatcctcccagagatttc
aaagaaattgagtcaacagagacctccctcacgctgagctggcagaaacctcaggccaag
gtcggtgcctacagtctggtgtacgtctccagggatggagaggtggagcaggtggagatc
ccgcccactgagaccagccatgtcttgtacaacctgattcctggaatgagctacaccgtc
actttagctgctgagagggggctcaagaggagcacaccggtcacattatctgcaaccaca
gcagaggagctgaagcccatggtggggaacctcaccatctctgacattacatgggacggc
ttcactgcgtcctggagccccatgggtggggaatttgaaagctttgtcattgaggtaaca
aacttggataatttcaaagagagccagaacctcagtctgtccggagatgctttcagcctg
ggcctctccggactcaaccccaacaccagctacatggttggcctgtttgggatgtatcag
ggctccttcctggaacccgtgtacactgaagccaccacagaggctgagccggaggtggag
catctttttgtgtcggacgccacggctgaaggttttcgtctgtcatggacgtctgatgaa
gacttgtttgacagatttgtgatcaaaataagagacagtaaaagactagcccaccctcac
gagtacagtgtccgcggtgatgaaaggaccaaggttttaactggactcatgagtggcacc
gagtatgaaatagagctttccggtgtcacattggatcgacgctcacaacctattttcggg
gttgctcagacaggcctcagtactccaaatggactgagcttttctgaagtgatagactcc
tcagctgtggtccactggtccatgcctcgctttccagtggataactacagaatcacctac
gtgccctttgaaggaggaagcccgctgatggtgactgtggatggcgacgtgttcgaggct
ctgctgcccaatatgagcccaggcagaaagtaccaggtgactgtgagtgctatgaagggc
ctggaggaaagtgaccccaacactgacactgtaatcacagcgctggacagacctcagggc
ctgactgcagctaatgtcactgacacgtccgccctgctgctatggcaaccgtctgtcgcc
actgtggatggctacatcattacttacagtgctgactcggtgtcccccgtggtggagcat
gtttctgggaacacggtggagtttgagatgggctctctggttcctgcaacccactacaca
gttggagttcacgctatgagagacgctcagaagagtgactctgctgacactgaattcacc
accgatgtggatcctcctcatgatctgagggctattaacgtccaaactgacggtgcgact
ctcacatggaaacctccgcaggcggcagtgactggttacattctcacctttgactctgct
gatggagtaatcagggaagtggtgctaagcccgacagcgtcctcttataacatggctcag
ctcaccgactccacagagtacaatgtgaaactccaggccatcgctggaccccagaggagt
cgtcatgtgaccaccgtcttcactaccattggacagttgtacagacacgctaaagactgc
gctgagattttactgaacggagagacgacctctgggctttacaccatcagcgtgggagga
gaggagagccagcccatccaggtctactgtgacatgaccacagacggaggaggctggatg
gttttcctcagacggcagaatggaaagctggagttcttcaggaactggaagaactacact
gctggctttggaaacatgagcgatgagttctggctgggtctttccaaccttcataaaatc
acaaattctggccattatgatctgcgagtggacatgagggatgaaggagaatcggcctac
gctcagtacgacaagttcacgattgcagaaccaagaacccgctacaaagtctacatggga
gcgtacagtggaacagcaggggactccatgacgtaccaccagggtcgacctttctccacc
tacgacaacgataacgatattgctgtcaccaactgcgccttgtcctacaaaggagccttt
tggtataaaaactgtcatcgtgtcaacctcatggggaaatatggggatctcagtcacagt
aaggggatcaactggttccactggaagggccacgaacactcaattgaatttgcagagatg
aagattaggccgaataacttcagaaatgtggagaacagaaaaaaacgatcatag
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