Gymnodraco acuticeps: 117561708
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Entry
117561708 CDS
T09661
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117561708
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117561708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
BAF250_C
Motif
Other DBs
NCBI-GeneID:
117561708
NCBI-ProteinID:
XP_034095200
UniProt:
A0A6P8WDI6
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MEISEARGASKCVEKMEKEVAPQKRQHCRTTVVNIISSLCSVASIAFCILLSINTADVKN
RVVDLESGNDEHTLIRAPGYSMDDFNSLIEQRVDVLLSQRSYEQFVKIRTARQASPECSC
PPGPPGKRGRRGRNGENGPPGTPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLAGDPGTPGEIGIIGPEGPPG
QKGFLGPAGNPGVDGLKGDVGIPGVDGVPGAKGEMGERGEKGGFGRRWNESDIGEKGDAG
SSAAGIKGEPGESGRGGTKGEPGLPGLPGLPGIKGEPGYLGPQGEPGLPGLPGTKGDRGD
HGPQGKGERGEIGLLGPKGSQGEGGTPGAKGSKGEYGDNGIVGSVGPKGPPGQKGDQGAT
EIVDYNGNIQEALQKITTLTVTGPPGPPGPIGPEGGKGDRGMHGFPGLDGERGYKGSKGD
MGMPGASGDKGGTGLTGLPGVNGMRGDKGDAGLPGLQGSSIIGTPGPSGPHGPPGPMGPH
GFSGAKGESGLHGMKGIRGETGHKGDRGPLGLPGASGLDGKPGIRGQDGPVGPAGPAGPK
GDIGERGASGDPGPRGPYGLPGAAGTPGLDGLQGLIGEKGDVGERGEKGEKGKKGKKGPK
GEKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggagatctcggaggcaagaggagcatctaagtgcgtggaaaaaatggagaaagaagtg
gcgcctcagaagcgacaacactgccgcacaacagtggtgaacattatctcgtctttatgc
tcagtggcgtccatcgccttttgcattcttctgagcattaacacagctgacgtgaagaac
cgggttgtggatttggagagtgggaatgacgagcacaccttgatccgagccccgggctac
tccatggatgattttaattcattgattgagcaacgagtggatgttctgctctctcagcgc
tcatatgaacaatttgtcaagatccggactgccagacaagcatctcctgaatgcagctgc
cctccaggacctccgggaaagcgaggaagaagaggccgcaacggagaaaatggacctcct
ggcactccaggtcccaagggtgaaaagggggatcaaggcgaccagggaccacggatggtc
ttccctaagatcaatcatggctttctttccgctgaccagcagctcataaagcggcgtctc
attaagggagatcaggggcaagctggaccaccggggcctccggggccaccgggtcctccg
gggccgagggggcctccaggggacaccgggaaagacggacccagaggtgtacctggtcta
gcaggagatccagggacgcctggagaaataggaattatcggacctgaggggccaccaggg
cagaagggttttctcgggcctgctggaaatccaggtgttgatggactgaagggggatgtt
ggcatcccaggagtggacggagtccccggagctaagggtgaaatgggagagcgaggtgaa
aagggcggatttgggcgaagatggaacgaaagtgatataggggagaagggagatgcaggc
tcctctgcagctggcatcaagggagaacctggagagtctggacgaggtggaacaaaggga
gagccaggacttccagggctgcctggactcccagggataaagggtgagcctggatacctc
gggccccagggagagccagggctcccaggactcccaggaactaagggtgacagaggcgac
cacgggccacaaggaaagggagaaagaggagaaattggactcttgggaccaaagggttcc
caaggagaggggggtacacctggtgctaaagggtcaaagggggaatatggagataacgga
atcgtgggatctgttggaccaaagggcccccccgggcagaaaggagaccaaggagccaca
gaaatcgtcgactacaacggaaacattcaggaggctttacagaagattaccactcttaca
gtaacgggtccacctggaccgcccgggcccatcggaccggaggggggcaaaggggatcgt
gggatgcatggcttcccgggactcgatggggaaagaggctacaaaggctctaaaggagac
atggggatgcccggagcttcaggggacaaaggaggaactggtttaactggcctacctggt
gtgaacgggatgagaggagacaagggggacgcaggtctgcctggtcttcaaggttcttca
atcattggcaccccagggccatcagggccccacggacccccgggacccatgggtccccat
ggtttctctggagcaaagggtgaatctggtttgcacggtatgaagggtatccgaggagaa
acaggacacaaaggggaccgcgggccgctgggtctgcccggagcatccggcttggacggc
aagcccggaattaggggccaggacgggcctgtggggccagcggggccggcggggccaaag
ggcgacatcggtgagagaggagcgtcaggcgatccaggaccaaggggcccttacggactt
cctggagctgctggaacaccaggcctggatgggttgcaaggcttaataggagagaaaggc
gacgttggggaaagaggagaaaagggggagaagggaaagaagggcaaaaaagggcctaag
ggcgagaaaggagaacagggggcccctggattagatgcaccctgcccattgggcccagat
ggattaccaatgcctggatgctggcagaagtga
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