Gymnodraco acuticeps: 117561812
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Entry
117561812 CDS
T09661
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
117561812 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gacu04040
]
117561812 (cngb1a)
Ion channels [BR:
gacu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117561812 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Gp5_trimer_C
Motif
Other DBs
NCBI-GeneID:
117561812
NCBI-ProteinID:
XP_034095303
UniProt:
A0A6P8W8H2
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MLSWVAKVVPQPPEPPPKNVEEQKLGKPVTTPPAEKKVTFLDESKQQAQKDGKPKQEVQA
AESGPEPVAQSGVFTWFNATLPKPALPPNLSRANSVEKEQNTTTRKGMMAWISEGLEKVV
PQPDLKKETPAEPEQHTEVSVAAPAKPAEPQINVEEREEHTDNRLLPPRMIDWIKQGLEK
VVPQPKTDIMEKTEAPAVAKAPEPAPETKAAPEIEKSSKEGEMQANIMGWVGRMLPQPAL
RLDAGCDQVQNISIAQKESDLVLEDMEEDVEEDVEEDVEEDVEEDVEEDVEEDVEEEKDE
NIDDKQNEKKLECRNAETQVDQSPPVMDSAKEEAEEEGQDNMEERLQQHQLEEARVAEEI
ARTAAEEAVRQLEAEQSAKLVVETVPVCNEPLPNIQEEENEEPKSLKEVSPAEEETPPPP
STHVEPASEKKDLESPEQIIPEPESQPPETPPTLQVEAAESECGVPEVCIPIKSFLLRFP
LAVECLERGRKLMHDHNLAPPHAVHADPPSGARHADPGAAAAFLTGSGAQGLGGAPVLRV
EDVDWEEGQETNLNIPRIITTPEPELSTPMSHLSAAGVEDDAVMKADREDNEMRPPSLPG
VGSVLLQERLLQLVRMFKGRAERQKERLLDLDESEEDSPPATPSKPPPPPPPPPEDPPAE
EDEDEEEEEEEFFLPFDILGHPVKIPKLPVMPDWLRAVAAYRFPSSIDQFTDSIYVIWLF
FVVAAWNWNVWLIPVRWAFPYQTAANVHLWLMADYTCDLIYITDILVFQPRLQFVRGGDI
VCDKKDMRENYMKTERFKMDVLSLFPLEILYYFTGVNSLLRFPRMLKYMAFFEFNDRMEA
VMKKAYIYRVIRTSTYLLYSLHINACLFYVGSDYEGLGSTKWVYDGKGNAYIRCYYFAVK
TLITIGGLPDPTTVFEIYFQLINYFVGVFAFSIMIGQMRDVVGAATAGENYYRATMDSTM
KYMNSYNIPAPVQNRIRTWYDYTWKSQGMLDEQELLVQLPVKMRLDIAVDVNYAIISKVA
LFQGCDRQMMFDLLTRLKSVVYLPGDFVCVKGEIGRQMYIIQQGAVQVVGGPDLQTVFVT
IRAGAVFGEISLLAGGGGNRRTADVRAHGFANLFILDKKDLAEILVHYPESQKLLRKKAK
TMLSKDKKPDEKVKEVVPPRAETPKLFSAMLKMSQQQGLQGTFSTLRKTFKTSEGTAE
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtggctaaagtcgttccgcagccgccggagcctccgccaaaaaatgtt
gaagagcagaaactggggaaaccagtgaccacgccccctgcggagaagaaagtgacattt
ctagatgagagcaaacagcaggctcaaaaagatggcaaacccaaacaggaagtacaggcg
gcggagagcggcccggagcctgtcgctcagtccggagtgtttacgtggttcaacgccact
ttgccgaaacctgcactcccaccaaacctgagccgggccaactccgtcgagaaggagcaa
aacacaacaaccaggaaagggatgatggcctggatctctgagggtttggagaaagtcgtt
cctcagcccgacctgaagaaggaaaccccagcagagcctgagcagcacactgaggtgtcg
gtggcagcacctgcaaaacctgcagagcctcagatcaatgtggaggagcgagaggaacac
actgacaacagactcctcccccccaggatgatagactggatcaaacaaggtttagagaaa
gtcgtccctcagccgaagacagacatcatggaaaagactgaagctcctgctgtagcaaaa
gcaccagaaccggctccagaaacaaaagcagctcctgaaattgagaagtcttcaaaggaa
ggagagatgcaggccaatattatgggatgggtcggccgcatgcttcctcagcctgctctg
aggctggacgccggctgtgaccaggtgcagaacatcagcatcgcgcagaaggagagcgat
ctggtgctggaggacatggaggaggacgtggaggaggacgtggaagaggacgtggaggag
gacgtggaagaggacgtggaggaggacgtggaggaggacgtggaagaggaaaaggacgag
aacatcgacgacaagcagaatgagaagaagttggaatgcagaaacgcagagacccaggtg
gatcaatcccctccagtgatggacagcgccaaggaggaggctgaagaggagggtcaggac
aacatggaggaaaggcttcagcagcaccagctggaggaggctcgcgtcgcagaggagatc
gccaggacggcagcggaggaggccgtccggcagctggaggcggagcagtcggctaaactc
gttgtagagacagtgccagtgtgcaacgagccactacccaacatccaggaggaggaaaac
gaggaaccaaagagtctgaaggaggtcagtccagctgaagaagagactcctcctcctccg
tcaactcatgtggagccggcatcggagaagaaagatctggaaagtcccgaacagatcatc
ccagagccagagtcacaacctccagaaaccccccccacacttcaggtcgaagctgcagaa
agtgaatgtggagttcccgaggtttgtatcccgataaagagttttctgcttcggttcccg
ctcgctgttgagtgcctggagcgcggcaggaagttgatgcacgaccataacctggccccc
ccccacgctgtccatgccgaccccccctccggagctcgccatgctgacccaggagctgca
gcagctttcctcacaggaagcggtgctcagggtttgggtggagctccagtgctgagggtg
gaggatgtggactgggaggaagggcaggaaacaaacctgaacatcccccgaattatcaca
actccagaaccagagctcagcacccctatgtcacacctcagcgctgcaggtgtggaagat
gatgcagtgatgaaggccgatcgagaggacaatgagatgcgtcctccgtccttaccgggc
gtgggcagcgtgttgcttcaggagcgtctgctgcagctggtccggatgttcaaaggtcga
gcggagcgtcagaaggagcgtcttctggacctggacgagtccgaggaggacagtcctcca
gccactccgagcaaacccccccctcctcctcctcctcccccagaggacccgcctgcagaa
gaagatgaagatgaggaggaggaagaggaggagttttttctcccctttgacattttgggg
catccggtgaaaatccccaaactccccgtgatgccggactggctccgagccgtcgctgcg
taccgcttcccctccagcatcgaccaattcaccgattcgatctatgtgatctggctgttc
ttcgtagtggcggcgtggaactggaatgtttggttgatcccggtgcgctgggcgttcccg
taccaaaccgccgctaacgtccacctgtggctaatggccgactacacctgcgacttaatc
tacatcaccgacatcctcgtcttccagccacgcctgcagttcgtccgcggaggagacatc
gtgtgtgacaaaaaggacatgagagaaaactacatgaagactgagagatttaagatggac
gtcctcagtctgtttcccctggagattctttactatttcaccggagtgaactccctgctc
agattccctcgtatgctgaagtacatggctttctttgagttcaacgaccgaatggaggcc
gtgatgaagaaagcgtacatctacagggtgatccggacctccacctacctgctatactct
ctgcacatcaacgcctgcctcttctacgtgggctccgactacgaaggactgggctccacc
aagtgggtctacgatggaaaaggcaacgcttatatccgctgctattactttgcggtgaag
acgttgatcaccatcggaggactgccggacccgaccaccgtcttcgagatctacttccag
ctcatcaactacttcgtgggcgtctttgcgttttccatcatgatcgggcagatgagggat
gtggtcggggccgccacggccggagagaactactaccgagcgactatggacagcacgatg
aagtacatgaactcttacaacatccccgcacccgtccagaaccgcatccgcacctggtac
gattacacctggaagagccagggcatgctggatgaacaggagctcctggtgcagcttcct
gtaaagatgaggctggacatcgctgtggacgtcaactacgccatcatcagtaaagtggcc
ctgttccagggctgtgacagacagatgatgttcgacttgctgaccagactcaaatctgtc
gtctacctgcccggagacttcgtctgtgtgaagggggagatagggcgtcagatgtacatc
atccagcagggggcggtgcaggtggtggggggtcctgacctgcagacggtgttcgtcacc
atcagagcgggcgctgtgttcggggagatcagtttgctggcgggaggcgggggtaaccgg
cgcacggccgacgtgagggcgcacggcttcgctaacctcttcatcctcgacaagaaggac
ctggcagagatcctggtgcactaccccgagtcccagaaactcctccgcaagaaggccaag
acgatgctgtccaaggataagaagccggacgagaaggtcaaagaggtcgtcccgccccga
gcagaaacccccaaactgttctcggcgatgctgaagatgtcgcagcagcaaggactccag
ggaaccttcagcactctgaggaagaccttcaaaacctctgaaggcaccgcagag
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integrated database retrieval system
