KEGG   Gymnodraco acuticeps: 117562160
Entry
117562160         CDS       T09661                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gacu  Gymnodraco acuticeps
Pathway
gacu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gacu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117562160 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gacu03400]
    117562160 (xrcc1)
DNA repair and recombination proteins [BR:gacu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117562160 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 117562160
NCBI-ProteinID: XP_034095879
UniProt: A0A6P8VXM2
LinkDB
Position
Unknown
AA seq 630 aa
MPEIQLKHVVSCSTEDTAHKADNLLSSDTYRKWKAARSGEKQTSVILQLEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNMNRVRFFGPQQLQKSAT
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPLPTTSPKLTKLGQFRVKEEPPSS
APSLQPGSLFFNRDHATKSTTSPKVSPPSERLSYAAAALQAGGSHSSGGGPPSSGPLPSS
SSASPQPPAKRTFEFSKEQKSSSGPPPSKKSSPAVSPEGKAAAPKPKPSPAGTPSSSTPK
ASPAQKSAEKNRESHSKPDPKPKQPKASVQQVPFKRILEGVVFVLSGFQNPIRGDLREKA
VDMGAKYRPDWTPDATHLICAFSNTPKYSQVKSAGGIIVRKEWVLDCHKKKQKITYKQYL
MDGAESSSESEMEVDEQSEEEVSTKTPPKQQRQVTPKKTPEKKKDEDEYAGSTDVDEPGS
GDEESAVDTEDELQRVEHESREKKASSDMKVKQEDPFGGSTDENTDAEAEEDLPIPELPD
FLRGKHFFLYGKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMEN
GNLNFVKPAWIYAINERQKILPYQPYSVVP
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgccagaaatccaactcaaacacgtcgtgtcttgcagcaccgaggacactgcacacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaagatccggggag
aagcagacatcagtcattctacagttagagaaggaggagcaggtgcacagcattgatatt
ggaaatgaaggctctgctttcatcgaggtgctggtggggaattcttcagctgtcagagat
caggactatgaggttctcttggttacgtcttccttcatgtcgcccacggagagtcgtaac
ggcaccaacatgaaccgagtgcgtttctttgggcctcagcagctgcagaagagcgcgact
caggagaagtgggacagagtgaaaattgtgtgcagccagccatacagcaagaacatagca
tacggactggcctttgtgaagtttcattcaccgcctgacaaaaatgatcctcttccaaca
acctccccgaaactgacgaagctgggacagttcagggtgaaggaggagcctccgtcctcc
gctcccagccttcagcctggcagtctcttcttcaatcgggaccatgcaacaaagtccact
acctcaccgaaagtgtctcctccgagtgagaggttgagttacgctgctgctgcgctgcag
gctggcggctcccactcctcaggtggcggccccccctcctcaggcccgcttccctcctcc
agctcggcctcaccgcagccacctgcaaagagaacatttgagttcagcaaagagcaaaag
tcttcctccggccctcccccctcgaagaaatccagcccagctgtctcacctgaggggaaa
gctgcggcccccaaacccaagccgagccccgccggcacgcccagctccagcactccgaaa
gcgtcgccggcacagaagtctgctgagaagaatcgagagagccactctaaacccgaccct
aaacccaaacaaccgaaagccagcgtgcagcaggtccctttcaaacgcatcctggagggg
gtcgtgtttgtcctcagcggcttccaaaaccccataagaggggatttgagggaaaaggct
gtggacatgggagccaaatacagacctgattggacccccgacgccacacacctcatctgt
gccttctccaacacccccaagtacagccaggtgaaatcagcagggggcatcatcgtgcgg
aaggaatgggttttggactgccataagaaaaaacagaagatcacctataaacagtatctg
atggatggagcagagtcaagctcagagagcgaaatggaagtggatgaacagagtgaagag
gaagtgagcacaaagactccaccaaagcagcagagacaagtgaccccgaaaaagacgcca
gagaagaagaaagacgaggatgagtatgctggctcaaccgatgtggatgaaccaggaagt
ggagatgaggagtctgccgtggacactgaggacgagctgcagagggtggagcacgagagc
agagagaagaaagcttcatcagacatgaaggtgaagcaggaggatccgttcggggggtcc
acagacgaaaacacagacgctgaggctgaagaggatctccccatccctgagctcccagac
ttcctgagaggaaagcactttttcctctatggtaaatttcccaacaacgagaggcgcctt
ctgctgagatacattgttgccttcaacgggctgatcgaggactacatgacggagaaggtg
cagtttgtggtgaccagtgaagggtggcacgactcctttgaagacgcgctgatggagaac
ggcaatctaaactttgtcaaacccgcatggatttacgcaatcaatgaacgacaaaagatt
ctgccctatcagccctactccgttgtcccctga

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