Gymnodraco acuticeps: 117562335
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Entry
117562335 CDS
T09661
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117562335 (taf1c)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117562335 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
117562335
NCBI-ProteinID:
XP_034096038
UniProt:
A0A6P8WAF8
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MTNTMDYQFPEQLYPSFYNCGPPDLVLKHCAGNWGCYDGVRPQGGSGPLSSWTFTSRHQV
RGETWRHTEPAPVPLLPPKHSVLWPSTPPDPQDFPEHMQNFFMDHCQDAFGSMSEILNED
FIFKQGTKKMSRIDSVYMRKMESLIKKGKLKKRPLSFPSKVLNTYGSMLSDVLAAVPPAL
LGSLLFEELKEQRERMLFSEAATGGALAFVPFSQSSSDSQSGCLLYPGNQGLDCLNFQGV
ELQQHRGTPPCLNTSSSNLSSFQLKAPVRQISTASLINNCCVAVRSDHLCGVWRFSEGNK
PQLMEVVNTKEVATCISVSPHVLGEVLVASESGAVDLWTVGRGMQRVREEEENLYFNAKS
SWRWCEFSAHPRVMVYADRTGVELTDIRVSPVSNHTLFRISNTAECRSGERLILSRYLAD
IHPFHHLITTQHSAYIMDERFPCVHMLKWDHMMQSPPMFCHTFPGSASSRTAKVLLGSHS
SQEITLLQYSGGKAEACSSRGPPQALLRPRDSLRHLPVQLPHRLELATSRLSSPAAGLTC
IQKRGGGEAGGEECICILQLTEAGDIFYQILEHEQSHTPPPAMEKNTISEINPAQQPPQS
LRLISEVSSDEDIIGPTQTQSFVAETQEEERPELDMYAFSNESWSPRKSRRIKNLQLQVI
VNDYDNDETVSGLDTGLNEETVSEEKADIPEEPSRVEETTSGSQKLSDGVLVTWKQWLQK
LMQKSHKNKPRPQLRQPFKITTKELIYLSSDDEARGEDSEEKERVENVRRDLRACMTNRS
LLVHSAVSASLGDQEVVEVPDAVNTDDWGDPTSERFTVSWQGEGAWQAWWVENLGLNREK
KVEALRRKRRREKEVRRASSQRSVLSSSFCSSLSYQSDLSDFSDLSGWSSSASLGAWSDS
EGGLSQSEGSVGSGIPRAATPSSSQTDPTPQPGNQTPTSQPGNQTPSSQPGNQTPTSQRG
NQTPTSQPGNQTPTSQRGNQTPTSQPGNQTPTSQRGNQTPTSQPGNQTPTSQPGNQTPTS
QPGNQTPTSQPGNQTPTSQRGNQTPTSQRGNQTPTSQRGNQTPTSQRGNQTPTSQRGNQT
PSRTNAPPNTPKPLDSTPATVRRSKPQEDYLSALFAPQVRGRGNDYRSFSSTQKLWWRVR
LRFGKAK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatacaatggattaccagttcccagagcaactttacccttcgttttacaactgc
ggacctccagacttggtcctgaaacactgtgcaggaaactggggctgctacgacggagtc
cgacctcagggtggctctggtcctctctccagctggacctttacctccaggcatcaggtc
agaggggagacatggcgtcacacagagccagcaccagttcccctcctgccccccaaacac
tctgtcctctggccttcgacgcctccagatccgcaggatttcccagaacatatgcagaac
ttcttcatggaccactgccaggatgccttcgggagcatgagcgaaattctgaatgaagac
ttcatcttcaaacaaggaacgaaaaagatgtctcgcattgactcagtctacatgaggaaa
atggaaagcctcatcaaaaagggaaagttgaaaaagcgtccgttgtcgtttccctccaag
gtgctgaacacgtacggctccatgctgtcggacgtgttggccgccgtgccccccgccctg
cttggctccctgctgttcgaggagctgaaggagcagagggagcgcatgctgttctctgaa
gcagccacagggggcgctctggccttcgtccctttctcacagagcagcagcgactctcag
agcggctgcctcctctaccccgggaaccaggggctggactgcctcaacttccagggagtg
gagctgcagcagcacagagggacccccccctgtttgaacaccagcagctctaatctgtcg
agcttccagctgaaggcccccgtcagacagatcagcaccgcctcacttatcaacaactgt
tgtgtggccgtgcgctcggatcacctgtgtggagtctggaggttcagtgaaggaaacaag
cctcagctgatggaagttgtcaacaccaaagaggtcgccacctgcatcagtgtcagtcct
catgttctaggtgaagttctggtggcgagtgagagcggagcggtagacctgtggaccgtc
ggcagagggatgcagagggttcgggaggaggaggaaaacctgtacttcaacgccaagtca
tcatggcgatggtgcgagttctccgcccaccccagggtgatggtgtatgcagacaggacg
ggggtggagctcactgacatcagggtgagtcctgtctcaaatcacactctgtttcgtatc
agcaacaccgccgaatgtcgcagtggagagagactcatcctgtccagatacctggcagac
atccaccccttccaccacctcatcaccactcagcactcggcctacatcatggacgagcgt
ttcccctgcgtgcacatgctcaagtgggatcacatgatgcagtctccaccaatgttctgt
cacactttccctggctccgcctcctcccggaccgctaaggttctgctgggctcccacagc
tctcaagaaatcaccctgctgcagtactcaggggggaaagccgaagcctgttccagtcgg
ggtcctcctcaggcgctgctcagacccagagacagcctgagacaccttcctgtccaactc
cctcaccgcctggagctggccaccagcagactgtcctcaccggcagcaggtctgacttgt
atccagaagagaggaggaggagaggcagggggcgaggagtgtatctgtatcctccagctg
acggaggcgggggatattttctaccagatcctggagcacgagcagtcgcacacccctcca
ccagctatggagaaaaacacaatttcagagataaatccagcccaacaaccaccacagtcg
ttgaggctcatatcggaagtatcgagcgacgaagacataatcggcccgactcagacgcag
agctttgtggctgaaacacaggaggaggaacggccagaactggacatgtacgctttctct
aacgagtcctggtccccaagaaagtcccgccgcataaagaatttgcagctgcaggtcatc
gtcaatgactatgacaatgatgaaaccgtgagtggactggacacaggtttgaatgaggaa
accgtgagtgaagaaaaagctgatattccagaggaacccagccgtgtggaggaaacaaca
agcggcagccagaagctcagcgacggtgttctggtcacatggaaacagtggctgcagaaa
ttgatgcaaaagagtcacaagaataagccccgcccacagctcaggcagcccttcaaaatc
acaactaaagaactcatctacctgtcgtctgacgatgaagcgagaggagaggattcagag
gagaaggagcgcgtggagaacgtgaggcgggacctcagagcgtgcatgaccaaccgctcg
ctgctcgttcacagcgccgtctccgcctctctcggagaccaggaggtggtggaggtgccc
gacgcggtgaatactgacgactggggggatccgacgagcgagcgcttcactgtctcctgg
cagggggagggggcctggcaggcgtggtgggtggagaacctggggctgaacagggagaag
aaggtggaggctctgaggaggaagaggaggagggagaaggaggtgaggagagcgtccagt
cagcgctcggtgctgtccagcagcttctgctcgtctctgagctaccagtcggacctgagc
gacttctcagatctgtccggatggtcctcgtccgccagtttgggggcgtggtccgacagc
gagggggggctgtcccagtcggaggggtctgtagggagcgggatcccacgagctgcaaca
ccctcctccagtcaaacagaccccacgcctcaaccagggaaccagaccccaacttctcaa
ccagggaaccagacccccagttctcaaccagggaaccagacccccacttctcaacgaggg
aaccagacccccacttctcaaccagggaaccagacccccacttctcaacgagggaaccag
acccccacttctcaaccagggaaccagacccccacttctcaacgagggaaccagaccccc
acttctcaaccagggaaccagacccccacttctcaaccagggaaccagacccccacttct
caaccagggaaccagacccccacttctcaaccagggaaccagacccccacttctcaacga
gggaaccagacccccacttctcaacgagggaaccagacccccacttctcaacgagggaac
cagacccccacttctcaacgagggaaccagacccccacttctcaacgagggaaccagacc
cccagcagaaccaacgcccccccaaacacacctaaacctctcgactccaccccggccact
gtgaggaggagcaaaccccaagaagactacctcagcgctctgttcgcaccgcaggtaaga
gggaggggtaacgactacagatctttctcgtccacacagaagctttggtggcgcgtgagg
ctcaggtttgggaaggctaaataa
DBGET
integrated database retrieval system
