Gymnodraco acuticeps: 117562906
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Entry
117562906 CDS
T09661
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117562906 (smarcc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117562906 (smarcc1b)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117562906 (smarcc1b)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117562906 (smarcc1b)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117562906 (smarcc1b)
PBAF complex
117562906 (smarcc1b)
GBAF(ncBAF) complex
117562906 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
117562906
NCBI-ProteinID:
XP_034096754
UniProt:
A0A6P8VZR3
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MATMSGGTNLGIPGARLASSGTSAHRKKDSSPSARFWESPETLAQLEVVRQWIGKHYKKY
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATSPVLTKLPAQSFLDLRPAGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFGAIGISLIQNNGMSLPVVYVDPTLDQELVSRLTD
VIAKHQGTLTEDRTLASHHIYPSPASKEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLSS
SDVEGEVEEPPHSEKPWRVHAGWVLDTDVFNEWMNEEDYCVNERNVAIILRRRIHLRDEQ
DSKHTPSKKRRRSISPPSEGRKKGKKGRRRGPQEEEPEEDLTKDMEDPTPVPNMEEVILP
KNVNLKKDSENIPVKGGTMADLDELEEDFPGREDEEGRGDIHRLSEGEDNTTEQTHHIII
PSYTSWFNNNSVHSIEKRSLPEFFHGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTSC
RRILTGDVCSVIRVHSLLEQWGLINYQVDAESKPLPMGPPPTPHFNVLIDTPSGLAPLQH
KPLQVSASQNMLFFQEKSREKPSECQNFGLRSDIYTKKIPKTKGVSGREWTEQETLLLLE
ALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSAASLGPLAYQPVPFSQSEN
PVMSTVAFLASVVDPRVASSAAKAALEEFSKVHEESLDKISEASNQPDKTESMEVEKIET
NSTPLQVPLRTDGLKVEPSVANVTGELVKSENAENILAEEGDGVRVDDDESFDQADVDEG
RLLEQDLVDGSVVTAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHF
EELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEIKVRQQREQQAQPGYTGQPTAVP
PASAQPMPNRMIPGGVNAQTMAPRHPGAPNGMYPSSQPDGIAPAQPGPPAASHN
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgtccggaggaacaaacctcggcattcccggggcaagactagccagctcc
ggaacttccgcacaccggaaaaaagacagcagtccgtccgctaggttctgggagagtccg
gagactttagcccagctggaggtggtgcgacagtggatcgggaagcactacaaaaagtat
gtgctggtggatgctccttcgtgtcaggctctggctgcagtcaccctgcagctcctccag
ttccaagaggatgcgtttggcagacaagcgaccagccctgttctcaccaaactgcctgca
caaagcttcctggacctgcgaccagcgggtggactctgccacattcttggcactgcctac
aagtttaaggcagagcaaggctggcgtaggtttgacttgcagaatccatcaagaactgaa
aggaatgttgagatgtttggtgccattggaatatcactgatccagaacaatggtatgtca
ctgcctgttgtatatgtggaccctacgctggaccaggagctggttagcagacttacagat
gtgatcgctaaacaccagggtacgctcactgaggaccgaacgctcgccagtcaccacatc
tacccctcacctgcttctaaagaggaagatgaatggatgcgtcctgtcatgaggaaagac
aaacatgttttggtacactggggcatgcaccctgacagttatgacagttggctgtcctca
agtgatgttgaaggagaggttgaagagccaccacattcagaaaagccgtggcgggtccat
gctggctgggttctggacacggatgttttcaacgagtggatgaacgaagaagactattgt
gtgaatgagaggaatgtagctatcattctgcgccggcgtattcacctcagagacgagcag
gactccaaacacaccccttcaaaaaagagaagacgctccatctctcctccctctgaaggc
aggaagaagggaaagaaggggcgaaggcgtggaccacaggaggaagagccagaagaagac
ttgaccaaagacatggaggaccctacccctgtccctaacatggaggaagttattttaccc
aagaatgtcaacctgaagaaggacagtgagaatattcctgtcaaaggagggaccatggct
gacctggatgaactggaggaggatttcccaggaagggaagatgaggagggaagaggggat
atacatcggctttcagaaggagaagacaacaccacagaacaaacacatcacatcataata
ccgagctacacgtcttggttcaataacaacagcgttcactcgatagagaaacgttcgttg
cctgaattcttccatggaaagaacaagtcaaaatcaccagaaatctacctggcataccgt
aacttcatgatcgacacttaccggctcaacccccaggaatacctcagctcaacgtcctgc
agacgcatcctcactggagacgtctgctctgtcataagggttcattcacttttggagcag
tggggtttgattaactaccaggtggatgcagagagcaaacccctgcccatgggaccccca
cccacccctcatttcaatgtattgattgacacaccgtccgggctggccccacttcaacac
aaacccctgcaggtgtcggcctcgcagaacatgttgtttttccaggaaaagagcagagag
aagccttcagaatgccagaactttggtctgcgctccgacatctacaccaagaaaatccct
aagactaaaggagtatcaggaagagaatggacggagcaagagacgctcttgctgttagag
gccttagaggtatacagagatgactggaacaaagtatctgagcatgtgggctccagaacg
caggatgagtgtattctccacttcctccgcctgccgatagaagacccttacttagaagac
tccgcggcttccctcggcccactggcgtaccagcccgtgcctttcagccaatcagaaaac
cctgtcatgagcaccgtggccttcctggcctctgtggtggaccctcgggtggcatcatct
gcagctaaggccgcactggaggagttttccaaagtgcacgaggagtcgctggataagatc
tctgaagcgtccaaccagcctgacaaaacagaatcaatggaagtagagaaaattgaaaca
aactccaccccccttcaggttcctttaaggacagatgggctcaaagtggaacccagtgtg
gccaatgtgacgggagaactagtcaaaagcgaaaatgctgaaaatatacttgcagaggag
ggagacggagtaagggtagatgatgacgagagctttgatcaggcagacgtggatgagggg
aggttgttggagcaggatctggtggatggcagcgttgtcacggcagcagctgctgctctt
tcctccgctgccacaaaggccaagcacctggcagcagtagaagagaggaagatcaagtcc
ctggtggctctgctggtggagacccagatgaagaagctggagatcaagctgagacacttt
gaggagctggagaccatcatggaccgagagaaagaggctctggagcagcagcggcagcag
ctcctctctgagagacagactttccacaccgagcagctcaaacaggcagagatcaaggtt
cgccagcagagggagcagcaggcgcagccgggatacaccgggcagccaacagctgtgcct
cctgcttcagctcagcccatgcccaacaggatgattcctggtggagtaaacgcccagaca
atggctcctcgacatcctggagctcccaatggcatgtacccgtcctctcagcctgatggg
atagcaccagctcagccgggccctccagcagccagtcacaactga
DBGET
integrated database retrieval system
