Gymnodraco acuticeps: 117562916
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Entry
117562916 CDS
T09661
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03250
Viral life cycle - HIV-1
gacu03272
Virion - Hepatitis viruses
gacu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117562916 (pdcd6ip)
03272 Virion - Hepatitis viruses
117562916 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117562916 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gacu04131
]
117562916 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gacu04147
]
117562916 (pdcd6ip)
Membrane trafficking [BR:
gacu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
117562916 (pdcd6ip)
Exosome [BR:
gacu04147
]
Exosomal proteins
Proteins found in most exosomes
117562916 (pdcd6ip)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
RPT
COG3_N
Motif
Other DBs
NCBI-GeneID:
117562916
NCBI-ProteinID:
XP_034096828
UniProt:
A0A6P8WCE9
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MATFISVPLKKSSEVELVKPLSKFVTATYPAGEEQAEYLRSVEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCSVEPKFPFSENQLCLTFTWKDAFDKGSLFSGSVKLALASIGYEKT
CVLFNAAALASQIASEQNLDNDEGLKTAAKFYQLASGAFGHIRDTVLSALNREPTMDISP
ETVGTLSNIMLAQAQEVFFLKAASDKMKDAVIAKLANQAADYYGDAFKQCQYKDNLPKYF
YFQEVLPVLAAKHCIMQANAELHQSILAKQKKRFGEEIARLQHAAELVKTVATSHDEYVS
VKDLTEKINRALTAAKKDNDFIYHDRVPEVKDLEHIGKAALVKPTAITPPLSQKFADLFE
KMVPMAVQQSMSIYGQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARAVVQLGGLQSIEQLIRDLPELLTRNREILDEALKMLNDEETTDNELRSKFNQRW
NRTPSGDLYKPLRAEGSNFSNILDKAVQADQVVRDRYNAHCDMITLLCKPENELNAAIPS
ANPTKTLQGSEVVNVLRSQLAQLDEMKRERETLEGEIKAVTFDMSTVFLTSLAQDGAISE
EQMSLSKLDQLYGAYNQRVQATLRTQEELLGQVQTSHQEFSSLKQSNTEANQREEVLKKL
ASAHDSYVEISNNLREGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFNVPAYQSAPAAPAGGPTPAPRTVFTGQPQQAQQQPPQMKPNPPARPPPPSFNPQ
AASPNPATTPTGPPNSNPQPLAPPSQAQGPPYPSYPGYYQMPMGYNPYAYGQYNMPNMPN
MPYMPYQQTPGQGGYPAAPPGGQPYPGYPQQPQQPPQQQPYYPQQ
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttatttcagtcccgttaaaaaagtcctctgaggtggagctggtgaaacct
ctgtcgaagtttgtcacagccacatatccagctggcgaggagcaggcggagtatctgcgc
tccgtggaggagttgaacaagctccgcaagagcgccctgggaaggccgctggacaaacat
gagagctccctggagatcctgctcagatactatgaccaactgtgttctgtcgagcccaag
tttcccttctctgaaaaccagctctgcttaaccttcacatggaaggatgcctttgataaa
ggatcgctgttcagtggctcagtcaagctcgcgttggccagtattggctatgagaagacg
tgtgtgttgttcaacgccgcagcgctggccagtcagatcgcctcagagcagaacctggac
aacgacgaggggctgaagactgccgccaaattctatcagctggccagcggagcgttcggt
cacatcagggacacggtgctgtccgctctcaacagggagcccaccatggacatctccccc
gagaccgtgggcaccctgagcaacatcatgctggcccaggcccaggaggtcttcttcctc
aaagcagcttcagataagatgaaagatgctgtcatcgcaaagttggccaatcaggctgca
gattactacggcgacgccttcaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgccggtgctggcggccaagcactgcatcatgcaggcaaacgct
gagctgcaccagagcatcctggccaagcagaagaaacgctttggagaggagatcgcccgc
ctgcagcacgcagcagagctggtgaagacggtggcaacaagtcacgatgaatacgtcagc
gttaaggacctgacagaaaaaatcaatagagcgctcaccgcagcaaagaaagacaatgat
tttatttaccacgaccgcgtgcctgaggtcaaggatctggaacacatcggcaaggcagcg
ctggtcaaacccaccgccatcacaccgccactcagccagaaattcgcagacctgtttgag
aagatggttcccatggcggtgcagcagtctatgagcatttacggccagaggaaggctgag
actgtgaacagactggtgggcacgatgagggaggccaccaacctctgcaacggtgtgttg
gcgtccttaaacctgcccgctgctctggaggacctttcaggagactccatcccacaatcc
attgctgagaaggcccgagccgtggtgcagctgggaggactgcagagcatcgagcagctg
atccgagatctacctgagctcctgacccgcaacagagagatcctggacgaggctctgaag
atgctgaacgatgaagaaacaacagacaacgagctgaggagcaagttcaaccagcgctgg
aacagaaccccctctggagacctctacaagcccctgcgtgcagagggatctaacttcagc
aacatcttggacaaggctgtccaggcggaccaggtggtgagggaccgctacaacgcccac
tgtgacatgatcaccctgctgtgtaaaccagagaacgagctcaacgctgccatcccgtcc
gccaaccccaccaagacactgcagggcagcgaggttgtgaacgtgctgcgctcccagctc
gcccagctggacgagatgaagcgggagagggagaccctggagggagagatcaaggctgtt
acctttgacatgtccaccgtcttcctaacttcgctcgcccaggacggggccatcagcgag
gagcagatgtcactctccaagctcgaccagttgtacggcgcctacaaccagagggtgcag
gccacgctccgcacacaggaagagctgctgggacaagttcagacgtcccaccaggagttc
agcagtctgaagcagtccaacacagaggccaaccagagggaggaggtcctgaagaagctg
gcttcagcccatgacagctacgttgagatcagcaacaacctgcgcgaaggcaccaagttc
tacaacgacttgacagaaatcctgcttaagttccagaataaatgcagtgacatcgttttc
gctcgcaagacagagcgggatgaactacttaaggacctgcagcagagcatcgcccgagag
cccagcgctccatccttcaacgtcccggcctatcagagcgccccagcagcccccgctgga
ggcccgacccctgcaccgagaaccgtctttaccggacagcctcagcaggcccagcagcag
cccccccagatgaagcccaatcccccagccaggcctcctccaccgagcttcaaccctcag
gcagcctcccccaatcccgccacaacccccactggccctcccaacagcaacccacaacct
ttggcccccccatcccaggcccagggacccccttaccccagctacccagggtactatcag
atgcctatgggctacaatccatacgcttatggccagtacaacatgcccaacatgcccaac
atgccgtacatgccgtaccagcagactccaggacagggaggctacccagcagcccctcct
ggcggacagccctaccctggctacccccagcaaccccagcaaccccctcaacagcagccc
tactaccctcagcaataa
DBGET
integrated database retrieval system
