Granulicatella adiacens: K8O88_01510
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Entry
K8O88_01510 CDS
T07507
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
gad
Granulicatella adiacens
Pathway
gad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8O88_01510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gad03019
]
K8O88_01510
Messenger RNA biogenesis [BR:
gad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K8O88_01510
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
ODP
Motif
Other DBs
NCBI-ProteinID:
UAK94011
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All DBs
Position
complement(333044..334717)
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AA seq
557 aa
AA seq
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MSSIKIIALGGVRENGKSLYAVEVEEDIFVLDCGLVYPEDELLGIDVVIPDFSYLEENKE
RIAGVFLTHGHADAVGALPYFLQNIDAPVFGSKLTIALAKYYVESSKLVKGFNDYHEVTE
NTEIDFASATIKFFKTTHTIPDSLAIVIKTSEGNIVYTGDFKFDQSASVEYQTNFGRITD
VGEDYVLALLSDSSDAESPVENVSDRKIAEAMLETFLNAQGRIVVACVASNILRIQQVIN
AAYESGRKIFLTGSELEEIVNIALSLNKLTVPDKELIITFNQMKKLPDNELVILETGNAG
EPIKALQKMALGRHRQVNLHEGDLVYIATTPSVAMETQIARTKDLIYRADAEVFEMANSK
KASGHATPNDLKLMINLLQPTFFIPVQGEYRSLLAHAELANELGIPYKNIFIPGKGDVVE
IENGQMNASGQVAAGNVLVDGIGVGDIGNIVLKDRKILSEDGVFVAVVTISRRLGKILSG
PQIISRGFVYMKTSEELLTEAQKIVTDVVEENLASEDFEWPRLKQEVRDALSRYLFDKTK
RRPVILPMIMEASNYKK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaaaatcatcgcactaggtggcgtgagagaaaacggtaaaagtctatat
gccgttgaagttgaagaagacatcttcgtgctagattgcggtttagtttatccggaagat
gaattactagggattgatgttgtcatcccagacttcagttatttagaagaaaacaaagag
agaattgcaggggtgtttttaacgcacggacatgccgatgcggtaggggcattaccttat
ttcttacaaaatattgatgcacccgtttttggttcaaaattaacgattgcattagcgaaa
tactatgttgaatcttcgaaattagtgaaaggatttaatgactaccacgaagttactgaa
aatacagaaattgactttgcaagtgctacgattaaattctttaaaacaacccatacgatt
ccagattcattggcgattgtgattaaaacgagcgaaggaaatatcgtatatacaggggac
ttcaaattcgatcaaagtgcttcagtggaatatcaaacgaattttggacgtattacagat
gttggggaagactatgttcttgctctattaagcgattcaagtgatgcggaaagtcctgtt
gaaaatgtcagtgaccgtaaaattgctgaagcgatgttagaaactttcctaaatgcgcaa
ggtcgtattgtggtagcttgtgtagcaagtaatattttacggattcaacaagtcatcaat
gcagcatatgaatctggacgcaaaattttcctaacaggttcagaactggaagaaattgtt
aatatcgcattgagtctgaataaattaacagttcctgataaagaattgattattactttc
aatcaaatgaaaaaattaccagataatgaacttgtcattttagaaactggaaatgctgga
gagccaattaaagctcttcaaaaaatggcattaggacgtcatcgtcaggtaaacttgcat
gaaggagatttagtgtatattgcaacgactccttcagttgcgatggaaactcaaattgct
cgtacgaaggatttaatctatcgtgcagatgcggaagtgtttgaaatggcaaacagtaaa
aaagcaagtggccatgcaactcctaatgatttgaaattaatgattaacttgttgcaacca
accttcttcattccggttcaaggggagtatcgtagtttattagcgcatgcggaattagcg
aatgaattaggaattccatataagaacatcttcattcctggaaaaggggatgtcgtagaa
attgaaaatggccaaatgaatgcttctggtcaagtagcagcaggaaatgtattggtcgac
ggaatcggcgtgggcgatattggaaatatcgttctaaaagatcgtaaaattctatcagaa
gacggtgtttttgttgccgttgtgacgatttctagaagactaggtaagattttgagtggc
cctcaaattatttcacgtggattcgtatatatgaaaacaagtgaggaattactaacggaa
gctcaaaaaattgtaacagatgttgttgaagaaaacttggcaagtgaagatttcgaatgg
ccaagattaaaacaagaggttcgtgatgctcttagccgttatctattcgataaaacgaaa
cgtcgtccagtcattttaccaatgattatggaagcctctaattataaaaaataa
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