Granulicatella adiacens: K8O88_02410
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Entry
K8O88_02410 CDS
T07507
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gad
Granulicatella adiacens
Pathway
gad03030
DNA replication
gad03430
Mismatch repair
gad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8O88_02410 (holB)
03430 Mismatch repair
K8O88_02410 (holB)
03440 Homologous recombination
K8O88_02410 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gad03032
]
K8O88_02410 (holB)
03400 DNA repair and recombination proteins [BR:
gad03400
]
K8O88_02410 (holB)
Enzymes [BR:
gad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8O88_02410 (holB)
DNA replication proteins [BR:
gad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8O88_02410 (holB)
DNA repair and recombination proteins [BR:
gad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8O88_02410 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DUF2284
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UAK94153
LinkDB
All DBs
Position
complement(508898..509857)
Genome browser
AA seq
319 aa
AA seq
DB search
MKKKQEAFIRTIDNLQFSHAYLFEGAKGIGKAEMAKEIAKILNCTNRSVGEGACQVCEHC
LRIEHGNFPDYIVVEPEGTTIKVNQIRALKSQLTKTAMESSAIICVIHAVDTLTPGAANS
LLKFLEEPTGNIHFILLTEQLSKVLITIQSRCQIIRFQSNQEDTVNGLLKEKGASNVTAQ
LVSQLTNSADQALLLLESESFGQIRQESWNWFVRIFTNRAMAFITIQSQVLPLLVSKVES
EQFLTLLQLYIRDALLCAQGLEGQLIQSDKIATVKTIAGKLSVKQWIQEHEKMTKALSKI
QSNVGVQAVLEQWVLQIPK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaagcaagaagcatttattcgtaccattgataatttgcaattcagccatgcc
tatttgttcgaaggagcaaaagggattggaaaagcagaaatggcgaaagaaattgctaaa
atactaaactgtacgaatcgaagcgttggagaaggtgcttgtcaggtttgcgaacattgt
ctgcgaattgagcatggaaactttcccgattatatcgttgtggagccagaaggaacgacg
attaaagtaaatcaaatccgtgccttaaagtcacaattaaccaaaacagcaatggaatcg
agtgcaattatttgtgtgattcatgcggtagatacattgactccaggtgctgccaatagt
ttactaaaatttttagaagaaccgacaggaaacattcactttattttattgacggagcaa
ttgagcaaagtgctcattaccattcaatctcgttgtcaaattatcaggtttcaatcgaat
caagaggacacagtgaatggccttttaaaggaaaaaggggcctctaatgtgaccgctcaa
ttagtatcacagttaactaatagtgccgatcaagccctattattacttgaaagtgaaagc
tttggacaaatccgtcaagaaagttggaattggtttgttcgtatctttacgaatcgagcg
atggcttttattacgattcaatcacaagttcttccgctgttagtttctaaagtggaaagt
gagcaatttttaacgttattgcaactctatatacgtgatgcacttctttgtgcgcaaggg
ctagaagggcaactgattcaaagtgataagatagcaaccgtaaaaaccattgctggaaaa
ctgagtgtgaagcaatggattcaagaacatgaaaaaatgacaaaggctctctccaaaata
caatcaaatgtaggagttcaggccgtattagaacaatgggttttacaaatcccaaaatga
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