Granulicatella adiacens: K8O88_03820
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Entry
K8O88_03820 CDS
T07507
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gad
Granulicatella adiacens
Pathway
gad03420
Nucleotide excision repair
gad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8O88_03820 (pcrA)
03430 Mismatch repair
K8O88_03820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gad03400
]
K8O88_03820 (pcrA)
Enzymes [BR:
gad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8O88_03820 (pcrA)
DNA repair and recombination proteins [BR:
gad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8O88_03820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K8O88_03820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF4494
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UAK94415
LinkDB
All DBs
Position
complement(784041..786362)
Genome browser
AA seq
773 aa
AA seq
DB search
MKNSNELIKGMNPRQKEAVMHTQGPLLVMAGAGSGKTRVLTHRMAYILAEEEVQPWNILA
ITFTNKAASEMKERVSALVGEQAGDMWVSTFHSMCVRILRRDCERIGLAKSFTIIDSGDQ
LSAMKRIMQKLNIDSDKFDARGILASISNAKNNFEDAETFAKTHANFMDQITAKCYVEYE
AEKRKNMTVDFDDLIMLTVKLFKEHPDVLAYYQQKFHYIHVDEYQDTNHAQYLLVQLLAD
KFKNICVVGDADQSIYGWRGADMENILSFEHDYPQAKVVLLEQNYRSTKTILKAANQVIE
NNQNRKPKELWTENEAGDKITYYCAASGYEESRYVMRTIQKMVNFDGYDYSDFAVLYRSN
AQSRTLEEDLLKANMPFKMVGGQRFYERMEIKDLLAYLRLLVNPTDDFSFRRVVNAPKRG
IGGKSIEKLEDFAQMHGFSLLEASAETTLNGISGKAGKGLADFAKLISDLTKMQEFVSLT
DLIEEVMIKSGYIASLEQAHTMEADARIDNMREFLSVAKEFEEKRFDSEAEESALVQFLT
DLSLVTDMENEEETSASQITLMTLHAAKGLEFPVVFLVGMEDGIFPSARTLQEGDEEEER
RLAYVGITRAEKKLFMTRAYSRLLYGKTQHYRESRFMQEIDDKLLQKEGEMISDSYYSSS
FYSEKPSYNRGSSATGGRLFDRYRNTNAQKNEGYLHKKSHSSASIQRVEKQTPTSASSDG
WTVGMKVSHKKWGRGTVVRITGEGDRQELDVAFAGMGIKRLLASFAPIEKIEE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaattcaaacgaattaattaagggaatgaaccctcgccaaaaggaagcggttatg
catacacaaggtccgcttctcgtaatggcgggggctggaagcggaaagacgcgcgtgttg
acgcatcgaatggcttatatattagccgaggaagaagttcaaccgtggaatattctagcg
attacgtttacgaataaagcagccagcgagatgaaagagcgggtaagtgctctagtaggc
gagcaagcaggcgatatgtgggtatccacttttcactcgatgtgcgttcgcattttaaga
agagattgtgaacgcatcggtcttgcaaagtcgtttacaattattgattctggggatcaa
ctttctgcgatgaaacgcattatgcaaaagttgaatattgattcggataagtttgatgca
cgtggcatcttagcaagtattagtaatgcaaaaaataattttgaagatgcggaaaccttc
gcaaagacacatgcaaacttcatggaccaaataaccgcgaagtgctatgtcgaatacgaa
gcagaaaaacgcaaaaatatgaccgttgactttgatgatttaatcatgttaacggtgaaa
ttgtttaaagagcatccagatgtattagcgtattatcaacaaaaatttcattatatccat
gtggatgagtaccaagatacaaaccatgcacaatacttactggttcaattgctagcggat
aagttcaagaatatttgcgtggttggagatgccgatcaaagcatttacggttggcgtgga
gccgatatggagaatatcttgtcgtttgaacacgattatccacaggcgaaagtggtctta
ctagagcaaaactatcgttcaacgaagacgattttaaaagcagccaatcaagtgattgaa
aataatcaaaatcgtaaaccaaaagagctatggaccgaaaatgaagcaggagacaagatt
acctattattgtgcggcttccgggtatgaagagtctcgttatgtgatgagaaccattcaa
aagatggtgaattttgacggatacgattatagtgattttgcagttttataccgtagtaat
gcccaatcacggacccttgaagaagatttattaaaagcgaatatgcctttcaaaatggta
gggggtcaacgattctacgagcgtatggaaatcaaggatttactcgcctatttacgttta
ttagtgaacccgaccgatgactttagcttcagacgtgttgtgaatgcgccaaaacgcggt
attggtggaaagagtattgaaaaattagaagactttgctcaaatgcacggtttttctctt
ttagaagcttctgctgagacgactcttaacgggattagtgggaaagcaggaaaaggatta
gccgattttgcgaagctaatcagcgatttaacgaagatgcaagagttcgtttcgctaacc
gatttaatcgaagaagtcatgataaaatcaggctacattgcctctcttgaacaggcgcac
accatggaagcagatgcgcgaatcgataatatgcgggaattcttatccgtagctaaagag
ttcgaagaaaaacggttcgattctgaagcagaagaatcagctttagtccaattcttaacg
gatttatccttagtgacggatatggaaaatgaagaagaaacgagcgcttcacaaattaca
ttgatgaccttgcatgcggcaaaagggttagagttcccggtcgtgttccttgtagggatg
gaagacggaatttttccttctgcaagaaccttacaagaaggtgatgaagaagaggaacgt
cgattggcctatgtagggattacacgtgcagagaaaaagctctttatgacacgtgcgtat
tcaagactgctctacgggaaaacgcaacattaccgcgagtctcgttttatgcaagaaatt
gatgataaacttcttcaaaaagaaggagaaatgattagcgactcttattattcaagtagt
ttctactcagaaaaaccaagttataacagaggttcttctgcaacaggtgggcgactcttt
gatcgttaccgcaacacgaatgcgcaaaagaatgaggggtatttacataagaaatctcac
tcttctgcaagcattcagcgcgtagaaaaacaaacgccaacgtctgcttcaagcgatgga
tggacggttggtatgaaagtatcgcataaaaaatggggaagaggaaccgtagtccgtatt
accggtgaaggagatcgtcaagaacttgacgtggcttttgcagggatgggaatcaagcga
ctccttgcaagttttgccccaattgaaaaaatcgaagaatag
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