Granulicatella adiacens: K8O88_06730
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Entry
K8O88_06730 CDS
T07507
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gad
Granulicatella adiacens
Pathway
gad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8O88_06730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gad03019
]
K8O88_06730
03009 Ribosome biogenesis [BR:
gad03009
]
K8O88_06730
Enzymes [BR:
gad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K8O88_06730
Messenger RNA biogenesis [BR:
gad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K8O88_06730
Ribosome biogenesis [BR:
gad03009
]
Prokaryotic type
rRNA helicases
K8O88_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UAK93189
LinkDB
All DBs
Position
1356019..1357548
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AA seq
509 aa
AA seq
DB search
MKFNELGLDSALLESIEKMGFEEATPIQAQTIPKALQGLDVIGQAQTGTGKTAAFGLPML
QKIDPSKKGVQGLVIAPTRELAIQTQEELFRLGRDKKIRVQAVYGGADINRQIRQLKENP
QIVVGTPGRLLDHISRRTLKLGAVETLVLDEADEMLNMGFLEDIESIIKQVPENRQTLLF
SATMPDDIKRIGVQFMKDPEHVRIKSNEMTATLIDQYFVKCKDYEKFDIMTRLLDVQTPE
LTIVFGRTKRRVDELARGLEMRGYRAEGIHGDLSQQKRMSVLRDFKNNHLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQEGMSVTFVTPNEMDYLRVIEELTRK
RMTSLRPPTQTEALEGQTKTAIESIDEMMKTVEPRRFKEAVSYLLDEYEPEELAALLLKS
MIKDPTEIPVKITPERPLPSRKRGNSRGNYNRNDRKDNRGRNGKGSFKRKEDRRGRGLED
EYTRGYKGKDSRRRNNKKKSDKGFTIRQK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatgaattaggattggattctgccttactagaatctatcgaaaaaatgggg
tttgaagaagcaactcccattcaagcacaaaccattccaaaagcattgcaaggcttagat
gtgattgggcaagcgcaaacagggactggtaaaacagccgcatttggtttgccaatgctt
caaaaaatcgacccaagtaaaaaaggcgtacaaggacttgtcatcgcaccaactcgtgaa
cttgcgattcaaacacaagaagaattgttccgtctcggacgcgacaaaaaaattcgtgta
caagcggtttacggtggagcggacattaaccgtcaaattcgccaattaaaagagaatcca
caaatcgttgtgggaactccaggtcgtttattagaccacatttcacgccgtacattgaaa
ctaggggcagtggaaacacttgtcttagacgaagcggatgaaatgttaaacatgggattc
ttagaagatatcgaatcgattatcaaacaagttccagaaaaccgccaaacgcttttattc
tctgcaacaatgccagatgatattaaacgtatcggtgttcaatttatgaaagatccagag
catgttcgtatcaaatcaaatgagatgactgcgacattaatcgatcaatatttcgtaaaa
tgtaaagactacgagaaattcgatattatgacacgtttattagacgttcaaacgcctgaa
ttaactatcgtattcggacgtacaaaacgtcgtgtagatgaattagcacgcggacttgaa
atgcgtggctaccgtgcagaaggaatccacggggacttaagccaacaaaaacgtatgagc
gttcttcgtgacttcaagaacaaccatttagacatcttagtcgctacagacgttgcggca
cgtggactagatatctctggcgttacacacgtctataactacgatatcccacaagaccca
gaaagctatgtacaccgtatcggacgtacaggtcgtgcgggtcaagaaggaatgtctgta
acattcgtgacaccaaacgaaatggattacctacgtgtgattgaagaattaacacgcaaa
cgtatgacaagtcttcgtccaccaacgcaaacagaagccttggaaggacaaacaaaaaca
gccatcgagtctatcgacgaaatgatgaaaactgtggaaccaagacgtttcaaagaagcg
gtctcttacttattagacgagtacgaaccagaagaattggcagctctattacttaagagc
atgattaaagatccaactgaaattccagttaaaatcacgccagaacgtccattgccaagc
cgcaaacgtggcaacagccgtggaaactacaaccgtaatgaccgtaaagacaaccgcgga
cgtaacggaaaaggaagcttcaagcgtaaagaagatcgtcgtggccgtggcttagaagac
gaatatacacgcggatataaagggaaagattctcgccgccgtaacaacaaaaagaaatct
gacaaaggatttaccatccgtcagaaataa
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