Gigantopelta aegis (peltospirid snail): 121368002
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Entry
121368002 CDS
T07458
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121368002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121368002
Enzymes [BR:
gae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121368002
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121368002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
DUF3657
Luciferase_3H
Phage_30_8
Motif
Other DBs
NCBI-GeneID:
121368002
NCBI-ProteinID:
XP_041348431
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All DBs
Position
3:complement(38032892..38068916)
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AA seq
540 aa
AA seq
DB search
MCEVIKSNFESYLPSITDVVKKAEFVAIDTEFTGLQLNEQNKPSLFDGSEERYRKLKNCV
SQFLVCQIGISAFVKEADNKYLAYTFNFPLFPTSFGPVDVRFQCQASSLKFLCQFKFDFQ
KFIYEGVSYMNESQEHIVREHMSSNAMFLGLERDADEHYLQKICSQVAEWFVSSKMGDTL
TVHCDKGCQTGDDYVVHSEIRNRFPSVWTVTDPFGKIVVERISAEKRKTMEEESRESQRQ
QEEQLINTMLGFTRVFRLLIELKKILVGHNMLMDLMFMHEKFFKPLPEKYCDFKRNIHEM
FPIVFDTKHFCTQLKKPFEQSKLLESTSLGDLYLALDSSKGKLHILCQPDIIHAPGFQRY
NGVHSPHEAGYDAYQCGYVFLRIAHMVTFKDTKSMNVTPCSFDVYLKNTTKFQNSVNIIR
AMINYINLDKEDPPSKRPQLLFVTTRKYGQSLKTEQLGCWFSKYGTVDIRLQGRQKALVA
TGNFSCAKDILRSFRHHEVIRVTYYNIWKHSTLIRGLMWTGVAASGGLCLWVLLSSSKNS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagtcattaaatctaactttgaaagttatttgccatcaatcacagatgttgtc
aagaaagctgaatttgttgctattgacactgaatttactggtctgcagttaaatgaacaa
aataagcccagtttgtttgatggaagtgaggagcggtataggaaactgaagaactgtgtt
tcacaattccttgtttgccaaataggtatttctgcttttgtgaaagaagctgataacaag
tatttggcatacacattcaacttcccattgtttcctacatcatttggtcctgtggatgtc
aggtttcaatgtcaggcatcaagccttaaatttttgtgtcagttcaaatttgattttcaa
aagtttatttatgagggtgtttcatacatgaatgaatcacaggaacatattgttcgagag
catatgagttccaatgccatgtttcttggacttgaaagggatgcagatgaacattatctg
caaaaaatatgttctcaggttgcagaatggtttgtgtcaagcaaaatgggcgacactttg
actgttcactgtgataaaggatgtcagactggtgatgactatgttgtgcactcagagatc
agaaatcggtttccttcagtttggacggtcactgatccatttggaaagattgttgttgaa
cgaatcagtgctgagaaacgcaaaacgatggaagaggaaagtcgagaatctcagcgacaa
caagaggaacagttaatcaacaccatgttaggttttactcgagtcttccggcttcttata
gaacttaagaagattcttgtaggtcacaacatgttgatggatcttatgtttatgcacgaa
aagtttttcaagccattgccagaaaagtattgtgatttcaagaggaatatacatgaaatg
tttccaatagtatttgacacaaagcacttctgcactcagttgaaaaagccatttgaacag
agcaaactcctggaatcgacatccctgggtgatttatatcttgcactggacagttccaaa
ggcaaactgcatattttgtgtcagccagacatcatccacgctcctggtttccaaagatac
aatggcgtgcactcaccccatgaagctggatatgatgcctatcaatgtggatatgttttc
cttcggattgctcatatggttacatttaaggacacaaaatctatgaatgtcactccctgc
tcatttgatgtgtacctgaagaacactacaaagtttcaaaatagtgtgaacatcataagg
gccatgatcaactacattaatttagataaagaagatccacctagtaaaaggccgcagctt
ctgtttgtgacaacccgcaagtacggtcagtctctcaaaacagaacagctaggttgctgg
ttctccaaatatgggactgttgacattcgtcttcaaggcagacagaaagcactggttgcc
actggcaatttttcttgtgcgaaggacattttgagatctttccggcatcatgaagtaatc
cgagtgacctattataatatctggaaacactctaccttaatccgtggccttatgtggaca
ggagtagctgcgtctggtggtctctgtctgtgggtgttgctgtccagcagcaaaaacagt
tga
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