Gigantopelta aegis (peltospirid snail): 121369086
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Entry
121369086 CDS
T07458
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gae03016
]
121369086
Enzymes [BR:
gae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
121369086
Transfer RNA biogenesis [BR:
gae03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
121369086
Prokaryotic type
tRNA splicing ligases
121369086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
121369086
NCBI-ProteinID:
XP_041349865
LinkDB
All DBs
Position
3:complement(75343862..75379217)
Genome browser
AA seq
504 aa
AA seq
DB search
MRTYKEELSYLNKITPNCWQIKKGFVDNMKVEGRFYVNDALEKLMFDELKQSVNNKGFGG
FLPGIKQIANVASLPGIVGNSVGLPDVHSGYGFAIGNMAAFDMSNPKAVVSPGGVGFDIN
CGVRLLRTNLHKDDVLPLKEQLAQCLFDHIPVGVGSRGIIPMNAQNLEEALEMGMDWSLR
EGYAWAEDKEHCEEYGRMLQADPSKVSNRAKKRGLPQLGTLGAGNHYAEIQVVEEIYDNY
AAKKMGIEFKDQICVMIHSGSRGMGHQVATDALVAMEKAMKRDQIDVNDRQLACAHINSQ
EGQDYLKGMASAANYAWVNRTSMTFLARQAFAKIFQTTPDDLDMHVIYDVSHNIAKVEEH
FLDGKQKTLLLHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMIE
TFGTTCHGAGRALSRAKSRRKLDYMDVLHALEEKGISIRVASPKLVMEEAPESYKNVTDV
VNTCHAAGISKKAIKLRPIAVIKG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgtacaaagaagagttgtcttacttgaacaagatcacacccaactgttggcag
atcaagaaaggttttgttgataatatgaaagttgaaggtcgtttctatgtgaacgatgcg
ttggagaagttgatgtttgacgaactcaagcagtcggttaataacaagggttttggagga
ttcctgccaggaataaaacagattgccaatgttgcctccctgcctggaattgttggaaat
tctgttggtctaccagatgttcactcaggttacgggtttgccataggaaatatggctgct
tttgacatgagtaacccaaaggctgtggtttcaccaggtggtgtcgggtttgacataaac
tgtggtgtgagacttttaaggacaaacctacacaaagacgatgtgttgccactaaaagaa
caactggcgcagtgcttgttcgaccacattcctgttggtgtcggctccaggggcatcata
cctatgaatgcacaaaatttagaagaagcattagagatgggtatggactggtccctaaga
gaaggttatgcatgggctgaagacaaggaacactgtgaagaatacggtcgtatgttacag
gctgacccctccaaggtcagcaatcgagcaaagaaacgaggactgccacagctgggaaca
ctgggtgctggaaaccactatgctgagattcaggttgttgaagaaatatatgacaattat
gctgccaagaagatgggaatagagttcaaagaccagatttgtgtcatgattcacagtgga
agccgggggatgggccatcaagttgccacagatgctctggtagcgatggagaaggctatg
aaacgagaccagattgacgtgaacgatcgacagctggcgtgtgcccacatcaattcccag
gaaggtcaagactacctgaagggaatggcgtctgccgctaactatgcttgggtgaacaga
accagcatgaccttcctagccagacaggcatttgcgaagattttccagacgacccctgac
gatcttgacatgcatgtcatctacgacgtttcacacaacatcgccaaagtggaggagcat
ttcctagacggcaagcagaaaacactgcttctacacagaaagggatcgacccgtgcattc
ccacctcatcacccacttataccggtcgactatcagttaacaggccagcctgtcctgatt
ggtggaacaatgggaacatgcagttatgttctcacaggaacagaacaaggcatgatagaa
acattcggaacaacatgtcatggagctgggagagcactctccagagcgaagtcccgtcgt
aagttagactacatggacgtgctgcatgcattggaagagaagggaatcagtatacgagtg
gcatcaccaaaactggttatggaggaagcaccagaatcttacaagaatgtcactgatgtt
gtaaatacatgtcacgctgctggaatcagtaaaaaggctatcaagttacgacccattgca
gtcatcaaaggctga
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