Gigantopelta aegis (peltospirid snail): 121372473
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Entry
121372473 CDS
T07458
Name
(RefSeq) protein PAT1 homolog 1-like isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121372473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121372473
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121372473
mRNA degradation factors
5'-3' decay
Decapping complex
121372473
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
PhaP_Bmeg
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
121372473
NCBI-ProteinID:
XP_041354729
LinkDB
All DBs
Position
4:complement(2258372..2305066)
Genome browser
AA seq
862 aa
AA seq
DB search
MDESRVSGGSGLSALGAGKLNPLDNELIEAPEDEEDFDILNDETFGDIPVEPFDWHEQHE
RFAEELSGSGSFYESRQNGHAANRTCDSGFGTTEKNYISQEEFLEQSISQLVVDDDESCP
VSSDPAIVNISTSRDIPLPYKKEAHLENLFGPASPPSFLDTEHLLSPTSRDIWGSPAGDS
SFPKPVDNLQALFNFAKVANNDVQISTSSPAVTKSKSAVPQSPSIPAYAQTLAEIENQLL
KKKPVKVMTAENLERELRGETASPTKHEEISIRQPGPFQLQQQNRLPFSMPVPIPPIGRT
VMQNIPQSNIGFSPISHYPDGRNSPLQFGSSPLRNRVSPIPTLTRQSPVFIGIQSPLARS
FTPPLPVHRPPSPVQARFMSPYNQTYIIGNATSPQNVFNNAVRIPQSSRGPGMPFVHMGS
PHGPRITRPMVMSDPGFGRGYLSNRGRHFSNNQHFEGSPVLYHDRPSHNTRFVKDNRPMQ
VRDNHRTVDEYDGLMTQKEKDWIVKIQLMQLQTDNPYLDDYYYTCYTLKKKAIERQKLRE
SSGDGDNKNDPKLVIPNLAKMESRAYMPAQFEGSLGRLTTASVHNPRQIIDLARNISQAG
EESKNVSKELRRFRQLLMDIEKGFNILLDIDDLEKKVLALPEDSRIPLLEERQDKINLLY
SSLSMQDYIETFIQIMSVRKGRKLLSRVLPYLSKAQAAILVSLILCNLGQLMKKDQKDEG
MVMLTDAICQAIGNTDLDQLVELTQQISEDKIQEKISALMQNKFGSSLLCSMLRQGENIL
KNTSPVDLDNQMQTAWSHFVEEFVEALTTIPKESIVSPNKPHQSIMDHLDRQLNKELIAD
IEDKISVLTSIPGTNRHNSESK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcgcgtgtttctggtggttctgggttgtctgcactaggtgcaggtaaactg
aacccactggacaatgagctgattgaggctcccgaggatgaggaagacttcgatattttg
aatgacgagacgtttggagatatacctgtagaaccgtttgactggcatgagcagcatgag
cggtttgcggaggagttaagtggcagtggttcgttttatgagagtcggcagaatggacac
gctgcaaacaggacgtgtgactccggctttggcaccacggaaaaaaattacatatcacaa
gaggaatttctggaacagagtatcagtcagttggttgtcgatgacgacgagagctgtccc
gtcagcagtgaccctgccattgtcaacatttcaaccagccgggacatcccattaccatac
aagaaagaagctcaccttgagaatctgtttggtccagcctccccaccatctttcttggac
acagaacacttgctttctccgacaagcagagacatctggggttcaccagctggtgactca
tcgttcccgaaacctgttgacaatctgcaggcactgttcaacttcgcaaaagtagccaac
aatgatgttcagatcagtaccagtagtcctgctgttaccaaatccaagtcggcagtgccc
cagtcaccatctataccagcctatgcacagacactggcagaaatagaaaaccagctcctg
aagaagaaaccagtgaaagtaatgacggccgaaaacttggagcgagaactgcggggtgag
accgcttcgccaacaaaacacgaggagatctctatccgccagccgggcccgttccagctc
cagcaacagaacaggttgcctttctctatgccagtacccattcctccaattggacgaacc
gttatgcagaatataccacagtctaacattggcttcagtcctatttctcattaccccgat
ggacggaattcccctctccagtttggcagttctccgttacggaacagagtgtcacctata
ccaacattaactcgccagtcaccagtcttcattggtattcagtcgccactggctagatca
ttcacaccaccccttccagttcaccgacccccttctcctgttcaagcacgttttatgtcc
ccttacaatcagacatacatcataggaaatgctacctccccacagaatgtattcaacaat
gcagtccgcattccccagtcaagtcgtggcccgggtatgccatttgttcacatgggtagt
ccacacggtccgagaataactcgtccgatggtgatgagtgatccgggatttggacgagga
tacctgtcaaacagaggtcgtcatttctccaacaaccaacattttgagggttctcctgtg
ttatatcatgacagaccatctcacaacactcgcttcgtgaaagacaaccgaccgatgcag
gtgcgtgataaccaccggactgtggacgaatacgacgggctgatgacgcagaaagagaag
gactggattgtgaagattcaactcatgcagctacagacggataatccatacctagacgac
tactactacacgtgctacacgttaaaaaagaaggccatagaacggcagaaactccgagag
agtagtggagatggagacaataaaaacgatcccaaacttgtgatacctaacttagcaaaa
atggaatccagggcttacatgccagcccagtttgaaggatctctcggcaggttgaccacg
gctagtgttcacaatcccaggcagatcatcgatctcgcgcggaacatcagccaggctggg
gaagagtcgaagaacgtgagcaaggaattacgtcgcttcaggcagttactgatggatatc
gagaagggctttaatattcttctggacatcgatgacctggagaaaaaagtgctagctctc
ccggaggacagcaggattccactgttagaggaaaggcaggacaagatcaacctactctat
tcatctctgtctatgcaggattacattgaaacatttattcaaatcatgtctgtcagaaag
gggaggaaactcttgtccagagtgctgccctatttgagcaaggcccaagctgctatacta
gtctcattgatactgtgtaatctcggacagctcatgaagaaagaccaaaaggatgagggc
atggtgatgttgactgatgccatctgccaggctatcggaaacactgatctcgaccagctt
gtggagctcactcagcagatcagcgaggacaagattcaggagaaaatctctgcccttatg
cagaacaagttcggctcaagcctcttgtgcagtatgttacggcagggggagaacattctg
aagaacacgtcaccagtcgacttggacaaccagatgcagactgcttggagtcattttgtg
gaagaatttgtcgaagccttgactaccatcccaaaggaatctatagtgtctccgaacaaa
cctcatcaaagtataatggaccatcttgaccgccagctgaacaaagagctcattgctgac
atagaggacaaaatcagtgtactcacttcaataccggggacaaaccgtcacaacagcgaa
agcaaataa
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