Gigantopelta aegis (peltospirid snail): 121374238
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Entry
121374238 CDS
T07458
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03013
Nucleocytoplasmic transport
gae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121374238
09122 Translation
03013 Nucleocytoplasmic transport
121374238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121374238
03041 Spliceosome [BR:
gae03041
]
121374238
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121374238
Spliceosome [BR:
gae03041
]
Complex C
Other components
EJC/TREX
121374238
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121374238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
121374238
NCBI-ProteinID:
XP_041357182
LinkDB
All DBs
Position
6:complement(20373714..20446742)
Genome browser
AA seq
1636 aa
AA seq
DB search
MASSCLTPDACKSWEKSGKSDFVKQCRKLADGNGLWDPGSQTVKHAVYDLCWCVLKGQLK
QDLALGALADINDHLKDFHSLLADILGIIDVETSTTDDKMLREKFITLVGASTGIISEAI
LKERLDQESLEAAGLIPSKLQFQAKFVKTKTRLYYKQQKFNLLREESEGYSKLATELNQE
IAYNKLTYPQVLENIKSLIGCFDLDPNRVLDIILESFECHLEHESFYIPLLRAYVLDKQT
LCHVLGFRFHFYEPSQGSEIPSSLYKIAALLLKHKLVSLDDLYPHLLPNDADIVSYHNKE
VSDAKVYARKLNVVVLSDKKDEDKDKEDTMKIDLRANNQKIGLCEALLEIGSWENAKAIL
DRMPEFFAVSYNPIAKALCTFIHAAIEPLYHQNCGLSSYLRRRRSKYPRDKSGIETVKTF
QQLYQKVFPMLMYLGPHASIDPVLLVKFMRMGRAFMNKRHDGGIAPEDDVAYYGFLNVLD
DVLLPCQSLLRCNCCIAEELWNFLKHFPYELRYRMYGHWKNDAYGQHPVLIRRRADCLDR
AKYIMKRLSTETIKPSGRQIGKLTHSNPGVVFEYILTQIQRYDNFIGPVVDSLKFLGPMS
YDMLTYCIIEAVASPERERLKHDDTNISLWLQSLANFAGSICKKYQVELGGLLQYITNQL
KAGKSYDLLLLREIVQKMAGIEISEEITNDQLDAMNGGELLRQEGGYFAQVRNTKKSSTR
LKDTVLEHDLAVSLCLLMAQQRDSVIFQEDAERHLKLVGKLYDQCQDTLVQFGTFLSMQL
STEEFVKRLPSIDVLVSEYHVPADAAFFLARPFYVNAINTRYEELRRIDKNNKQASSSLK
TQRYIEAANEAMTPALDLVRPLYQDKIWDDISPLFYMTFWTLSMYDLYVPTAAYEKQISL
LQQQISHIEDNKDMQSKKKKEKERCTNLIEKLKDEEKKQNDHVNRVLGRLKHDQDKWILS
GSTKNETVTQLLQLCIFPRCCFTASDALFCAKFIHVLHDLKTPNFSTLICFDRIFCDITY
SVTSCTENEAHRYGRFLCASLGTVMKWHSDIDIYEKDCANFPGFVTVFRKKVDHTAKAPV
ENLDYENYRHVCHKWHFRITKAMVACLESGNYIQIRNALIVLTKILPHYPRITQFGQALE
RRVDRLSKEEKDKRPDIYAIAMGYAGQLKSKRMTWVPEHSFHIKEEKKGEAKVTNGPVQK
AEVKPSGSKEGVMKKLDTDTKGKEGKENKDSKEKKEKSVEKREKTAEKKEKKEAKEKKEK
KSGDHAKDGASSKTPREKSNDKEKVNKDKSSSEESKEKSSKDVHLGDGDKPDSTAVKENG
KSEGKSKKSDKKSKEEKIGKLKVKREKQDHSEERRAEKGKKSVSKEQEKLEERANAASRE
RAEERSSSSTVTSSSSLSAQRQSEDALQKYVDDRDPKRRKIDVTPSSGKESYIPEALPKH
HHIRRSPSTEREREREREWDRDRDWDRKERKRDHSLEKADIELKRRRSEEIFSMRSKQNG
DSDISSSKRRSHSKEKDWQMLSNKHASPTSRSGRYETSPVMRNRQDSPTRLVRIDSPPFR
SNKHSSPPMRSSRHISPPPRLSKHSSPPPPPRSVKHGSPSPRASGSKKDLGSSDESPVRK
PKVKKEKLSSSKKSKK
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcgtgccttactccggatgcctgcaaatcttgggaaaaatcagggaaatct
gattttgttaaacaatgcagaaaacttgctgatggcaatggattgtgggatcctggttcg
cagacagtcaaacatgctgtatatgatttgtgttggtgtgttcttaaaggacagctgaag
caagatttggctcttggtgcactagccgacatcaatgatcacttgaaagattttcactct
ctcctcgctgatatccttggaataattgatgtggagaccagtacaaccgacgacaagatg
ctgcgagaaaaatttataactcttgttggtgccagcaccgggattatttctgaagccatt
ctgaaggagcgcctcgaccaggaatccttggaagctgccggattgataccatcaaaattg
cagtttcaagctaaatttgtcaaaacaaaaacacgactgtactacaaacaacaaaagttc
aatttacttcgtgaagaaagtgagggatactccaaactagcgacagaattgaaccaagaa
atagcatacaacaaactcacttatcctcaagtccttgaaaacattaaatccttgattggt
tgctttgaccttgatccgaatcgtgttcttgacataatactggaatcctttgaatgtcat
ctggaacatgaatctttctacattccactgttacgtgcctatgttcttgacaaacaaaca
ttatgccatgttctcggattccgatttcatttttatgagccttcccaggggtcagagatt
ccatcatcactatacaaaatagcagctctgcttctgaaacacaaactagtcagccttgat
gatctgtatcctcatcttctgcctaatgatgcggacattgtctcatatcacaataaagag
gtttcagatgcaaaagtttatgccaggaaactgaatgttgtcgtcttatccgacaaaaaa
gatgaggataaggataaagaggatactatgaagattgatttgcgtgctaacaatcagaaa
attggattgtgtgaggctcttctggagatcggatcatgggagaatgcaaaagcaattctt
gatcggatgccagagttctttgcggtttcatacaacccgatagccaaggcactgtgtact
tttattcatgctgccattgagcctctctaccaccaaaattgtggattgtccagttatctc
aggcggaggaggtcaaaataccccagagataaatctggcattgagactgtcaagacattt
caacaactttaccagaaggtttttccaatgttgatgtatctgggaccacatgcgtccatt
gatccagtcttgctagtcaaatttatgagaatgggcagagcattcatgaacaaaagacat
gacggcggtatagcaccggaggacgatgttgcttactatggttttctgaacgtcctggac
gatgtgttgttgccatgccagtctctgttgcggtgtaattgctgcatagctgaagaactc
tggaattttctcaagcattttccttatgaacttaggtatcgaatgtacggtcactggaag
aacgatgcctatggccagcatccggttctcatcagacgacgagcagattgtctagaccgg
gctaagtacatcatgaagcgactttccacagaaaccataaagccatctggtcgtcaaatt
ggtaaactgactcacagcaatcctggagtggtttttgaatatatattgacccagattcag
cgttatgacaacttcattggaccagtggtggactctctcaagttcctcggcccaatgtcc
tatgacatgctgacatattgcatcatagaagctgtggctagcccagaaagagagagactg
aaacatgatgacacaaacatatcattgtggctccaaagtttggccaactttgcgggatct
atatgcaagaagtatcaagttgagctgggtggacttctgcaatacatcactaatcagctc
aaagcaggaaaaagttatgatctgttactgctgagagaaatagtgcagaaaatggcaggg
attgaaatctctgaagaaatcaccaatgaccagcttgatgccatgaatggtggggagcta
cttaggcaagagggaggatattttgctcaagtgcgaaacacgaagaagtcatcgacccgc
ctgaaggacactgttcttgaacacgacctggctgtgtcactgtgtctcttgatggcacag
caacgggattcagtgatattccaagaagacgctgaaagacacttaaaacttgttggaaaa
ctttatgatcagtgtcaggatactcttgttcagtttggaacgttcctgtcgatgcagctg
agtacagaagagtttgttaagagattaccatccattgatgtgctggtgtcggaataccac
gtcccagcagatgcagccttctttcttgccagaccattctacgtcaatgcaatcaatact
agatatgaagaactgagaaggattgacaaaaacaataaacaggcatccagctctctgaag
actcaacggtacattgaagcagccaatgaggcaatgactcctgctttggatcttgtgcga
ccactgtaccaagacaaaatatgggatgacatcagccctctgttctacatgacgttttgg
acactatccatgtacgatctttatgttccaactgctgcatatgagaaacaaatttctcta
ctgcaacaacagatcagccacattgaagacaataaggacatgcaaagcaagaagaagaaa
gagaaggagaggtgtacaaatttaatagaaaagttgaaggacgaggagaagaaacagaat
gatcatgtgaaccgagttctgggaaggctgaaacacgaccaggacaagtggattttgtct
gggtcgacaaagaacgagactgtgactcagttgcttcagctgtgtatatttccacggtgc
tgcttcacggccagtgatgctctgttctgtgccaagttcatccacgtgctgcacgacctc
aagacgcccaacttttccacacttatctgttttgacaggatattctgtgatattacctat
tctgtgactagctgtacagagaatgaagctcatcggtatgggcgatttctgtgtgcatcc
ctggggactgtgatgaaatggcacagtgacattgatatttatgaaaaggactgtgccaac
ttcccaggctttgtgacggtgttcagaaagaaagtggaccacactgcaaaggcccctgta
gaaaatctggactacgaaaactaccgtcacgtttgtcacaagtggcacttcagaattaca
aaggctatggttgcatgtttggaatcgggcaactacattcagattagaaatgcactgatt
gtcttgaccaagattttacctcattatccccgaatcacacagtttgggcaggctcttgag
agacgcgtggaccgactaagcaaagaggaaaaagacaagagacccgacatctatgccatt
gctatggggtatgctggacagttgaagagcaaaagaatgacttgggttccagaacattct
ttccacataaaagaagagaaaaagggtgaagctaaagttaccaatggaccagttcaaaag
gctgaagtaaagccatctggatccaaagaaggtgttatgaaaaagctagacactgacact
aaaggaaaagagggcaaagagaacaaagactcgaaggaaaagaaagagaagagtgttgag
aagagagagaagactgctgaaaagaaagaaaagaaagaagccaaggaaaagaaagaaaag
aagtctggtgatcatgcaaaggatggagctagcagcaaaactccaagagagaaaagtaat
gacaaggaaaaagtcaacaaagacaagagcagttccgaggaaagcaaagagaaatccagc
aaggatgttcatttgggtgatggggacaagcccgattcaactgcagtgaaggaaaacggc
aagagtgaggggaagagcaagaaaagtgataagaaatcgaaagaagagaaaataggaaag
ctgaaggtgaagcgagagaagcaggaccactctgaggagagacgggcggagaaagggaag
aaaagtgtgagcaaggagcaggagaagctggaggagagggcgaacgcggcgtcacgtgag
agagcggaggagaggtcgtcgtcgtcgacggtcacgtccagcagcagtctcagtgcacag
agacagagtgaggacgctctgcagaaatatgtagatgatagagatccaaaacgcaggaag
atagatgtaacaccatcaagtggtaaggaaagttatattccagaagcattgcccaaacat
catcatattagaaggagcccatcaactgagcgggaacgagagcgtgaaagggagtgggat
agagatcgagactgggatagaaaggaacggaaaagggatcattcacttgagaaagctgat
attgaattgaagagaagacgtagtgaggagatattttctatgcgttcaaagcagaatggc
gattcagacatatcctcctcaaaacggcggagtcacagcaaagaaaaagactggcagatg
cttagcaacaaacacgcgagtccaacatcgcgatcaggtcgatatgagacaagtcctgtg
atgaggaacagacaggacagcccaacgcgtctggtccggatcgatagtccgcccttcagg
tccaacaagcacagcagtcctcccatgagatccagcagacatatcagtccacccccgaga
ctgagcaaacacagcagtccaccgccaccaccacgatcggtcaaacacggaagtccgtca
cctcgagcaagtggcagtaaaaaggatttaggttcttctgacgaatctccagttagaaaa
ccaaaagtaaagaaagaaaaactatcatcatccaagaaatctaagaaatga
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