Gigantopelta aegis (peltospirid snail): 121378405
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Entry
121378405 CDS
T07458
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121378405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121378405
Enzymes [BR:
gae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121378405
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121378405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_1
RRM_Thc1
NCBP3
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
121378405
NCBI-ProteinID:
XP_041362494
LinkDB
All DBs
Position
8:25510173..25573049
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AA seq
613 aa
AA seq
DB search
MDVTKNNFAAVFSDITKAIEDADFLAIDGEFTGLDTPQVGHVTFYDTPEERYQKLRKGST
DFLLIQFGLAAFTYDDETKSHTAKLFNFYVFPRPYTRQAPDRRFLCQSSSIDFLASQGFD
FNKLFRDGIPYLTLADETQLRETIRSKHKDYSQFSSPAFMSPFGADPGPSKGPVCVPDEH
KEFIADVGNKVAKFLEQDAEDTLQLPPCGGFPRKLIYQTIRLKFSSSLHLETKSGEKKER
YIVITKIKGEDDMKAKEQAKQNAELNELDDAVGFCKVTRLLSQSGKLIVGHNMLLDVLHL
INQFCIHLPKEYEEFKSLTRCVFPRLLDTKLMASTNPLKNHIHNSTLGDLKKILEYSPFT
KPKVDLPEEFSRYSGNEHLHEAGYDAYITGLCFISMSNYLGSCQNPPKEYIPPKSQLIEP
FINKLFLMRVSDIPYINLSGADLQMSREHVFHITFPKEWKTSDIHELFSPYGNIQISWLD
DISAFVSLYKKDNAQAALKGLSAKNSVYRVVTYEAYKKEISPKRDVPVSRKRSSEDVDID
MANKKRKSLNVQAAPFVSRLKPAILEDKKQEKNGNNSSGRHSDKKAQGDANDDQGDNKME
TGEKLFDESENWD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcacgaaaaataactttgcagctgtgttcagtgatattacaaaagcaatagaa
gatgcagacttcttagccattgatggtgaatttacaggtctagatactccccaagttgga
catgttaccttctatgacacaccagaagaacgctaccagaaactgagaaagggttctaca
gattttcttctgattcagtttggattggctgcctttacatatgatgatgaaacaaaatct
cacacagctaaattatttaacttctacgttttcccgcgaccatacacaagacaagctcca
gatcgaaggtttttatgtcagagttccagtattgactttttggcctctcagggctttgac
ttcaacaagcttttcagagatggaataccatatttaacactggccgatgaaacccagctg
agggaaacaattcgaagcaaacacaaggactacagccagttttcatctcctgcattcatg
agcccatttggggctgacccaggccccagcaagggtccggtttgtgttccagatgagcat
aaagagtttattgcagacgttggtaacaaagttgctaagtttttggagcaggatgcagaa
gacacactacagctgccaccatgtggcgggttccccaggaagctcatctaccagaccatc
agactgaaattttcttcctccctccatttggagaccaagagtggagaaaagaaagaaaga
tatatagtcatcacaaagatcaaaggtgaagatgacatgaaagccaaggaacaggccaag
cagaatgctgagctgaatgaacttgatgatgctgttggtttctgcaaggtcacaaggctg
ttgtctcagtcgggcaagctcatcgtgggccacaacatgttgcttgatgtgctgcacctc
atcaatcagttctgcatccacttgcccaaggaatacgaagagtttaaatccctcacccgg
tgtgtctttccaaggttacttgatacgaagctgatggcaagcacaaacccattaaagaat
catattcataactcaacactgggtgacttgaagaagatcctggaatatagcccatttaca
aagcccaaggttgatctcccagaagagttttctcggtacagtggtaatgaacatctgcat
gaagcgggatacgatgcttatatcaccggtctctgtttcatctccatgtctaactactta
ggatcttgtcagaatccaccaaaggaatacattcctccaaaatctcagctgatcgagcct
ttcatcaacaaattgtttctgatgcgtgtttccgacattccctatataaatctgagtgga
gctgatttacaaatgagtcgagaacatgtgtttcacattacatttccaaaggagtggaag
acctcagacattcatgaattattttcaccttatggaaacatccagatctcctggttagat
gacatatctgcctttgtttccctctacaagaaggataatgctcaagccgccctgaaaggt
ttgtcagcaaagaattctgtttacagagtggtcacttacgaggcatacaagaaggagatc
tcaccgaaacgagacgtccctgtgagcaggaagcggtcatcggaagatgtcgacattgac
atggcgaacaagaagagaaagtccctgaatgttcaagctgccccatttgtttcaagatta
aaacctgcaatacttgaagacaaaaaacaagaaaagaatggaaacaacagttcaggtcgt
catagcgacaagaaggcacaaggtgatgcaaacgatgaccaaggagataataaaatggaa
actggggaaaaactctttgatgaatccgaaaactgggattga
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