Gigantopelta aegis (peltospirid snail): 121380557
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Entry
121380557 CDS
T07458
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit Pan2-like isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121380557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121380557
Enzymes [BR:
gae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121380557
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121380557
mRNA degradation factors
3'-5' decay
Pan complex
121380557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
Beta-prop_WDR36-Utp21_1st
UCH
WD40_CDC20-Fz
Beta-prop_THOC3
eIF2A
WD40_Prp19
EIF3I
Beta-prop_WDR3_1st
zf-CCCH_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR5
Beta-prop_WDR3_2nd
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
121380557
NCBI-ProteinID:
XP_041365357
LinkDB
All DBs
Position
9:10662841..10708294
Genome browser
AA seq
1262 aa
AA seq
DB search
MDYSRMGGGHGNYPPGAMHGDMLQHQQHGMMGDGFAQQQQHMGHMYGDGGGTDFSQHASV
LMDGGGHFGVSTLTFDTRQELVWVGNTGGHVTSYYGIDMQKYTSFQVHATNDIRQILPLD
SGILFLTKNSLRLSIRRGLSILNYQGQESMQDMQCMMMTGPSAVLMGGHQAKAVEFDLTK
GQEMNQFDIGEPGCAIFRQSARFICAGDTSGKVKLYDPNTMKAEHVLDAHSGTLSDFDVH
EHLLVTCGFSNRMGNLTADRFLMVYDMRVMRAVAPMQVHVDPMFIRFVPDYSNKLAIVSQ
TGHFQLVEAIAMPPPMVFYQVNTNGTAITGFDMSPSCQSMMFGDNHGMLHEFTLGDNCCF
NMYPEPTEFPDPVQPLPPIHIDDEMTPYSVIPMIYPTNGHLMSDWPVGMCKREYRKPKPI
DPQLLQSMKVYQNVGYVPNPGKGLRNQIAYRLPKEGQPSQTRKPSVPESPLGRGEDPFQS
IPKKYQKVEMKYSKLGLEDFDFRHYNKTNFAGLETNIPNAYCNAALQSLYFLEPLRCHLL
NHLCQREFCLSCELGFLFHMLDSQKGQTCQATNFLRAFRTIPEASALGLCLGEAEELAGK
VNLSRLIQSWQRFVHQQVHSETCVKIEPEVKDKPMEAVTEASGEKKNEPATNKTKKKKKK
GKKKESDAKDEQEQTESTEEDNSKSVEDDQAQPVRKEEKSMVTKLFAIRTNVVLRCRCGL
ESNRDNDMTLVNLTYPDCYPQGEEKNHSSLQPPAAFKFSQVIEHSLCSENTIKAWCNQCA
RYEQHIQKKVLNNLPDVLGFNCQLENETNLKFWKTQQEILKLMTEETVHISAVAQRRLAA
KSCRYGSSCKRKDCKFRHDPEHDSVLDELAEQQEDDETSPKWLPLGLKIKLLPNGTVDIT
EISDEEPLPKQDEENTVYYELYGTLAHIKDKGAGNLVSHLNVGEEFHQRKERVTCTQWYL
FNDFSITPIEKYEAVHFNLEWKVPCAVYYMRRYLTKSYDLTVKNPINPDIIYNDWGLLNP
KRRKITYQPLSLDELPQKGDIVGLDAEFVSLKQEESELRSDGTRSTIKPSHMAAARITCL
RGQGDKAGDPFIDDHISNQEQVVDYLTQYSGIKPGDLDPNVSTKHLTTLKCTYQKLRYMV
DIGICFVGHGLKKDFRVINILVPKAQVIDTVELFHLPRQRMISLRFLAWYFLKINIQSDT
HDSVEDARTALQLYKLYKDLKDEGGDKLQATIKEMYEFGRKCQWKIPNVEEEDMIDEQIS
FL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggattattcaaggatgggcggtggccacggtaactaccccccaggtgcgatgcatggg
gatatgttacagcaccagcagcatggaatgatgggagacgggttcgcacagcagcagcag
cacatgggacatatgtacggggacggtggcgggacagacttttcccagcatgccagtgtc
ctcatggacggaggggggcacttcggggtgtccaccctgacgttcgacactcgacaagaa
cttgtctgggttggaaatacagggggccatgttacgtcatactatggaatcgacatgcag
aagtacacatcgtttcaagtacatgctacaaatgacattcgtcagattcttccgctggac
agtgggattctattcctcaccaagaacagtctgaggttgtccatcaggagagggctgtcc
attctcaactatcaaggtcaggagagtatgcaggacatgcagtgtatgatgatgaccggt
ccaagtgccgtactcatgggaggtcaccaggccaaggccgttgaatttgacctcactaaa
ggtcaagaaatgaaccagtttgatattggtgagcctggctgtgctatttttcgacaatct
gcaaggttcatctgcgctggggatacaagtggaaaggtcaagttgtatgatccaaacaca
atgaaagcggaacatgttcttgatgcccactcaggcactctgtcagacttcgacgtccac
gaacatttacttgtcacgtgtggtttttcaaacaggatggggaacctgacggccgaccgg
tttctcatggtgtacgacatgcgagtcatgcgtgcagtggctcccatgcaggttcacgtc
gaccccatgtttatacggtttgtccctgactacagcaacaagctggccattgtgtcacag
actggacacttccagctggtggaggcgattgcgatgccgcccccgatggtcttctatcag
gtgaacacaaacggcacagccatcaccggcttcgatatgtcgccgtcatgtcagtcgatg
atgtttggagacaaccacggaatgctgcatgagttcacactgggagacaactgttgtttc
aacatgtacccagaacccactgagtttcctgatccggtccagcctctgccgcccattcac
attgatgatgaaatgacgccgtactcagtaattccgatgatttacccaacaaacggacac
ctcatgtcggactggcctgtggggatgtgtaagagagagtatagaaagcccaagccaata
gacccacagctgctacaatcgatgaaggtttatcagaacgtcggctacgttcccaaccca
gggaagggtttgaggaatcagatcgcctacaggctgccgaaagaaggccagccatcacag
acgaggaaaccaagtgttcctgagtctcccctcggacgaggtgaggatccatttcaatcc
atcccaaagaagtatcagaaagtggagatgaagtactcgaagctcggattggaagacttt
gattttcgtcactacaacaagacaaactttgcgggtttggagacaaacattccaaatgct
tactgtaatgctgcacttcagtcgctgtatttccttgagccgctccgatgtcatctgttg
aaccatctgtgtcagcgagaattctgtttgtcatgcgaactgggatttctttttcacatg
cttgactcgcaaaaaggacagacatgtcaggcaaccaacttcctgagggcattccgcacc
atacctgaggcatctgcgcttggtttatgcctcggagaggcagaggagcttgctgggaag
gtgaatctgtctcgcctcattcagagctggcagcgatttgttcaccagcaagttcattca
gagacgtgtgtgaagattgagccggaggtgaaggacaaaccgatggaggctgttaccgag
gcatcaggtgaaaagaagaatgagccggccacaaacaagacaaagaagaagaagaagaaa
ggaaagaagaaggaatccgacgccaaagatgagcaggagcagacagaaagcacagaggaa
gacaattcgaaaagcgtagaagacgaccaggctcagcctgtcaggaaggaggaaaagtcc
atggtaaccaagttgtttgcaatccgtaccaacgtcgtgctgcggtgtcgctgtgggctg
gagagtaaccgtgacaacgacatgacgctcgtcaacctcacctacccggactgctaccca
caaggtgaagagaaaaatcacagttccctgcagcccccggcagcgttcaagttctcgcag
gttattgaacacagcttgtgttcagagaacaccatcaaggcctggtgcaatcagtgtgct
cggtatgaacaacatattcagaagaaagttctgaataatcttcctgatgtcctgggattt
aattgtcagctggaaaatgaaactaatttgaaattctggaaaacacagcaagagatacta
aagctgatgacggaagagactgtgcacatttctgctgttgctcagcggcgtctggcagcg
aagagctgtcgctatggcagctcatgtaaacgcaaggactgcaagttcagacatgaccca
gaacacgatagtgtgttggacgaactagcagagcaacaagaggatgatgaaacctcacca
aaatggctgccgctcggtctcaagataaaactgcttcctaacggaactgttgacatcacg
gagatatcagatgaggagccgctacctaaacaggatgaggagaacactgtgtattatgag
ctgtatggcacactggcccacattaaggacaagggtgcagggaacctcgtcagtcatctc
aatgtgggtgaggaattccaccagcgtaaagagcgcgtcacgtgcacacagtggtatctg
ttcaacgacttctccatcacgcccatcgagaagtacgaggcagttcatttcaacctggaa
tggaaagttccctgtgccgtttactacatgaggagatacctcacgaaatcatacgacctc
acagtgaagaatcccatcaacccagacatcatctacaacgactggggcctgctgaacccg
aagcggaggaagatcacctaccagccactgtcgctcgacgagctgccacagaagggggac
atcgtggggcttgacgcagagttcgtgtcactcaaacaggaggaatctgagcttcgtagt
gacggcactaggtcaacaatcaaaccatcacacatggctgccgccagaataacttgtctc
agagggcaaggagacaaggctggtgatccatttattgatgatcacatttccaatcaagaa
caggtggtagattatctgacccagtactctggcatcaagccaggtgaccttgaccccaac
gtctcgaccaagcacctgaccactctgaaatgcacctatcagaaactgagatacatggtg
gacatcggaatatgttttgtcggtcatggactgaagaaagacttccgagttatcaacata
ctggtgcccaaggcacaagttattgacactgtggaacttttccatctgccgagacagcga
atgatttctctcaggttcttggcatggtactttctcaagatcaacatccagtccgacacg
cacgactcggtggaggatgcgcggaccgcgctgcagctatacaagctgtacaaggacctg
aaggatgagggcggtgacaagctgcaggccaccatcaaggagatgtacgagttcgggcgc
aagtgtcagtggaagatccccaacgtggaggaggaggacatgatcgacgaacaaatctct
tttctctag
DBGET
integrated database retrieval system
