Gigantopelta aegis (peltospirid snail): 121384113
Help
Entry
121384113 CDS
T07458
Name
(RefSeq) LOW QUALITY PROTEIN: helicase SKI2W-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121384113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121384113
Enzymes [BR:
gae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121384113
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121384113
mRNA degradation factors
3'-5' decay
Ski complex
121384113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
MTR4_beta-barrel
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
Ntox28
DUF3516
MSS51_C
Imm47
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121384113
NCBI-ProteinID:
XP_041370282
LinkDB
All DBs
Position
10:complement(36180836..36224836)
Genome browser
AA seq
1253 aa
AA seq
DB search
MKMDSEHLDLNFDLLETGCHGGVEVVPVQNIQSHHLPLKTLPCGLPPVLPSIGDELETFL
TCLEELPVHNFKNAQRFWPRKMCPDRILSLDTCPVQTTIEVERNATTGKLLGYKEEYVTD
EGQSEKNSLSLKRSPGPVSQSVWGNAGSYPFWPGGLDEPEMKLDQDGSGLIEFDLENNLQ
TVAPGLASGMTFKKKMSGSEVDKPDYVAETTTTVINLQDIMADTDDIDFPASDIEDEEVT
ENKERVEESQINELEGLDNLVLTNEKPVEKTALRGKCEAEEWAVKVDVNEPVDDFYKRIP
HMAYKWPFELDIFQKQAILHLESHESVFVSAHTSAGKTVVAEYAIALSLKHMTRTIYTSP
IKALSNQKFRDFKQTFGDVGLVTGDVQLNQTAACLIMTTEILRSMLYNGSDVIRDLEWVI
FDEVHYINDSERGVVWEEVLIMLPQHVNIILLSATVPNTMEFAGWVGRTKRKKIFVVSTS
KRPVPLEHHLYTGNSMKTNSEMFVIVDSKGNFITNGYKKALDAKKERSSKRDQSYGPKGT
RGGNPAQDKNVWLSLIDMLKKKDKLPVVAFTFSKKKIEENAANLLSVDLLTASEKSEVHI
FFHKCIHRLRGNDKHLPQIVQMEDHLKRGLGVHHSGILPILKEVVEMMFQRGLVKVLFAT
ETFAMGVNMPARTVVFDSIRKHDGTNFRDLLPGEYIQMAGRAGRRGLDTTGTVIILCKGD
VPEMSNLHKMMLGKPTKLESQFRLTYTMILNLLRVEQLRVQDMMKRSFSEFHTQKDVQKH
RDALTQITKEVSELRDIECYMCSVDLHNYYDSCKEYHELKQHLQTVVLSHPAAMKALSPG
RIVIINDSHQRRVLGVVLQASAGSSGEKKFIVLVVGENNVNDSVQMKTRCVDSEINKQYV
DSEGPEPVLPTQLFVPDGPITQMLLTLMPRDISVITTKTIKVEPEKIVNDIKKRQQARFK
DDPPGQSVSIATQELMRLTEANPSGLPGLDPVKDLRVRDISLVEQFRALQLMEEVFSKYQ
CIHCPNFDDHFCEIRKNMQLRANYHHLQHLLSDESLVLLPEYEQRVEVLKKLNYLDQNNA
VQLKGRVACEISTHELIITELVFENVLTGLHPADIAALLSCMVFEQKRCSEPNLADNLEK
GKESILEVAERIGKLQKECGMSMPVEDFKALFHFNLMEVVFEWARGMPFAEITNLTDVQE
GIIVRCIQRLNETLRDVRNAARIIGDPVLYQKMEEASTMIKRDIVFAASLYTQ
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggattctgaacatcttgacttgaattttgacctgctagaaactggctgccat
ggtggagtggaagttgttccagttcagaatatccagtcacatcatttacctttaaagacc
cttccttgtggtttgccacctgttctgccaagtatcggagatgagctggaaacctttctt
acatgccttgaagagttgcctgtgcataactttaaaaatgcacaaaggttttggccccgc
aagatgtgcccagatcgcatactgtctttagatacatgtccagttcagacgactatagaa
gtggagaggaatgccaccacaggaaaactgttagggtacaaagaggaatatgttacagat
gaaggccaatcagagaaaaattcactatcactgaagcgtagtcctgggccagtctcacaa
agtgtttggggtaatgcaggcagttacccattctggccaggtggacttgatgaaccagaa
atgaagttggatcaagatggcagtggattaatcgaattcgacctagagaataatcttcaa
acagttgctcctgggttagcatctggaatgacatttaagaagaagatgtctgggtctgag
gtagataaaccagattatgttgccgagacaaccaccacagtgatcaacctccaggacata
atggctgacaccgatgacattgactttcctgccagtgatattgaagatgaagaagtaaca
gaaaataaagagagagttgaagaaagccaaataaatgagctagaaggactagacaatctt
gtcctgacaaatgagaaacctgttgagaagactgcgttacgaggaaagtgtgaagcggag
gagtgggcggtgaaggttgatgtcaacgagcctgttgatgatttctacaagagaatacca
cacatggcctacaagtggccgtttgagttggatatcttccagaaacaagcgatacttcat
ctggaatcgcatgagagtgtgtttgtgtctgcccacacgtcggccggtaaaacagtggta
gcagagtatgctattgctttgtctctaaagcatatgacacgaacaatttatacatctccc
atcaaggcattgtccaatcagaaattccgagactttaagcagacgtttggcgatgttgga
ttggttactggtgatgttcagttaaaccagacagctgcctgccttatcatgaccacagag
attttaaggtcgatgttgtacaatggatcagacgtgataagagatttggaatgggtgatt
tttgatgaagttcactacataaacgattccgagagaggagtggtgtgggaggaggttttg
ataatgcttccccagcatgtgaatataatattgctcagtgcaacagtacctaacaccatg
gagtttgcaggttgggtgggacgcacgaagcggaagaagatctttgtggtgagcacttcg
aagcgccccgtgcctctcgagcaccacttgtacacgggcaacagcatgaagaccaacagt
gagatgttcgtcatcgtcgattcaaagggaaactttattacaaacgggtacaaaaaggct
ttggatgctaaaaaggaaagatctagcaaacgggatcaaagttatggcccaaaaggaacc
aggggagggaacccagctcaggataaaaatgtgtggctttccttgattgacatgctcaag
aagaaagataagcttccagttgtagcgttcacgttttccaagaagaaaatagaggaaaac
gcagcaaatttacttagtgttgatctcctaacagccagtgagaaaagcgaagtccatata
ttttttcacaaatgcatccacagacttcgtggcaatgacaagcatcttccacagattgtg
caaatggaagatcacttgaagcgtggtttgggtgttcaccacagcgggatcctgcccatt
ctcaaagaggtggtcgagatgatgtttcagagaggacttgtcaaggttctctttgccact
gaaacatttgcaatgggtgtgaacatgccggcgaggaccgtcgtgtttgattccatccgt
aagcatgatggcaccaacttccgggacctcctgccgggcgagtacatccagatggccggg
cgggcggggcgtcgtggcctcgacacaactggcacggtcatcattctctgtaagggggac
gtgcctgagatgtcaaacttgcacaaaatgatgctgggtaaacccacgaagctggagtcg
cagttccgactgacgtacacgatgatcctcaatctgctgcgagtggagcaactgcgagtg
caggacatgatgaagaggagtttctccgagttccacacgcagaaagacgtccagaaacac
cgggacgcgctcacacaaatcaccaaggaggtgagcgagctgcgagacatagagtgctac
atgtgctccgtcgacctgcacaactactacgactcgtgtaaggagtaccatgaactcaaa
caacacctacagactgtggttctgtctcaccctgctgccatgaaggctctgtctccggga
cgaatcgtgatcatcaatgactctcaccaacgtcgcgtccttggggttgtcctgcaggcc
agcgccggctccagtggggagaagaagttcattgtgctggtcgtaggtgaaaataatgtg
aacgattcggtgcagatgaaaacacggtgcgttgattcggagataaataaacagtatgtt
gattcagaaggacctgagccagtgttgccgactcaactgtttgtgcccgatggtcccatc
acacagatgttactgaccctgatgcctagggacatcagcgtcatcacgacaaagactatt
aaagtggaaccagagaagattgtcaatgatatcaaaaaaagacaacaagctcgttttaaa
gatgaccctcctggtcagtctgtttccatagcaacacaagaattgatgcgattgacagaa
gcgaacccatctggcctacctggtcttgatccagtgaaggatttgcgtgttcgtgatata
agtcttgtcgaacagttcagagctctccaactcatggaggaagtattctccaagtatcag
tgcatccactgtcccaactttgatgatcatttttgtgagatccgtaaaaacatgcagctc
cgtgctaattatcatcatctccaacatctgctgtccgatgagagcctcgtcctgctccca
gaatacgaacagagggttgaggtccttaaaaaactgaattatctagatcagaacaacgca
gttcaattgaaaggtcgagtagcgtgcgagatcagcacacatgagttgatcatcactgaa
cttgtgtttgagaatgtactaacgggcctgcatcccgccgatatcgctgccttgttatca
tgcatggtgtttgaacaaaaacgctgctcggaaccaaatttagcggataatttggaaaag
gggaaagaaagtattcttgaagtggctgaaaggataggaaagctgcagaaagagtgtggg
atgtcaatgcctgtggaagacttcaaggccttatttcactttaacttgatggaagttgtt
tttgagtgggctagaggaatgccttttgccgagatcaccaatttgacggatgtgcaggag
ggaatcattgtgcgctgcatccagcgactgaatgagactttacgagatgtccgcaatgca
gcccgcatcataggagacccagtgttgtaccagaagatggaggaagcatccaccatgatc
aagagagacattgtatttgcagctagcctatacacccagtga
DBGET
integrated database retrieval system
