Gigantopelta aegis (peltospirid snail): 121384182
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Entry
121384182 CDS
T07458
Name
(RefSeq) regulator of nonsense transcripts 1-like isoform X1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03013
Nucleocytoplasmic transport
gae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121384182
03015 mRNA surveillance pathway
121384182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121384182
Enzymes [BR:
gae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121384182
5.6.2.5 RNA 5'-3' helicase
121384182
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121384182
mRNA cycle factors
Common to processing body (P body) and stress granule
121384182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
NPHP3_N
DEAD
NAT10_TcmA_helicase
UvrD-helicase
nSTAND3
AAA_16
ATPase
SRP54
AAA_22
nSTAND_NTPase5
Herpes_ori_bp
UvrD_C_2
PhoH
AAA_32
Motif
Other DBs
NCBI-GeneID:
121384182
NCBI-ProteinID:
XP_041370387
LinkDB
All DBs
Position
2:34018750..34050248
Genome browser
AA seq
1110 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEETDLIGADTQGSDFDFTDFTLPSQTQSQTQASQLDAGQSQS
QVNGLDRPVQNGLDGIVNSVTQGVAELNFEEDEEEQFYMKDLPKYACSYCGIHDPSCVVF
CNTTKKWFCNGRGNTSGSHIINHLVRAKAKEVTLHKDGPLGETILECYNCGCRNVFLLGF
IPAKADSVVVLLCRHPCATLSNLKDMNWDPNQWQPLIQDRQFLAWLVKVPSDQDQLRARQ
ISAQQINKLEELWKENPDATLEDLEKPGVDEEPQQVLLRYDDAYQYQNIFGPLVKLEADY
DKKLKESQTQDNIVVRWDFGLNKKRIAYFHLPKANDEMKLMHGDELRLRYIGELHKPWSG
VGHVIKIPDNYSDEVAIELKSNAGVPSECTHNFVVDFVWKSTSFDRMQAALKTFAVDEMS
VWGYIYHKLLGHEVEDVVLKCSLPKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGT
GKTVTSATVVYHLVKQSNGSVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPV
SFLALHNQIRNLESVPELQKLQQLKDVTGELSSQDEKRYRALKKQCERELLQAADVICCT
CVGAGDPRLAKMQFRSVLIDESTQATEPECMIPVILGCRQLVLVGDHCQLGPVVMCKKAA
RAGLSQSLFERLVVLGIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAERTRKNMD
FPWPQADKPMFFYCTSGQEEISSSGTSYLNRTEAANVEKLTTRFLRAAVKPEQIGIITPY
EGQRAYLVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIVLSCVRSNEHQGIGFLNDP
RRLNVALTRAKYGVIIVGNPKVLSKQTLWNHLLTYFKEQKCLVEGPLNNLKESLIQFSKP
RKLVNTANPGGRFMSTTMFDARELLVPGSVYDRSVTYREPVVRTHDQLSYIGPERAYQGA
ALNLPVPVNMFLPPVPQPFQPQPMPLGNKNVPPPPRRMGGNAMRHKKPPRYSNMQPNMAQ
VSMLGSQSQASQDASQPYSQGPLTQGHLSMSQPFQMSQPGLSGLSQAELSQDSFLADDFK
SQADGMLSQDSTYQGDRFFYGSQLSQGPFN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagatgcttacggaccgagctcacaaactttaactttcctggataccgaagaa
actgacctcattggtgccgacacccaagggtccgactttgattttaccgactttactctt
ccttctcaaacccagtcacaaactcaggcttcccagttagacgctggtcaaagtcagagt
caggtaaatggattagatcgtcctgtacagaatggcttggatggcattgtcaactcggtc
actcaaggagtggccgaactcaactttgaggaggatgaagaagagcagttttatatgaaa
gacttgcccaaatatgcctgctcatattgtgggattcatgatccatcgtgtgtggttttc
tgcaatactacaaaaaagtggttttgcaatggccgtggaaacacatctggcagtcacatt
atcaaccacttggtccgcgccaaggccaaggaggtgactctgcacaaggacggcccactg
ggagagacgattctcgagtgttacaactgcggctgtcgcaacgtctttctgctcggtttt
attcctgccaaggccgactcggttgttgtgctgctttgtcgacatccatgcgccactcta
agcaacctcaaggacatgaactgggatccaaaccagtggcagccattgatccaggatcgt
cagttcctagcgtggctcgtgaaggttccatcagatcaagaccagttacgggctcgccag
atctcagcacagcaaatcaataagctggaagaactatggaaggagaatcccgatgctaca
ctggaggacttggagaagccaggtgtggacgaggaaccacagcaagttttgctcaggtat
gatgatgcgtatcagtaccagaatatttttggcccgctagtgaagctcgaggctgactac
gacaagaagctgaaagagtcacagactcaagacaacatcgtcgtacgctgggactttgga
cttaacaagaaacgcatcgcctatttccacctccccaaggccaacgatgagatgaagttg
atgcacggtgatgagctgcgattgcgctacattggagagctccacaaaccctggtctgga
gtggggcacgtcatcaagattcctgacaattatagtgatgaagtggccattgaattgaag
agcaatgccggagtgccatcagagtgcacacacaactttgtggtggactttgtgtggaag
tcaacctcatttgacagaatgcaggcggccctgaagacgtttgctgtggacgagatgtcc
gtgtggggctacatctaccacaagctgctgggtcatgaggtggaggacgtcgttctcaag
tgctccctccccaagaggttcagcgccccagggctccccgaactcaaccactcacaggtg
tacgccgtcaagactgtcctccagcgaccactcagtctcatccagggtccgccaggcaca
gggaaaacggtaacgtcggcaacggtagtctaccatcttgtgaagcagagcaacggatca
gtgcttgtctgtgctccgtctaacatcgctgttgaccaactgacagagaaaatacaccga
acgggactaaaggtcgtacgtttgtgtgccaagagtcgagaggccatcgattcccctgta
tccttcctggctctacacaaccaaatcaggaatctcgaaagtgttccggagttgcagaaa
ttacagcagttgaaggatgtgactggtgaactgtcatctcaggatgagaagcgataccgt
gccctgaagaaacagtgtgagagagagctcttacaggctgctgatgtgatatgctgtacc
tgtgtgggagccggcgaccctcgtctggccaagatgcagttccgctcggtgctcattgac
gagagcacacaggccacagaacccgaatgtatgattcccgtcattctgggatgccgccag
ctggttcttgttggtgatcactgccagcttggtcctgttgtcatgtgtaagaaggccgcg
cgtgcaggactttcccagtcgctcttcgaaagactggtcgtgctcggaattcgaccaatc
agactacaggtgcagtatcgaatgcacccgtcactcagcgctttcccgtcaaacatattt
tacgaggggtctctacaaaatggagtgactgctgctgaaagaactcgcaagaacatggac
tttccatggccacaagctgacaagccaatgtttttctactgcacatccggccaagaggag
atatccagctctggaacttcctatctcaataggactgaagctgccaatgtggagaagttg
acaactcgtttcctgcgtgcggccgtgaagcccgaacagattggaatcattactccatac
gagggtcagcgggcgtacctcgtacagtacatgcagtacagcgggtcactcaacaagaag
ctctaccaggaaattgaggtagccagtgttgatgcatttcaaggaagagagaaggatttc
atcgtgctctcgtgcgttcgctccaacgagcaccaggggattggttttcttaacgacccg
agacgtctcaacgttgccctcacccgagccaagtatggtgttattattgtgggcaatcct
aaagttttgtcaaagcaaacattgtggaaccatctgctgacgtacttcaaggaacagaaa
tgtttagttgaaggaccgctgaataatctcaaggagagcctcattcagttcagcaagccg
cgcaaacttgtcaacacggctaatccaggaggtcgcttcatgagtacaacaatgtttgac
gctcgtgaactgttggttccaggtagtgtctacgacaggagtgtcacataccgtgagcct
gtggttagaacacacgaccagctgagctacatcggacccgagcgggcctaccaaggagcg
gcgctgaacctcccggtccctgtcaacatgttcctgccacccgtaccgcagcccttccag
cctcaacccatgccgctaggaaacaagaatgtgccgccgccaccacgcagaatgggaggc
aacgcaatgcgccacaagaagccgccacgatacagcaacatgcagcccaacatggcgcaa
gtcagtatgctgggatcgcagagtcaagccagtcaggatgcctctcagccgtactcacaa
ggtccgctgacccagggccacctgtcgatgagccagccattccagatgagtcaacctggc
ttgtcaggactctcacaggcagagctctctcaggacagtttcctagcggatgacttcaag
tctcaggctgacggcatgctgtcgcaggactccacgtaccaaggggaccgcttcttctac
ggctcccagctttcgcaagggccatttaactaa
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integrated database retrieval system
