Gigantopelta aegis (peltospirid snail): 121384436
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Entry
121384436 CDS
T07458
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121384436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121384436
03041 Spliceosome [BR:
gae03041
]
121384436
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121384436
Spliceosome [BR:
gae03041
]
Complex B
Other components
Prp19-related factors
121384436
Complex C
121384436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_8
Mad3_BUB1_I
TPR_12
ARM_TT21
TPR_15
ARM_TT21_C
ATG1-like_MIT2
PPR
Motif
Other DBs
NCBI-GeneID:
121384436
NCBI-ProteinID:
XP_041370766
LinkDB
All DBs
Position
10:33889245..33928055
Genome browser
AA seq
850 aa
AA seq
DB search
MPVAEESYRDDIFFEEEDLAYEEDILRNPFSVKCWLRYLEHKKGSSREVINLIFERALKE
LPGSYKLWYQYLRLRRRQVRGRCVTDPAYEDVNSAFERSLVFMHKMPRIWIDYCQLLIDQ
GKITRTRRTFDRALRALPITQHNRIWPLYLKFVRMYEIPETAVRVYRRHLKLQKENAEEY
IEYLKSIDWLDEAALKLTDIINDETFVSRDGKSKHQLWNELCDLIAKNPDKVSTPKIEPI
IRQGLKRYSDQIGVLWNSMADYYIRGGHFERARDIYEEAIDTVITVRDFTQVFDAYAQFE
KSMIAAKMETMEETGASEEDDLDLELRLAILESLMDRRPLLLNSVLLRQNPHNVHEWHKR
VKLYEGKPTEIINTYTTAVQTVNPKQASGKPHTLWVEFAKFYENADQIEDARLIFDKAVK
VEYKTVDDLALVYCEWCEMEIRHENFDDALKLLQKATTPPPRKVAYHDETEKVQARVHKS
LKVWSLYADLEESFGTFKSCKAVYDRIIELRIATPQIIMNYGMFLEENNYFEEAFKAYEK
GIALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQCLENCPPKYAKAIYLLYAKLE
EDYGLARHAMAVYDKATKGVLPEEQYEMFNIYIKRAAEIYGVTHTRSIYEQAIEVLPHEQ
SREMCLRFADLEKKLGEIDRARAIYAHCSQICDPRIAPLFWDTWKEFEIKHGNEDTVREM
LRIKRSVQAIYNTQVNFMSAQMLAVTGVMGDNPAPVGGEADQMQKLEERARQLAEEAVLD
QPKKDKNILFVRSDTTTEELGDMAKIANPEEITIDDEFSSDEEETVEELNVKAVPKKVFG
SLVNEDEDDD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgcagaagagagttacagagacgatattttctttgaagaagaggacttggcc
tacgaagaagatattttgaggaatccattttctgtgaaatgctggctacgctacttggaa
cacaagaagggttcatcacgggaagttatcaacttgatctttgaacgagctctcaaagaa
ttacctggcagctacaagttatggtatcagtatctgcggctccggagaaggcaggttcgg
ggcaggtgtgtgacagacccagcatacgaggatgtaaacagtgcatttgagagatcattg
gtgttcatgcacaagatgcctaggatttggattgactactgccagctgttgattgatcag
gggaaaataactcgcaccaggaggacgttcgaccgagcgttaagagcactgccaatcaca
caacacaacaggatctggccgctgtacctcaagtttgtccgcatgtacgagattccagaa
accgctgtcagggtgtatcggaggcatctaaagctgcagaaggaaaacgctgaagaatac
atagaatacctcaaatccattgattggttggacgaggctgccttgaaactgactgacatc
atcaacgatgaaacgtttgtatccagggatggcaaatcaaaacaccagttgtggaatgaa
ctgtgtgatctgattgctaaaaaccctgacaaggtgagcaccccgaagatcgagcccatc
atccgacagggtttgaagagatactccgaccagattggtgtgctctggaactctatggct
gactactatatcagaggaggacatttcgaaagggcgagggatatctacgaggaagctatt
gacactgtgatcactgtgagggatttcactcaggtgtttgatgcgtatgcacagtttgag
aagagtatgattgccgccaagatggaaaccatggaagaaacgggagcctctgaggaagat
gatcttgaccttgaactgcggttagctatactggaatctttgatggatagacgacctttg
cttttgaacagtgtcctgttgaggcagaatccacacaatgtccatgaatggcacaaacgt
gtcaagttgtacgagggaaaacctacagaaatcatcaatacatacacaactgctgtccag
acggtgaacccgaaacaggcctcgggtaaacctcacacactgtgggtggagttcgccaag
ttttatgaaaatgcggaccaaattgaagatgcccgactgatatttgacaaagctgttaaa
gttgagtacaagaccgtggatgacctggccttagtttactgtgaatggtgcgagatggaa
atacgacacgaaaattttgatgacgctctgaagttactgcaaaaagccactacaccgcca
ccgagaaaagttgcataccatgatgagaccgaaaaagttcaagcccgcgtgcacaaatca
ctcaaagtttggtctctctatgcagatcttgaagaaagctttggaacattcaagtcgtgt
aaagctgtttatgacagaataatagagctgagaatagccacgcctcagatcatcatgaac
tatggaatgtttcttgaagaaaacaactactttgaagaagctttcaaggcttatgagaag
ggaattgcattgttcaaatggcctaatgtttatgacatttggaacacatacctcaccaag
tttattgacagatatggtggtaagaaactggaacgggcccgcgatctctttgagcagtgt
ttggaaaactgtccaccgaaatacgcaaaagctatttacctactgtatgcaaagctagag
gaagactatgggctggcaaggcacgccatggcagtttacgacaaggccacgaagggagtc
ttaccggaagaacagtacgagatgttcaatatttacatcaaacgagcggccgagatttat
ggtgtcacacacacaagaagcatctacgagcaagccattgaagttttgcctcacgaacag
tcaagagagatgtgtttacggtttgctgaccttgagaagaaactaggcgagattgacaga
gcgcgggctatctatgctcactgttctcagatatgtgatccaaggattgcaccattgttc
tgggatacctggaaggagtttgaaatcaaacatggaaacgaagacacggtccgggagatg
ttaagaataaaacgcagtgtacaagccatttacaacacccaggtgaattttatgtctgca
caaatgttggcagtgacaggtgtaatgggagataatccagctccagtgggaggtgaggcg
gaccagatgcagaagctagaagagcgtgcacggcaactcgcggaggaggccgtccttgac
cagccgaaaaaagacaagaacatcctctttgtcaggagtgacacgacgactgaagaactc
ggagatatggcgaagattgccaacccagaggagataaccattgacgacgagttctccagt
gatgaggaagaaacagttgaagagttaaatgtgaaggcggtaccgaaaaaggtgtttgga
agcttggtaaacgaggatgaagatgatgattga
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