Gigantopelta aegis (peltospirid snail): 121386180
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Entry
121386180 CDS
T07458
Name
(RefSeq) ATP-dependent RNA helicase cgh-1-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121386180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gae03019
]
121386180
03036 Chromosome and associated proteins [BR:
gae03036
]
121386180
Enzymes [BR:
gae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121386180
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121386180
mRNA degradation factors
5'-3' decay
Decapping complex
121386180
Chromosome and associated proteins [BR:
gae03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121386180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
121386180
NCBI-ProteinID:
XP_041372926
LinkDB
All DBs
Position
12:complement(15762339..15793665)
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AA seq
450 aa
AA seq
DB search
MATEVESPPQLNHASQVNSEHKTTTNDQGWKSKIKMPKRDTRIRTTDVTNTKGNEFEDFC
LMRELLMGIFEKGWEKPSPIQEASIPIALTGRDILARAKNGTGKTGAYAIPILERCDPNK
DEVQALVIVPTRELALQTSQICIELCKHTGCKVMVTTGGTNLKEDIMRLYDPVHCIIATP
GRILDLMNKNLVKIGKCGILVLDEADKLLSQDFKGMLDGIISYLPSSRQILLYSATFPLT
VEEFMTKYLTNPYEINLMDELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIFCNS
TQRVELLAKKITELGYSCYYIHAKMNQQHRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAV
NVVINFDFPKHAETYLHRIGRSGRYGHLGVAINLITYEDRFALHKIEQELGTEIKPIPKQ
IDPSLYVADFHRERDDDDDPAQFAGGPDRR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaggtagaatcaccgccacaattgaaccatgctagtcaggtgaattcggag
cacaagaccacaaccaatgatcagggatggaaatccaagatcaaaatgccaaaaagggac
acaagaattagaactacagacgtgaccaatacaaaaggcaatgaatttgaagacttctgt
ttgatgagagagctgttgatgggaatcttcgagaaggggtgggagaagccctcgcccatt
caggaagcaagcattccgattgccctcacaggtcgggacatcctggcgagggcgaagaat
ggcacggggaagactggagcttacgccatcccgattctagaacggtgcgacccaaacaaa
gatgaagtgcaagcactggtaatagttccgacgcgggaacttgcgctgcagacgagtcag
atctgtatcgaactgtgtaaacacactggctgcaaggtcatggtcacaacgggaggaacc
aatctgaaagaagacattatgagactttacgatcctgtgcactgtatcatagcaacccca
gggcgtatccttgatctcatgaacaaaaacctggtgaaaataggcaaatgtggtatactg
gttttagacgaggctgacaagctgttatctcaggacttcaaggggatgctggacggcatc
atcagctacctgccgtccagcaggcagattctcctgtactcggccacgttcccgctcacc
gtcgaggagtttatgactaagtacctgacgaacccctatgagattaacttgatggacgag
ctgacgctgaagggagtcacacagtattatgccttcgtgcaggagaaacagaaggtccac
tgtctcaatacgctcttctcaaagttgcaaattaaccagtcgataatcttctgcaactcg
actcagcgcgtggagctgctggcaaaaaagataacagagctcggctactcgtgctactac
atccacgctaagatgaaccagcagcaccggaaccgcgtcttccacgacttcaggcagggc
ctctgcagaaacctcgtctgctcggatctcttcacaagaggtattgatattcaggcggtg
aatgtcgtgatcaactttgatttccccaaacacgccgagacgtatctgcacagaattgga
cgctccggcagatacgggcatcttggcgtggccataaacctcatcacttacgaagacaga
tttgcgctgcacaagattgagcaggagttgggaacggaaatcaaacccattccgaaacag
atcgacccgtccttgtatgtcgcggacttccaccgcgagcgtgacgatgacgacgaccca
gcacagttcgccggcgggccagacagacgctga
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