Gigantopelta aegis (peltospirid snail): 121392502
Help
Entry
121392502 CDS
T07458
Name
(RefSeq) LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
gae
Gigantopelta aegis (peltospirid snail)
Pathway
gae03008
Ribosome biogenesis in eukaryotes
gae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gae00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121392502
09123 Folding, sorting and degradation
03018 RNA degradation
121392502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gae03021
]
121392502
03019 Messenger RNA biogenesis [BR:
gae03019
]
121392502
03009 Ribosome biogenesis [BR:
gae03009
]
121392502
03016 Transfer RNA biogenesis [BR:
gae03016
]
121392502
Transcription machinery [BR:
gae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121392502
Messenger RNA biogenesis [BR:
gae03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
121392502
Ribosome biogenesis [BR:
gae03009
]
Eukaryotic type
Pre-60S particles
RNases
121392502
Transfer RNA biogenesis [BR:
gae03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
121392502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_N
XRN_M
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
121392502
NCBI-ProteinID:
XP_041379625
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIVVHCVEEKMKVVQGLKIPVVDATLPNPNEVEFDNLYLDMNGII
HPCCHPEDKPAPENEDEMMEAIFEYIDRIFNIVRPRKVLYMAIDGVAPRAKMNQQRSRRF
RSAIEAKYINWKRLKRIRSKLREDGCELPPLKPDNAHFDSNCITPGTPFMVILSDANVPG
EGEHKIMDYIRKQRASPGHDPNTHHCLYGADADLIMLGLATHEPYFTILREEFKPXSATP
CEVCNQYGHTMKECTGXSXSEFDELATSSIAQEKQFIFIRINVLREYLQRDLKXRWFKFK
YDFERVIDDWVFMCFFVGNDXLPHLPSLQIREGAIDRLITLYKDFLPSSKGYLTHNGFVD
VKNVQVILAELGKVEDEIFRNRRDRDIKDKERRKQQSKTSKNNLGGGSWEGALLSEQVLC
FHVMMWNFTKKLESYVSGTVLGNELLLSVPTIRTTYGCGFSPASCKFLPPCMAKPHVRTK
IPLLTLAIFYEAKLLPNVIMPPPTLRPDDMRFASTCSIICLLDNHFLLLQATPTRHLIKA
LQVFLAINLNNTAIINHPINLVMIKDFHINKNLVDHLKATIHKGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcctttttccgatggctctctcgaaaatatccttctattgtagtacat
tgtgtggaagaaaagatgaaggttgttcaagggttaaaaatacctgttgttgatgctaca
ctacctaatcccaatgaagtggagtttgataatctctatcttgatatgaatggtattatt
catccatgttgtcatcctgaagacaaacctgctccagaaaacgaagacgagatgatggaa
gcaatctttgaatatattgataggatctttaatattgttcgtcctcgtaaagtcctttac
atggctattgatggagtggctcctcgagctaaaatgaaccaacagagatcacgacgattt
agatctgctatagaagctaagtatataaactggaagagattaaagcgtattcgtagtaaa
cttagagaggatggttgtgaactgccaccattaaaacctgataatgctcactttgacagc
aattgtattactccaggtacaccattcatggtcatactatctgatgctaatgttcccggt
gaaggggaacacaagataatggactacattcgtaaacaacgtgcttcccctggacatgac
ccaaacacacatcattgtttatatggagcagatgctgatttgataatgttgggattagct
acacatgaaccttatttcactatcttaagagaagagttcaaaccannatcagccacgcca
tgtgaagtctgcaaccaatatggtcatactatgaaggaatgtactggttgaagttagagt
gaatttgatgagttagctacttctagtattgctcaagagaagcagtttatttttattaga
atcaatgtcttgagagaatatcttcaaagagatctaaaanntagatggtttaagtttaaa
tatgattttgaaagagttattgatgattgggttttcatgtgtttctttgttggcaatgac
ntcttaccacatcttccttcactacaaattagagaaggagctattgatagactcattact
ttgtataaagatttcttaccatcgtcaaaaggttatttgactcataatggatttgttgat
gttaaaaatgttcaagttatattagcagagcttggtaaagttgaagatgagatatttcgg
aacaggcgtgatcgtgacataaaggacaaagagcgacgaaaacagcagtcaaaaacgtca
aaaaataatttgggaggagggagctgggaaggagcgttactatcagaacaagttttgtgt
tttcatgtgatgatgtggaattttacgaaaaagttggagagttatgtctcagggactgtg
ttgggtaatgagctcttattatcagttccgaccattagaacaacttatgggtgtgggttt
tccccagcaagttgcaaattccttcctccctgtatggcaaaacctcatgttaggacgaaa
atcccacttttgactctggctatattttatgaagctaagctccttcctaacgtcattatg
cctccgcccactttaagacctgacgacatgagatttgcttccacctgctccatcatatgc
ctcttggacaaccacttcctcctcctccaagccacacctactcgtcaccttatcaaggcc
ctccaggttttcctagctatcaacctcaacaacacagctatcatcaatcatcctatcaac
ctcgtcatgatcaaagacttccatatcaacaagaatttagtagatcatctcaaagcaact
atccacaagggattataa
DBGET
integrated database retrieval system
