Gambusia affinis (western mosquitofish): 122819215
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Entry
122819215 CDS
T07758
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122819215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122819215
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
122819215
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GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
SHE3
XLF
ALMT
Motif
Other DBs
NCBI-GeneID:
122819215
NCBI-ProteinID:
XP_043951700
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Position
LG17:1995739..2015745
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AA seq
342 aa
AA seq
DB search
MNTSVREIHLSSQADFSYFLRVDWEGRGLGFGFKLLLTDGQKAWSGKVSEAVVNEEAEEL
EMVKEKYIQDLLQALTEPEPSASYCFTLKPHPPTSSCTVTLTYEKMQKDISFKLGSVSLD
AVEEPAEAVRAVLMHTLQEGNKLQQHNHKLKEENQRLIQEHQYITEKMKHYAEGVETLKA
ELYSRFVLLLNEKKAKIRSLQEAFTKLQQRRNSEEQKNKDSAKSDQTAGHNSEVDEYGGS
TDEELKEEQSTGTSHLTSKDSSTPSPLNLRDITDVAPCRKRRFRHLGPPEIAVKKQNPEA
AQKKRADPSAASNQLQTPQLPVDATKAASAGTSEAEDLFDDF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcagtgcgtgaaatccacctctcctctcaggctgacttttcctactttcta
cgagtggactgggaggggcggggcttaggctttgggttcaaattgcttttgacagatgga
cagaaggcatggagtggaaaggtgagtgaggcggtggtgaatgaagaggcagaggaactg
gagatggtgaaggagaagtacatccaggacctcctgcaggctctaacagagccagaaccc
tctgcctcctactgcttcaccctgaagccacacccacccaccagtagctgcactgtgact
ctgacatatgagaagatgcagaaggacatatctttcaaacttggctctgtctcgctggat
gctgtcgaggaaccagctgaggcggtgagagcggtgctgatgcacacactgcaggaggga
aacaaactgcagcaacataaccacaaactgaaggaggagaaccagaggctgatacaggaa
caccagtacatcactgaaaagatgaagcactacgctgaaggtgtagagaccctgaaggca
gagctgtactctcggttcgtcctgctcctcaatgagaagaaagcaaagattcgcagtctg
caggaagctttcacaaagctgcagcaaagaaggaattctgaagaacagaaaaacaaggat
tctgcaaaatcagatcaaacagcaggtcacaacagcgaggttgatgaatatggaggcagt
actgacgaagagctgaaggaagagcagtcaacaggaacttctcatctgacatctaaagat
tcttctactccgagccctttgaacctccgtgacatcaccgatgttgctccctgtcgcaag
cgtcgtttccgccatcttggtcctccagagatcgctgtgaaaaagcagaacccagaggca
gcacagaagaaaagggcggacccctctgcagcatccaatcagctgcagactccccagctc
cctgtagatgctacgaaagcagcttcagcaggaacgtcagaagctgaagacctatttgat
gatttctga
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