KEGG   Gambusia affinis (western mosquitofish): 122819215
Entry
122819215         CDS       T07758                                 
Name
(RefSeq) DNA repair protein XRCC4-like
  KO
K10886  DNA-repair protein XRCC4
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    122819215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122819215
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     122819215
SSDB
Motif
Pfam: XRCC4_CC XRCC4 XRCC4_C SHE3 XLF ALMT
Other DBs
NCBI-GeneID: 122819215
NCBI-ProteinID: XP_043951700
LinkDB
Position
LG17:1995739..2015745
AA seq 342 aa
MNTSVREIHLSSQADFSYFLRVDWEGRGLGFGFKLLLTDGQKAWSGKVSEAVVNEEAEEL
EMVKEKYIQDLLQALTEPEPSASYCFTLKPHPPTSSCTVTLTYEKMQKDISFKLGSVSLD
AVEEPAEAVRAVLMHTLQEGNKLQQHNHKLKEENQRLIQEHQYITEKMKHYAEGVETLKA
ELYSRFVLLLNEKKAKIRSLQEAFTKLQQRRNSEEQKNKDSAKSDQTAGHNSEVDEYGGS
TDEELKEEQSTGTSHLTSKDSSTPSPLNLRDITDVAPCRKRRFRHLGPPEIAVKKQNPEA
AQKKRADPSAASNQLQTPQLPVDATKAASAGTSEAEDLFDDF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaacacatcagtgcgtgaaatccacctctcctctcaggctgacttttcctactttcta
cgagtggactgggaggggcggggcttaggctttgggttcaaattgcttttgacagatgga
cagaaggcatggagtggaaaggtgagtgaggcggtggtgaatgaagaggcagaggaactg
gagatggtgaaggagaagtacatccaggacctcctgcaggctctaacagagccagaaccc
tctgcctcctactgcttcaccctgaagccacacccacccaccagtagctgcactgtgact
ctgacatatgagaagatgcagaaggacatatctttcaaacttggctctgtctcgctggat
gctgtcgaggaaccagctgaggcggtgagagcggtgctgatgcacacactgcaggaggga
aacaaactgcagcaacataaccacaaactgaaggaggagaaccagaggctgatacaggaa
caccagtacatcactgaaaagatgaagcactacgctgaaggtgtagagaccctgaaggca
gagctgtactctcggttcgtcctgctcctcaatgagaagaaagcaaagattcgcagtctg
caggaagctttcacaaagctgcagcaaagaaggaattctgaagaacagaaaaacaaggat
tctgcaaaatcagatcaaacagcaggtcacaacagcgaggttgatgaatatggaggcagt
actgacgaagagctgaaggaagagcagtcaacaggaacttctcatctgacatctaaagat
tcttctactccgagccctttgaacctccgtgacatcaccgatgttgctccctgtcgcaag
cgtcgtttccgccatcttggtcctccagagatcgctgtgaaaaagcagaacccagaggca
gcacagaagaaaagggcggacccctctgcagcatccaatcagctgcagactccccagctc
cctgtagatgctacgaaagcagcttcagcaggaacgtcagaagctgaagacctatttgat
gatttctga

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