Gambusia affinis (western mosquitofish): 122819255
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Entry
122819255 CDS
T07758
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122819255 (ddx56)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122819255 (ddx56)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-60S particles
Helicases
122819255 (ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3638
Motif
Other DBs
NCBI-GeneID:
122819255
NCBI-ProteinID:
XP_043951767
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Position
LG17:complement(2584259..2593462)
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AA seq
558 aa
AA seq
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MAAERLQFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPIIQRVLASKQSVREQDVRALILVPTKELGQQVQTMVRQLTSFCSRDVRVADISGKAD
VSTQRPILMEKPDVVVGTPSRVLAHLNAQNLVLHSSLEMLVVDEADLVFSFGFESDLKNL
LCHLPKIYQSFLMSATFNEDVQALKQLLLHNPVTLKLQGSQLPDSSQLQQYTIKCEEEDK
FLLIYTLLKLQLVQGKTLLFVAAVDRSYRLKLFLEQFAIPACVLNSELPVQSRCHIISQF
NQGFYDIIIATDEQSLVEPAPSSSGKEKKKNGRAKAAKAKDKEYGISRGVDFQNVSNVIN
FDFPTSVDSYIHRVGRTARADNPGTALSFISHTELDALAEVEEALGGDKAEAALKPYEFK
MEEIEGFRYRCRDAMRAVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKD
LHPAVIKPHMKNIPDYLIPETLRGVVNPLSNRRRKRKIKPAAEGVVKSSFKKNVRGRNPL
KSFQYKQTGSKKARGGKS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaaagacttcagtttcatgaaatggggttagacgaccgcctgttaaaggcg
gtggcggatctgggttggtctcagcccaccctcatccaagagaaggccattcctctggct
ctggaggggaaggaccttctggctcgagcgcggaccggatctggaaagactgcagcctac
gccatacccatcattcagcgcgtcctggcctccaaacagagcgttcgggagcaggacgtg
agagctctcatcctggtgccaaccaaagagctcggtcagcaggttcagaccatggtgaga
cagttgacgtcgttctgttctagagatgtccgggtggcagacatctccggcaaggccgac
gtgtcaacgcagagacccattttaatggagaagcctgatgtggtggtggggacaccgtcc
cgcgttctcgcccacctcaacgcccagaacctggtgctccactcttccctggagatgctg
gttgtagacgaggccgacttggtcttctccttcggcttcgagtctgacctgaagaacctg
ctgtgccatttgccgaagatctatcagtcgttcctcatgtcggctactttcaacgaagat
gttcaggccttaaagcaactgctgctgcacaacccggtgaccttgaagctccagggctct
cagctgcctgacagcagccagctgcagcagtacaccatcaaatgtgaagaggaggacaag
ttcctgctcatctacacgctgctgaagctgcagctggtccaggggaaaacgctgctgttt
gtggcagcagtggaccgcagctacagactcaaactgtttctggaacagttcgccatccca
gcgtgtgtcctgaactcggagctgcccgtccagtccaggtgccacatcatcagccagttt
aaccaggggttctatgatatcatcatcgccacagacgagcagagcttggttgaacctgcc
ccgtcttcttcagggaaggagaagaagaaaaatggcagagcgaaagcagcaaaggctaaa
gataaggaatacggcatctccagaggcgtggatttccaaaacgtttccaatgtcatcaac
tttgacttcccaacgtctgttgattcgtacatccatcgagtcggaaggacagcgagagcc
gacaacccaggcacggccctgtcgttcatctctcacaccgaactcgatgccctggcagag
gtggaggaggccctcggtggagataaagccgaggcggcgctcaaaccttatgagtttaag
atggaggagatcgaaggcttccggtacaggtgcagggacgccatgcgggccgtgacgaag
caggccgtgaaggaggccagactgaaggagatcaaacaggagctgctcaactcggagaaa
ctcaagacgtattttgaagacaaccccagagatctgcagctgctcagacacgacaaagac
cttcatcctgccgtcatcaagcctcacatgaaaaacattcccgactatctgattcctgag
actctgcgtggcgtagtgaatccactgtcgaacaggaggaggaagaggaagataaaacca
gctgcagaaggagtggtgaaaagcagcttcaagaagaacgtccgggggaggaatccgctg
aagagtttccagtacaaacaaacaggaagcaaaaaagccagaggtggcaaatcatag
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