KEGG   Gambusia affinis (western mosquitofish): 122819426
Entry
122819426         CDS       T07758                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03082  ATP-dependent chromatin remodeling
gaf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122819426
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122819426
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gaf01009]
    122819426
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gaf03021]
    122819426
   03036 Chromosome and associated proteins [BR:gaf03036]
    122819426
Protein phosphatases and associated proteins [BR:gaf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122819426
Transcription machinery [BR:gaf03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     122819426
    SWI/SNF complex
     122819426
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    122819426
   PBAF complex
    122819426
   SWI/SNF complex
    122819426
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 122819426
NCBI-ProteinID: XP_043952096
LinkDB
Position
LG17:complement(25721440..25725417)
AA seq 368 aa
MQLALSKTFGQKPVKFQLEEDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIMASSHATSVTLLKASECEEIFDGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPSSTSINRNRIGRDKKRTFPLCFDDHDPAVIHENAAQAEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAVASAIRQQIDSYPSDGLLEEQ
TDQRVIIKLNIHVGNISLVDQFEWDMSERDNSPEAFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRIRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcagctagctctgagtaaaacatttggccagaaaccagttaagttccagctggaagaa
gatggagacttttacatggtgggatcagaggtcgggaactacctgcggatgttcagaggc
tccctctataagcgttacccatcactatggaggcggctggcctccgtggaggagaggaag
aagatcatggcttcatcccacgccaccagcgtgacgctgctgaaggcctcagagtgcgag
gagatcttcgacgggaatgatgaaaagtacaaggctgtgtccatcagcaccgagcctccg
gcgtacctcagggagcagaaggcgaagcgcagcagccagtgggttcccaccttacccaac
agctcccatcacctggacgccgttccttcctccacctccatcaacagaaaccggatcggc
cgcgacaagaagaggaccttccccctctgcttcgatgaccacgacccggcggtgatccat
gagaacgcggcgcaggcggaggcgctggttccgatccggttggacatggagatcgacgga
cagaagctgagagacgccttcacctggaacatgaacgagaagctgatgacgccggagatg
ttcgccgagattctgtgcgacgacctggacctgaacccgctggccttcgtccccgccgtg
gcgtccgccatccgccagcagatcgactcgtatcctagcgacgggctgctggaggagcag
accgaccagcgcgtcatcatcaagctgaacatccacgtggggaacatttctctggtggac
cagtttgagtgggacatgtctgagcgcgacaactcgccggaggccttcgccctcaagctg
tgctccgagctgggcctgggcggagagttcgtcaccaccatcgcctacagcatccggggg
cagctcagctggcaccagcgcacctacgccttcagtgagaacccgctccccacggtggag
atcgccatcaggaacaccggagacgccgaccagtggtgccccctgctggagactctgaca
gacgcagaaatggagaagaagatccgagaccaggacagaaacacaaggagaattagacgt
ctggccaacaccgccccctcctggtag

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