Gambusia affinis (western mosquitofish): 122819478
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Entry
122819478 CDS
T07758
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122819478
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
122819478
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
122819478
NCBI-ProteinID:
XP_043952169
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Position
LG17:12468825..12564065
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AA seq
2115 aa
AA seq
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MTATANWVANGASLEDCHSNIFSLAELTGIKWRRYSFCSGGEYGPVISAPAQDDPVLRSF
MHCVQANLLCVWRRKIKPDARELWIFWWGEEPDFSDVIHHELKVADEGLWECGLSYECRT
LLFKAIHNLLERCLNDKGFVRIGKWFFKPHELEEKSLGSSEHLSCSFSFFLHGESNVCTS
VEIVQHQPAYHITERHIRLAQTSSTPVQVILSPYGLSGTLTGQAFKMSDPAARKLIEEWS
YFYPMVLPQKEGSGEKEQKEAGQAYDRSSHVAVDVIVGGVRMTYPAAFVLIAQGDLPVEQ
SPPVPAALGLNKELNNCSVPLTPPTSPEQPCSADSGFVTSASNVPTPDSGMGITTFSPKH
SGKKLTCQVVHQAWRECYLNQSQHVPNQVTDASQRKKVPNAVATWNFNDLGARTTCSCSR
LKQQKLNMSTAPTANIQPCSSSSLSSGPSLYSTSVPKHKTSERPEKPDKQSKRPAVIPFH
HRLSVTEESPLEQDSPGGPQLGALVALESPMEPLSSLPSCKCSKSLSNERKAPESLLHSS
MSPLPPTLSPHPRMQDPEVLDASVDMLACPDGASGLGVITSETAAYTAQLRQREGGSGWW
RGFRTPRTDKSEFRPPELPTEKLEQVETETSTVNNAFKRLYSRSHKRFKISEEKVAEHIH
ALGLFEQPGVEALRETGTGDDPYDFKEGDIEYPFPSSKKFKGSGRETKQKAKGEEITSNG
SLPDGKDAMSIFNSAPKSDDLGQDDAPTKTNPSLTEEKDLAVNISDLENILDEEDVGTVY
PNQHSTKLLLSTEDRLSGKEGRVSVSYPPTVADLQRMFPTPPSLEQHPAFSPITPYRDTP
SQEPPAPSGVTDHLPSLAPTQLTDYMMEMEDGATSPRQDDVKPQIGSSIFAPLSCLPSQT
LPPLKIPEQCYYRPSWALLPKIEHFTPIMHPQNAAFTKDGYTNTPSVNTLTDQDYVQMSV
NTASVSTTTGILPSPATPRFSVPTPRTPRTPRGINTASSGQGSVKQDGTELSSPVSTPST
SLPLSSVEHLARPGPPIPEAHSLYVVLLLSDSVLSVFKDRNFDSCCICACNMNVKGADVG
VYIPDSTCEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRTSEGGRAAERRLALCRR
DPTMGDSRAKQSQDAGPGSPSVMVVIQEQCSQPISCLTSLHLPIHSSCHGRKGALLQSWM
SEKQWADASDACVDCFNAFEQGLQYVDNPTGGKVDLTVVRSSAIHSWPHTNVVDMSRLSS
QDMVRMLLSMQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPL
PIPTVLLGYDRERDFLALSPLALPFWEKLLLEPYGGQRDVAYVVVCPNSTSLLAASQAFF
LELSAVYETCRLGKHRPLSKVSKDGLVQVGQEVEPDKLEELNVDQWLSGQWAGQQHSDNI
SKLKLYAYALKQQLGPQLAALTLDSSLLLPPKPQPPVNNTSSSGQPQTWSADGEQASGAV
SASNASTPGGAISSQPGEITQGGSSDSKGQPSSTPAANTPADTPELSSEQTRIGIPTEAD
SADSIANPPAVVIYVVDAFLSSSGMRHEGGEEEEEEGEEVESGSIWLLGLLRCYTEMLQN
LPETMRPALVLQVVPCQYLLQPASGESRLYLQHLRSMAFSCYSQCRRLLPQQTYIKSLTG
FGPVSTVSSVLKSPEYPRPLQLYSPPFILGPSRPKHPEPGEIWAEVPPKFNVLFVGYCLS
HDQRWILVSCTDQQGELLETCVINVDVPNRTRRPKVSARKMGLQKVWEWCIGIIQMTSLP
WRIVIGRLGRLGHGELKDWSSLLGEHSLQSIGRQLREACRVCGISAADSPSILSACLVAM
EPQGSFVIMPDAVTMGSVFGRSNALNLQTSQLNTPQDASCTHILVFPTSATTQLAPSSYP
TEDNNDDMFPDLPFPDELENDIGHDMMLITSLHSPPNTSPVPSPGSPSGIGMGSHFHHTR
SQGERLLSRDNPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFLKASLHH
HISIAQSDEIPSDKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVH
LAVLVQMYNAILNLL
NT seq
6348 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacggcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagctgacgggcatcaaatggcgccgctacagcttctgcagcggc
ggagagtacgggcccgtgatctcagccccggcccaggatgacccggttctgcgcagcttc
atgcactgcgtgcaggccaacctgctgtgtgtgtggcgacgcaagatcaagcccgatgcc
agggagttgtggatcttctggtggggcgaggagcccgacttctctgatgtcattcatcat
gagctgaaagtggctgatgaggggctttgggagtgcggactgtcctacgagtgcaggacc
ctcctgttcaaagccatacacaacctgctggaaagatgtttgaacgataagggcttcgtg
aggatcggaaaatggttctttaagccacatgagctagaagaaaagtctttgggcagcagc
gaacatctgtcctgctccttctctttcttcctgcacggcgaaagcaacgtgtgcactagt
gtggagatcgtccagcatcagcctgcgtaccacatcacggagcgccacatccgactcgca
cagacctcctccactccggtgcaagtgattttgagtccgtatggcctgagcgggaccctt
acagggcaggccttcaaaatgagtgaccctgctgctcggaagctgatagaggagtggagc
tacttctatcccatggtgcttccacagaaagaggggagcggagagaaggaacaaaaggaa
gcagggcaagcctacgatcgcagctctcatgtggcagtggatgtcatcgtaggcggcgtg
aggatgacctacccagctgcttttgtgctgattgcccagggggacctaccggtggagcag
tctccacctgttcctgcagctctgggcctcaacaaggagctgaacaattgcagcgtgccg
ctgactccgccgacgtcaccagagcagccttgctccgcggacagtggcttcgtgacctcg
gcctctaatgtccctacaccggacagtggcatggggatcaccactttcagcccaaagcat
tctgggaagaagctgacctgccaggtggtccaccaggcctggagggaatgctatctcaac
cagtctcagcacgtaccaaatcaggtaactgatgcgtcacagagaaagaaagtgccaaac
gcagttgctacgtggaactttaacgatcttggagcacgaacaacctgcagctgctccagg
ttaaagcagcagaagctcaacatgtccaccgcacccactgctaacattcaaccttgttcc
agctcctcactgtcttcaggcccgtcattatactccacctccgtgccaaaacacaagaca
agcgagaggccggaaaagcctgacaaacagtcaaagaggccggctgtgattccctttcac
catcgtctttctgtcacggaggagtccccgctggaacaggactcacctggaggaccccag
cttggtgcccttgttgcgcttgaatcaccgatggagccgctgagctctctgccaagttgc
aagtgttccaagtctctctctaatgaaagaaaagcccctgagtcccttcttcattcatcc
atgtctccactcccgcccactctcagcccgcacccccggatgcaggacccggaggttcta
gatgcctctgtggacatgctagcgtgtccagatggggcctcgggtctgggggtgattacc
agcgagacagcggcctatactgctcagctgaggcaaagggagggtgggtctggctggtgg
agaggcttccggactcccaggactgataaaagtgaattcaggccccctgaacttcccact
gagaaattagagcaagtggagacagaaacatccactgtaaacaatgcatttaaaagactg
tacagtcggagccacaagagatttaaaatctctgaagagaaggtggcggagcacatccac
gctctgggcctgtttgagcagccgggcgtagaggcgctgcgagaaactggaactggggac
gatccttacgacttcaaggaaggagatattgagtacccgtttccatcttccaagaagttc
aagggctcagggcgagaaaccaagcagaaggccaagggagaagaaatcaccagcaacggt
tcactgcctgatggaaaagatgcaatgtctatttttaactcggctccaaaatccgatgat
ttgggccaagacgatgctcccactaaaactaatccttctctgaccgaagagaaagatctg
gcagtcaacatctcagatctggaaaacatacttgatgaagaagatgtagggactgtttat
ccaaaccaacactcaacaaagttgctattgtcaacagaagatcggcttagtggcaaagaa
ggaagagttagtgtatcttatcctccaacagttgcagatctccagcgaatgttccccact
cctccttcgttggagcaacacccagcattttctcccatcacaccatatcgagatacaccc
agtcaagagccgcctgcgcccagtggagtgacagaccaccttccatctttggcccccacc
caactcactgattacatgatggagatggaggacggtgcgactagtccccggcaggatgac
gttaagccacagattggatcttccatctttgcgccgctctcctgccttcccagccaaact
ttaccgccactaaagatccctgaacaatgttactaccgtccatcctgggcacttttgcca
aaaattgagcattttacacccatcatgcatccccagaatgctgcgttcaccaaggatgga
tacacgaacactcccagtgttaacaccctcacagaccaagactatgtgcagatgagtgtc
aacactgcctctgtaagcaccactaccggcatccttccctcaccggcaacgccacgcttc
tccgtgccaactccacggactccacgtacaccgaggggaattaatactgccagctcaggg
caaggttctgtgaagcaggatggaactgagctcagctcaccagtctctaccccctccacc
agcctgcctcttagctctgtggagcatttagctagaccggggccccctattcctgaggcc
cacagcctctatgtagtccttctgctctcagactccgtcctcagcgtctttaaggatcgc
aactttgacagctgctgcatctgtgcgtgcaacatgaatgtgaaaggggcagatgttggg
gtgtacatcccagactccacttgtgaagatcagtaccgctgtatgtgtggcttcagtgcc
atcgtgaaccggcgactggctcatggcaccgggctcttcctggaggatgagcttgacata
tttggtcggacttctgaaggaggcagagctgccgagcggaggcttgctctttgtcgccgg
gacccaacaatgggagactccagagctaagcagtcccaggatgctggtcctggctctcca
tcggtcatggttgttattcaggagcagtgctcccaaccaatttcctgtctgacttcgttg
caccttccaattcattcgtcttgtcacggccgcaagggagcgctcctccagagttggatg
tctgaaaagcagtgggcagatgcgagtgatgcttgtgtggactgtttcaatgcttttgag
caggggctgcagtatgtggataaccctacaggagggaaagtcgacctcactgtcgtgaga
agcagtgctatacattcatggcctcacacaaatgtggtggacatgagcaggttgtcgtca
caggatatggttcgaatgctgctgtctatgcagcccttcctgcaggatgccatccaaaag
aagaggacaggacggacctgggaaaacatccaacacgttcagggtccgctcacctggcag
cagttccacaagatggctggaagaggctcctatggttctgaggagtcaccagagcccttg
ccaattccgacagtgctattaggctatgaccgagaacgagacttcttggcgttgtccccc
ctggctttgcctttctgggaaaagttgcttctggaaccatacggaggacagagggacgtt
gcatacgtggtggtgtgtcctaatagcacctcgctgcttgcggcatcacaggcattcttc
ctggagctcagtgctgtttatgagacgtgccgtctgggaaagcaccgccctttgtccaag
gtatccaaggatggccttgtgcaagttgggcaggaagtggagccagacaagctggaggag
ctgaatgtcgatcagtggctgagtggacagtgggctggacagcagcacagtgataatatt
agcaaacttaaactatatgcctatgccttgaagcagcaactaggccctcagcttgcagcc
ctgactttagacagcagtcttctgttgcctcccaaaccgcagcctcctgtaaacaacaca
tcctcttccggacagcctcaaacttggagtgctgatggagaacaagcttcaggtgctgtc
agtgcatcaaatgcatcaacccctggtggagctatctcaagtcagcctggagagataacc
caagggggatccagtgattcaaagggccagcctagttccacaccagcagcgaacacacca
gcggacactcctgaactctcctcagagcagacacgaatcggcatccccactgaggctgac
tcagcagacagcattgcaaacccaccagcagttgttatttatgttgtcgacgcttttctc
agttcaagtggaatgagacatgaagggggtgaggaggaggaagaagagggtgaagaagta
gagtcaggaagcatttggcttctcgggcttcttcgctgctacacagaaatgctgcaaaac
ttgcctgagactatgagaccagcactggtactacaggtggtgccgtgccagtatcttctc
cagccagcgagtggagaaagccgtttgtacctgcaacacctccgctccatggccttctct
tgctattcacagtgcagacggctgctaccccagcaaacgtatatcaagtcgcttactggt
tttggcccagtgtccaccgtcagttcggtactgaagagccctgagtatcctagaccacta
cagctttattcaccacccttcatactcgggccgagccgtccaaagcatccagaaccagga
gagatatgggccgaggtcccacccaaattcaacgtactctttgtaggatactgcctgtct
catgaccaacgctggatcctggtgtcctgtacggaccagcagggggagctcctggagacc
tgtgttattaatgttgatgttcctaatagaacgaggcgtcctaaagtatcagcgaggaag
atgggtctgcagaaagtgtgggagtggtgtattggcatcattcagatgacctccctgcct
tggaggattgttataggtcgattaggcagattgggtcatggggagcttaaagactggagt
tcactcctcggggagcattccctccaatcaattggacggcagctgagggaggcttgtcgt
gtgtgtgggatctcagctgctgattctccctccatcctcagtgcctgcttggttgccatg
gagccccagggctcatttgtgatcatgccagatgcggtgaccatgggctctgtgtttgga
cgcagcaatgctttaaacctacagacgtcgcagctgaacacacctcaggatgcttcctgc
acacatatcttagtcttcccaacttctgccaccactcagctggctcccagctcctacccc
actgaagacaataatgatgacatgttccctgatcttcccttccctgacgaactggaaaac
gatattggacatgacatgatgctgatcacatctcttcactcaccgcccaacacctctcct
gtgccctcgcctgggtcaccttcagggattggaatgggatcacattttcaccataccagg
agccagggagagcgcctgctgtccagggacaaccctccagaggagctgaagcagcagccg
ctggctctgggctactacgtctccaccgctcaggcaaacggacttcctcactggttttgg
gcatcttgcccacaagctgagagccagtgtccacttttccttaaggcatctctccaccac
catatctccatagctcagtcagatgagatcccgtctgacaagaccaagcggacccctcac
cccttagactcaaagaccacctctgatgtcttaaggtttgtgttagaacagtacaacgcc
ctctcctggctgacatgcacacctgccacacaagaccgtcagtcctgcctgcctgtccat
cttgctgtcctggtccagatgtacaatgccattctgaacttactgtag
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