Gambusia affinis (western mosquitofish): 122819495
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Entry
122819495 CDS
T07758
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122819495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122819495
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
122819495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
122819495
NCBI-ProteinID:
XP_043952193
LinkDB
All DBs
Position
LG17:13034004..13062987
Genome browser
AA seq
2836 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISDEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLTRNPRIFRDKSVLQQPLIQQ
YKISQNQVHGSPASNYQQSPSGCFTSPQCGSATQFVPQQNSPIPSPYTPQSPADYIQYNP
PSYSHQTQQVVSGARTILDNKISEHLSSNSSNGNSKPSLDEDYVNVAQRLGNEENYSSIK
AGIFSLSEERAKKPRPPLIMQSPPLEAGTAPDLLLTTADRKKKQRERNKEENENMDKNVF
YDIVSSPSKDSARLTLKLSRVKIPDMDRSEELLPTSPMDSDHNAVVLNNDIQLSGSPEDF
SHKSVVEEHEQVAAQPITKETGVISGIVFDDSEIEAFAEIERIDSANERERCSKEVQDKD
KPLKKRKQDTYPQEPGVETNEGPSLHGGSNISRLTPKKSSAASNGASRPALMVSIDLKQA
GRVIGQPVVVLEQQALCEDHLRHLKTSADTEDRPGIIKMLPDTSPMHFSDGHTESNKQKP
DNQRESRHNHDSKLDCDKGHSEDRHVEMTKLKQDRHSDFRHREEKNNSSHRFQVSRPEML
KSTSKVDRNSKHEEQKGKNKDKDKERDRQRDKDGDKEKLRDKEISRERDKDKVRDRERNR
ERDKSIDVAREEDKYQEKVKSKLRDGDKFRDGEERIEREKFREDDKSRERAKDEDKNLEK
LKQKLRDRDKDGEKVRERDKSIDLDKDEHQDVERVKGKVRDKDKIRDKEKKRERDKLRER
DKDEGKDNHRENIRGRDKSIDVVKDGDKDVDRIKDKVKDKNRDREKPGGREKSREIDKDR
EKDRDRNRNRDKDENFEVSKEQNKDSKRDRERDKGKDRNRDRDRERDRERNKKHKMLPEG
DGNRISFEEQTKAENSKLKQDEGRKSAELNDRQRTSSSSLQTAPNKDQRASGDSNMNQAA
NKWQASEMKMSEFPPFLLGGNSGSLKNFVIPKLKREGKEGTDKDLRIKGKLVDGWSEPLV
RLERVSLVKNLNNKTKPVIVVKRLSIEDVKRIIKETKNEHSSRSRHWASFDKSDRERANK
RKHSMINKRSKYAEVDSDDSDEKDNDDEELESEDEDESPRKRKKKEHDKSWKFEEKKGSR
DHRRSGGFQNSRRGSSGRHRDWSCNDDSDGDSPPPSLNDVARKVKKGKSKMAYDSKMTTE
EKMDSSAFKRFANSVDNILESLEDVDLTAEEDDEIPQELLLGKQQLNELGSDSTKIKAMG
VFNKFSSSKLVKILNILEKNIQDSVTLFTLMGQDNDSMDEERLWRDLIMERVIKSADACL
TALNIMTSPHMPKAVYIEDVIERVLQFTKFHLQNTLYPQYDRSYRADRHGGASHTSKSKR
PKSSAHKQKVVVGLYNKVCDIISIISELLEIQLLTDTTILQVSNLGITPFFVENVNELQL
CAISVVTAVFSRYEKHRQLILEEIFASLVRLPTSKRGLRNFRLNTSDSDGPPLYIQMVSA
LVLQLIQCVVNLPTERETEEEPKKKVDKDVLITNSYETAMRTAQNFLSVFLKKCGSKQGE
DDYRPLFENFVHDLLSAVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGT
VASSLRKDSLSCKMDQRTIDRILKETPGSDEVQQLQKAFLNFLDENIDADPALLFARKFY
IAQWYRDTTVEVEKAMKSQNDDDDPKYRRHSTDSDAEEIVQTVEARKKFLRKIIKTTPSN
FSSVKISSDTVDYEDSCLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKAMKCLS
EVVAVDPSILGRVDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPELIEQYYDMLIERI
LDTGISVRKRVIKILRDICLELPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFSP
TPSHDEEAMNRKILNITDVVLACKDSGYDWFEQLLQNLLKSEEDASYKPTKKACVQLVDN
LVEHILKYEESIADCEEKGINSGRVVACITTLFLVTKIRPNLMVKHAMAMQPYLNTKCST
QNDFMVICNVSKILELVVPLMENPSESFLNTIEGDLMKLIIKHGMTVVQHCVSCLGAIVT
KVTHNYKFVWACFNRFYGALAKLKTQHQEDPSGSTLAANKPTLLRSLFTVGALCRHFDFD
QEEFKGANKIIIKDKVLELLLYFTTHEDEEVQIKAIIGLGFQFIMHPELMFVQDVKVLYI
SLLSDENRAVNLKIHVLKNLQTYLQEEDSRMQEADREWKKQAKQEDLKEMGDISSGMSSS
IMQIYLKQVLESFFHSQSTVRHFALNVITLTLSQGLVHPVQCVPYLIAMGTDPEPTMKNK
ADQQLVEIDKKYSGFIHMKAVAGLKMSYQVQQAINGGKRAVVRGFRHDDSDSALCSHLYS
MVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQTQEEPLFIMHHIDITL
SVSGSNLLQSFKECLRKEPVRHEKKVKTKKRKKKHSHKRKNSSDEDDDEEKSSSTSSSSS
SSNSSSSSSSDEEVEEVRKRKKLGGGDSDSDLGDEEAVMDRLPENTTPLQEFASASQGIL
LLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVHFNPRQTLEYLRSDVANR
NLSYETKRNIVKQFLDFKVLMEHLDRDEEDEDGGEANANARNKAINSLLKGPKPQNHNHS
NHTAPVETDDEESEDEDPPARKPRKDMDSADDTGQTVELMDIVAICRPKYKDRPQIAKIV
QKTKSGYSIHWMTGSYSGSWTVAKKRDGRKKVPWVDSIKESDIIYKKISLTSGQKLTNKV
AQTLRALYAAKDGSKS
NT seq
8511 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctaacc
gacttactgaaccagctgcctttgccttcccctcttccggccaccactgctaagagcctg
ctctacaatggaaggatctccgacgaggtcagcagcctgttggtgtgtcgagatgagaat
ctggtgactcagctggcacatagccttaaccaggtctccacagaacacatagagctgaag
gacaaccttggaaatgatgaaccagagggtgatatgccaatacttcttcaaacattgctg
accaggaaccccaggatcttcagggacaaaagtgtactgcagcaaccattaatacagcag
tacaagatttctcagaaccaagttcatggaagtccagcatcaaattatcagcaaagcccc
tctggatgctttacatccccacagtgtggctcagctactcagtttgtaccccagcagaac
agccccatacccagcccctacaccccccagagtcctgcagactacattcagtacaatcca
cccagttactctcatcagactcaacaagttgttagtggtgcgagaacaattcttgacaac
aaaatctctgagcatctgtcgagtaattcgtctaatggtaactccaaacccagtttggat
gaagactacgtaaacgtggctcaaagactgggaaatgaggaaaattactcttccataaaa
gctggcattttttctctatctgaagagagagcaaaaaagcccaggcctcctcttatcatg
cagtcacctccacttgaagcaggcacagcccctgacctgctccttaccactgccgaccgt
aaaaagaagcagagagaaaggaacaaagaagaaaatgagaacatggacaaaaacgtcttt
tatgacatagttagctcgccatctaaggattctgccagattgaccttaaagctgtcccga
gtgaagatccctgacatggaccgctctgaagaactccttccaacctcacctatggactca
gatcacaacgcggttgttttaaacaatgatattcagttgtcaggttctcctgaagatttt
tcgcacaagtcagtggttgaagagcatgaacaagttgctgcgcagccaatcacaaaggag
actggggtcatcagtgggattgtgtttgatgactctgagatagaagcatttgctgaaatt
gaaaggatagactcagccaacgagagagagcgatgctctaaagaggtccaagacaaagac
aagccactaaaaaaacggaaacaagacacgtaccctcaggaacccggagttgagacaaat
gaaggcccatctttacatgggggcagcaacatcagcagactgacacccaagaagtcgagt
gctgcgagtaatggtgccagtcgacctgccttgatggtcagtattgatctgaagcaagct
gggagagtaataggacagcctgtagttgtcttggaacagcaagcgttgtgtgaagatcac
ttgcgtcaccttaagacaagtgcagatactgaagacagacctgggatcatcaaaatgctt
ccagatacctccccgatgcatttttctgatggacatacagaaagcaataaacaaaagccg
gacaaccagcgtgaatcaaggcacaatcatgacagcaaacttgattgtgacaaagggcat
tcagaggacagacacgtggaaatgacgaagctgaagcaggacaggcattcagactttcga
cacagagaggaaaagaacaacagcagtcatcgattccaagtcagcagaccagaaatgctc
aaatccacaagcaaagtggatcgcaactcaaaacatgaagaacagaaaggcaagaataaa
gacaaggataaagaaagggacagacagagagacaaagatggagacaaagaaaaacttaga
gataaagaaatatccagagaacgagacaaagacaaagtcagagatagagaaagaaacaga
gaaagagacaaatctatagatgtggccagagaagaagacaaataccaggaaaaagtcaaa
agcaaacttagggatggagacaaatttagagatggagaagaacgaattgaaagagaaaaa
ttcagagaggatgacaaatctagagaaagagccaaagatgaggacaaaaaccttgagaaa
ctcaaacaaaaacttagagacagagacaaagatggagaaaaagtcagagaaagagacaaa
tccatagacctggataaagatgaacaccaagatgtggagagagttaaaggcaaagttaga
gataaagacaaaatcagagacaaagaaaaaaaacgagaaagagacaaacttagagaacga
gataaagatgaaggcaaagacaatcatagagaaaatatcaggggaagagacaaatccata
gatgtggtcaaagatggagacaaagatgttgatagaataaaagacaaggttaaagacaaa
aacagagacagagaaaaacctggaggaagagaaaaatccagagaaatagacaaagatcgg
gagaaagacagagacaggaatagaaatagagacaaagatgaaaactttgaagtgagcaaa
gaacaaaacaaagatagcaagagagacagagaaagagacaaaggtaaagacagaaacaga
gatagagacagagagagagaccgagaaaggaacaagaagcacaagatgctgcctgaagga
gatggcaacagaatctcatttgaggagcaaactaaagccgagaactctaaactgaagcaa
gatgaaggcagaaaatcagctgaacttaacgatcggcagagaacgtcgtcttccagcctt
cagaccgccccaaacaaggaccaacgggcaagtggggacagtaacatgaaccaagctgca
aacaaatggcaggcctctgagatgaaaatgagtgagttcccaccgttcctgttggggggc
aattctggaagtctcaagaattttgtgattcctaaattgaaacgagaaggaaaagaggga
acagataaagatctccgcatcaaaggcaaactagtagatggctggagtgaaccattggtg
cggttagagagagtttcactggtgaagaacttgaacaataaaactaaaccagttattgtg
gttaagagactaagcatcgaagatgtaaagaggatcattaaagaaaccaagaatgaacac
agctccagatccagacactgggcctcttttgacaaatcagacagagagagagcaaataag
cgaaagcacagtatgatcaataagagatccaaatatgccgaagtagattccgatgactca
gatgagaaagacaacgacgatgaagagttggagtctgaggatgaggatgagtctccaaga
aaaaggaaaaagaaagagcacgacaagtcatggaagtttgaagagaagaaaggttctagg
gatcaccggcgaagtggaggctttcagaactctcgccgggggtcaagtgggcgccatcgg
gattggagctgtaatgatgattcagatggagactctcctccaccaagcctgaatgatgtt
gctcgaaaagtaaagaaagggaaaagcaagatggcgtacgattccaaaatgacaacagag
gaaaagatggactcctctgcatttaagaggtttgcaaacagtgtggacaacattcttgag
agccttgaggatgtagacctcactgccgaagaagatgatgagatacctcaagagctgttg
cttggaaagcagcaattaaacgagcttgggagcgattctaccaagattaaagcgatgggc
gtctttaacaagttttcttctagtaaacttgtgaaaattctgaatatactggagaagaac
attcaggatagcgtcacacttttcaccttaatgggtcaagataacgactccatggatgag
gagcgtttgtggcgggatctcatcatggagagggtgatcaagtctgcagatgcctgtttg
actgcactcaacataatgacgtccccacacatgccgaaggctgtttatatagaggatgtg
attgagagggtgttgcagttcaccaagttccacctgcagaacactttgtacccgcagtat
gaccgttcttacagagcggatcgccacggaggtgcctcacacacttcaaagtccaagaga
ccaaaatcttctgcccacaaacagaaagtggtggtgggattgtacaacaaggtttgcgac
attatcagcatcatctcagagctccttgaaatccagctgctcaccgacaccacaattctc
caggtctcgaacctcggaattacgcctttttttgtggagaatgtcaatgaactgcagcta
tgtgccatctctgtagtgacagcagttttctctcgctatgagaagcacaggcagctcatt
ctggaagagatttttgcctctcttgttagacttcccaccagtaaacgtggcctcaggaac
tttagattaaacaccagtgattcagatggacccccgttgtacatccagatggtctcagcc
ctcgttcttcaactcattcagtgtgtggttaatcttccgactgagagagaaacggaggag
gaaccaaaaaaaaaggtggataaagatgtcctcattaccaactcttatgaaactgccatg
agaacagcacagaactttctctctgtgtttctcaagaaatgtggcagcaaacagggagaa
gacgactacaggcctctgtttgagaactttgttcatgacctgctgtcggctgtcaacaag
cccgagtggcctgctgctgaactgctgctcagtttattgggcagactgctggttcaccag
ttcagcaataagcagacagaaatggccctcagggtggcgtcacttgactacctcggcact
gtagcctcaagcctgcgtaaagactcgctctcttgcaagatggaccaaagaactatcgat
cgcattcttaaagagactcctggcagtgatgaggtacagcagctccaaaaggctttcctg
aacttcctggatgaaaacattgatgcagatccagctttattgtttgcaaggaaattttac
attgcccagtggtacagagacaccacagtagaggttgaaaaagctatgaagtctcaaaat
gacgacgacgatccaaagtatcggcgacattccacggatagtgacgcagaggagattgta
cagacggttgaggcacggaaaaaattcctccgcaaaatcatcaagacaacaccatcaaac
ttcagctccgtcaagataagctctgacacagtagactacgaagactcctgtctgattgta
agatatctggcctctatgaggccatttgcgcagagctttgatatttatttatcacagatt
ctgagggtcctgggagagagtgctattgcagtgagaactaaagccatgaagtgtttatcg
gaggtggtggctgtggatccaagcatactaggaagagtggacatgcagcgtggggtgcac
tgtcgtcttatggacaactccactagtgtccgagaagcagccgtggagcttcttggccgc
ttcgtactcagtcgccctgagctcatcgagcagtactatgacatgcttattgagaggata
ctggacacaggaatcagtgtgagaaaaagagtcattaagattcttcgagacatctgcttg
gagctgccagatttccacaagataacagagatgtgtgtcaggatgatccgcagagtcaat
gatgaggaagggatcaagaaactggtaaatgagacattccagaaactctggttttccccc
acacccagtcacgatgaagaagccatgaacagaaagatcctaaacatcacagacgtggtg
ttggcgtgtaaagattcaggctacgattggtttgagcagcttttgcaaaatctgctgaaa
tcagaggaagatgcttcatataaaccaactaagaaggcctgtgttcagctggtggacaat
ttagtggaacatatactaaaatacgaggaatctattgcagactgtgaagaaaaggggata
aactcaggtcgtgtggtagcttgcatcaccactctttttctggttactaaaatcaggcct
aacctaatggttaaacatgccatggctatgcagccctacttgaacactaaatgcagtact
cagaatgacttcatggtgatttgcaatgtgtccaagattctggagctcgttgttcctctg
atggagaatccaagtgagtctttcctcaacacgattgagggagacctgatgaagctcatc
attaagcatggcatgacggttgtgcagcactgtgtgagctgtcttggtgctattgtgacc
aaggtcacacacaactacaagtttgtgtgggcttgtttcaatcgcttctatggagctctg
gctaaactcaagacgcagcaccaggaggaccccagcggctccactctggctgctaacaaa
ccaactctgctgcgctcactgttcacggtgggggcgctttgtcgacactttgatttcgac
caagaagagttcaagggagctaacaagatcatcataaaagacaaggttttggagcttcta
ctgtatttcaccacccatgaggatgaagaggtccagatcaaggccataattggtctaggg
ttccagttcatcatgcacccagagctcatgtttgtacaagatgtgaaggttctttatatc
agcttgctgtccgatgagaacagggctgtcaatctgaagatccatgtgctcaaaaatctt
caaacgtacctgcaggaggaggactctcgaatgcaagaggctgaccgtgaatggaagaag
caagcgaagcaggaagatcttaaggagatgggcgacatctcctcaggcatgagcagctct
attatgcagatttacctcaagcaggtgctggagtccttcttccactcacagtccactgtt
cggcactttgctctgaacgtcatcacactgactctcagccagggcctcgtacaccctgta
cagtgtgtcccctacttgattgcgatgggaacagatccagaaccaaccatgaagaacaag
gcagaccaacaactagtggagattgacaagaaatactcaggattcatacatatgaaggct
gttgctgggttgaagatgtcttatcaggtgcagcaggccataaatggagggaaacgtgca
gtggtccgaggtttccgacacgatgactcggactcagccctttgctcacatctctactct
atggtccgtgggaacagacaacacagacgagctttcctcatctccctgctcaacctgttt
gatgacagctctaaaacggaggtaaacatgctgctgttcatagctgacaacctggcatgc
ttcccttatcaaacccaggaggaacctcttttcatcatgcatcatatagacattactctg
tctgtctctggcagcaacctactccagtctttcaaagagtgtttacggaaagagcccgtg
agacatgaaaagaaggtaaagacaaagaagagaaaaaagaagcattctcataagaggaaa
aacagctcagatgaggacgatgacgaagagaagagcagcagcacatccagcagcagcagc
agcagcaatagtagtagcagtagcagtagcgatgaagaggtggaggaagttcggaagcga
aagaagcttggaggcggtgactctgactcagatctgggcgatgaagaagcagtgatggac
cgtctgcctgaaaacaccacccctctgcaggagtttgccagtgcttcacagggtatcctg
ctattgctggtgctcaaacaacaccttaagaatctttatggcttctcagacagcaaaatc
cagaagtactcgccgacggagtctgccaaagtttatgacaaggcagtgaacaggaaatct
aaggtgcatttcaaccctcgtcaaactctggaatacctgaggagtgatgtggccaacaga
aacctcagctatgaaactaagaggaatattgtcaaacagtttttggatttcaaggtgctg
atggagcacttggatcgtgatgaagaggatgaggatgggggcgaagcaaatgctaatgcc
agaaacaaagccatcaattcgctgctgaagggtccaaaaccccaaaatcacaaccacagt
aatcacactgctccagtagagacagatgatgaggagagtgaggatgaagatcctcctgcg
cggaaaccaagaaaagacatggattctgctgatgacacgggtcagacggtggagctaatg
gacatcgtcgccatctgccgccccaaatacaaagacagaccgcagatcgccaagatcgtc
cagaagaccaagagcggctacagtatacactggatgacgggatcttactctggatcgtgg
actgtggctaagaaacgggacggtcgcaaaaaggtgccttgggtcgacagcatcaaggag
tcggacattatttacaagaaaatctccttgacgagcggacagaagctcacgaacaaagtg
gcacagacgttacgagcgctgtacgcggccaaggatgggtcaaagagttaa
DBGET
integrated database retrieval system
