Gambusia affinis (western mosquitofish): 122819555
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Entry
122819555 CDS
T07758
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122819555
04091 Lectins [BR:
gaf04091
]
122819555
Proteoglycans [BR:
gaf00535
]
Cell surface proteoglycans
Others
122819555
Lectins [BR:
gaf04091
]
C-Type lectins
Others
122819555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
RNA_pol_Rpb5_C
DUF4381
ASFV_J13L
7tm_3
Motif
Other DBs
NCBI-GeneID:
122819555
NCBI-ProteinID:
XP_043952289
LinkDB
All DBs
Position
LG17:17556232..17575334
Genome browser
AA seq
2563 aa
AA seq
DB search
MGSFLADLLILLISIGHVYAVSFYGNGYIHLQAIEKSIQTLIHVRFHTSSQSGLLLLAAG
QRDFLLLELISGRLQVRLNLGSGERMLRSERGIHLNDLAWHTVDLNHTHHNINMIVDQSS
HTSLRMPGPDLELSIEDGLFVGGTAGLNHPYLLHISNGFRGCLDEVVFNEHNLLSSLQPY
SGYKSIHEVSLGCSPQFLATEEDPVKFSSSKAFISLPQWEVLQEGTFECELHPSWTDENG
LVLYSSGSDGGFVSIEIRDGHLVASIGNGKGSKTELHSLTRVSSKHTWYPIQLLLQPDSI
QMKVGKELVKASLSQELQAIQLKGPLILGGLDDVAAGKARSAGLSSVSLGEEGRGRSFKG
CLQKIRVNTLKTGLPHAMVTKDITVGCNIGQAPKVVIISNPTDLPDFDIITTQMISNKRN
TNLLVIRTLEVAEGGQALLEPKHMRVNIDFRKLGIHPSELMCRIVDPPVHGQLHLNPNPD
PDGLPEETQERIIRIGAKENDQSFSMLDLWQGRVMYVHRGSEDQNDFFMFSIFSNNKKPL
PVLLEDNHVHRFNISITPVNDPPVLSLPQGNLFTLPEKSKRQLTTDMLRVSDPDNSPEDL
VFNSMGNLNSEAGYLENLDYPGRPINLFSLSDLEEGKISFVHTGVSASRLVLRASDGHRV
SNAVVLRIMAVTLEYKLVNKTGLEVNQGESAIISTRHLAVRVNVADSSVDVWYDVTDLPQ
FGEIQRLHSSGDWKSTTFFSQRILEKERIRYISTYRGIQTQSNITDQFKCKIVINSVAKE
EIVFPIEIHWIQLKVTRSKMEVTGLESAVLTPEDLHVISKGVKISESDLFYRILTVPKKG
RLFLNQMVMQKNSTFSQENITEGLVKYELFNRLHDDTRDSFSFQVFSAHAASTPYDFRIN
IKAESSAVTIINKGLLILEGASKVITKDILFTHTTSNREVHYNVTVSPRHGQLRKINLSN
STSINDNILTFTNQDITEERIMYVHDDSETKQDYFTFQIVVYKPHKNTNKKEDGNTEEHT
FNISVQLVNDQRPVRVVDEVFHVARDGQKLVTLKDLRYRDDDSDFEDSWLVYTRRGIPMG
ELVLASDPSHRLYEFTQRDLEQNKVLFIHSGVSFGRFVLFVTDGKHYVSALLEVMAQDPY
LQVENNTGLMVQQGGIAALTSVNLSVISNLDIRDPQEVTFEVYVPPKHGVLCFSDGQKEA
IIGTDAISVFTQKDLVARRLAYHHSGGHELLDVFNVTARARERSTERRTERGRREVHLDI
GVPVKIYLESHHRPPTIKTNRPVVVAEGQNTSISREDIEVVHEDSLPSDIVFTVQEPPTV
GIIYRVSGSNNLENVHGEKQDLEKSFKEQPVTSFTQEDLNQRSIRYQQQTAGSINDAVVL
EATNGVTKVGPIRMLIDIIPILLPLQVLNLTLDEGSSLPLTSSIIKVASHHFAGLNFLYQ
VIVPPKFGHLEHSRIPGMPINAFTHTEVELEYISYVHDGSETLKDNFTIVANQTEMKKHS
LPCTVYITVTPVNDETPVVTTNRGLKVWVGSVTEISTNELSADDVDTPPEGLEFVVTPPS
NGHLALKSTPSRHILNFTQNHIQSRMLVFVHSGALSGGFHFQVNDGVNFAPRQIFSTTAY
ALVLTLQKNHPMEVYPGSVTPISEQELQVVTNSISDIGRNQSVVFAVTAPPKFGRLVLRM
PDNSFRNISTFTQSMVNDGLILYDQNQPESVGWSATDSFSFTVSSPPAFLPPHTFTILIS
YQANEHLGHPQHRTRLLNNAGAVVAEGGRVTIDRSKLDASNLLGNLPESHRKDHHIMYRV
ISLPRHGALTIQGHNLTSRQSDFSQATLNKFGIMYLHDDSETTKDSFTFRAWVAPLHLPS
SSSSLSLSAFSSDSSSSSTSFSPLYSPPSSSLPALGAASHRHPAVDNVAVTEMFNITVTP
VNDHPPLIRSRAPSMKVLVGERVILGPDNLQVEDHDTPPEELHYLVISKPNNGYLTLGER
PEIVTSFTQYDVNHGRLHFTQQGEVSTGVFYFNVTDGHHRPVYKLFSMEVIKPSVSMVNN
TGLSLVQGRTAVVLTTNQLAAQTNGQRQANISYTVTKHPRHGRIAINDQEVTTFRHEDLQ
FGRVVYHMTDLSESEDSFQVSVSAWSAGVDYGRVTGQTVNVTVRPLIYLREPVRVPSGIA
VKLGKAMIDASELARISRVDPIFEVLSPPKHGKLVKITYDPNHALEALKSFTFRDVVQGR
VAIEETLSDANNQIHNNESSLTKTRGHTPATPLNDSFTFLLKAGNVQPAKGELHFTIFPH
HQMRHGTRGVHKAHGASHERTTPHLGAHNSTTLGAGHRDSVTHGMTAESSHPHILSNKNH
NKTQRKVKPHSRWGNRTRSHGGRLGSIPEVAVEEGHVHAPQPHTPPVPEMPVPISPPIPD
LVQVEILPRPASDPLLIILPLLACLLLIIILVVLILVFRHRKEKQARQRLMHELAAVQLP
TEDSPYLGQPERSMAMPNVLVTQLGSASCPTSPRIPMSPRRSLAPGMTFWGPFESNLAGR
DGNIRGRNNSERDSGDMPQVSPAGFKTSWRSQSPTLKDSQYWV
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttttggctgatctgctaatacttctgatttccataggacacgtttatgca
gtttccttttatggcaatggctacattcacctgcaagcaattgaaaagtccattcagacg
ttaatccacgtaagatttcatacctcaagtcagtctgggctactgcttttggcagcagga
cagagagactttttgcttcttgagctgatttctggacgcctgcaggtacgactgaacctg
ggctcaggtgagcggatgctacgttcagaaaggggtatccatcttaacgatctggcctgg
cacacagtggatctaaaccatacacatcacaacatcaacatgattgtagatcaaagttct
cacactagtctccgaatgccaggaccagatttggagctcagcattgaggatgggctcttt
gttggtgggacagctggactaaatcatccttaccttctacacatctcaaatgggtttagg
ggttgcttggatgaggttgtcttcaatgaacacaacctactgtccagccttcagccatat
tctgggtacaaaagcatccacgaggtatccctgggttgtagtccgcagtttttagcaaca
gaagaagatcctgtgaagttttccagctctaaagcctttatctctctcccacaatgggag
gtcctgcaagaggggacatttgagtgtgaacttcacccttcctggacagatgaaaatgga
cttgtgttgtacagctctgggagtgacggagggtttgtttctattgagatcagagacggt
caccttgtggcctcaataggaaatggaaagggtagtaaaactgagctgcattcactgaca
cgtgtctccagcaagcacacctggtaccccatccagctgctcctgcaacctgatagcatc
caaatgaaggtaggcaaggagttggtgaaggccagcctgagtcaagaacttcaggccatc
cagctcaaaggacctctcatccttggaggactggatgatgttgctgcaggaaaagcaaga
agtgctggattatcttctgtttctttgggagaagaaggaagaggaagatcatttaaaggc
tgcctccaaaaaattagagttaacactctaaaaactggcttacctcatgccatggtcacc
aaagacataactgtgggctgcaacataggtcaggctccaaaggtagtgatcatttccaat
ccaacagatctccctgactttgatattatcacaacacaaatgatcagcaacaagaggaac
acaaacctattggtgattcgaaccctggaggtagctgaaggaggccaggcgctacttgag
cccaaacatatgagggtgaatattgattttcgcaaactggggatccatccatcagagctg
atgtgtcgcattgttgaccctcctgttcacggtcagctacatttgaaccccaatccagat
ccagatgggttgcctgaggaaacacaggagagaattataagaataggagcaaaagagaat
gaccaatctttcagcatgctggacctgtggcaaggtcgagttatgtacgttcacagaggc
tcagaggaccagaatgacttcttcatgttttcaatcttctctaacaataagaagccgctg
cctgtacttctggaagacaaccatgtgcaccggtttaatatcagcatcactccagttaat
gatcctcctgttctcagcttaccacaaggaaacctattcactctgccagagaagtccaaa
cgacagttgacaacagatatgctgagagtctcagatcctgacaacagtcctgaggatctt
gtttttaactcaatggggaaccttaattctgaagctggttacctcgagaacctagattac
cctggcaggcccatcaacttgttctctctaagtgatctggaggagggtaagatcagcttt
gtgcacacaggagtttctgcttccaggctggtcctcagagccagtgatgggcatagagtc
agcaacgctgtagttttaaggatcatggcagtgactcttgagtacaaactagtgaataaa
actggactggaggtgaatcaaggcgaatcggccatcatcagcaccagacaccttgcagtg
cgggtcaatgtggctgatagttcagtggatgtgtggtatgatgtaacagacttaccacag
tttggggagatccagagattacactcaagtggtgactggaaatccactacctttttctca
cagagaattctggaaaaagaaagaattcgatatattagcacctaccgtggaattcagact
cagagcaacattacagaccaattcaaatgcaagatagtaatcaattcagttgccaaagag
gagattgttttccccatagagatccactggattcaattgaaggtaacaaggagcaagatg
gaagtgaccggccttgagagtgctgttctcacacctgaagaccttcatgtaatttctaaa
ggtgttaaaatcagtgagagtgaccttttctacagaattctgacagttccaaagaaaggg
cgattgttcctcaaccaaatggttatgcaaaagaactcaacctttagccaagagaacatc
acagagggtttggttaagtatgaactttttaacaggctgcatgatgacacaagagattcc
ttcagttttcaggtgttctctgctcatgctgcttcaacaccttatgacttcagaatcaac
attaaagccgagtcaagtgccgtaaccatcataaataaaggcctcttaatccttgaagga
gcaagtaaagtaattacgaaagatattttgtttactcacacaacaagtaaccgggaggtt
cattataacgtaacagtgagccccaggcatggccagttaaggaagatcaatctctccaac
tcaacttccattaacgacaacatactgactttcaccaatcaggacatcacagaggagcga
atcatgtacgttcatgatgacagtgagaccaaacaggattacttcacgtttcaaattgtt
gtttacaaaccgcacaaaaacacaaacaagaaggaagacggaaacacagaggagcacacc
tttaacatctcagtgcaactcgtcaatgatcagagacccgtcagggttgttgatgaggtc
tttcacgttgcccgggatggacagaagttggtgacactgaaagacttgcggtaccgagat
gatgactcggattttgaggacagctggctggtctacactcggagggggattccgatgggg
gaactggtgctggccagtgatcccagtcacaggctttatgagttcacacaacgggacctt
gagcagaataaggtgttgtttatccacagcggggtcagctttggtcgttttgtgcttttt
gtaacagatggaaaacattatgtttcagccttgctggaggtgatggctcaggatccatac
ctgcaggtggagaacaacacaggcctcatggtccagcagggtgggattgcggccctgact
tctgttaacctcagtgtcatcagcaaccttgacattcgggatcctcaggaagtgactttc
gaggtctacgttccacctaaacatggcgttctctgcttcagtgatgggcagaaggaggcg
atcataggaactgatgccatttcagttttcacccagaaagatctggtggcccggcgtctg
gcatatcaccacagcggcggtcacgagttgttggatgttttcaatgtgacggcaagagca
agggaaagaagtactgagaggcggactgaaagagggaggagggaggtgcatctagatatt
ggagtgccggtgaagatatacttagagagtcatcacagacctccaactatcaaaaccaac
cgtccagttgtggtggccgagggacagaacacctccattagcagagaagacatagaggtt
gtccatgaggacagtttaccctcagatatagtcttcactgtccaagaacctcctacagtg
gggatcatttatagagtatcaggcagcaacaatctggaaaatgttcatggagaaaaacag
gaccttgaaaagagtttcaaggaacagcctgtaacttcctttacccaagaggatctcaac
cagagatcaatcaggtatcagcagcagactgcaggaagcatcaacgacgctgtcgtcttg
gaagcaaccaatggggtgacaaaggttggacctatcaggatgctgattgacatcatacct
atcctgcttccactgcaggtgttgaacttgaccctggatgaagggtcgtccctgccactc
acatctagcataatcaaggttgccagtcatcactttgcagggttgaatttcctttaccag
gttattgttccaccaaagtttggacacttggagcacagccgtatcccagggatgcctatc
aatgctttcactcacacagaggtggagcttgagtacatctcctatgtccatgatggcagt
gaaacactgaaggacaacttcacaattgtagccaatcaaactgagatgaaaaagcacagc
ttgccatgcactgtttacatcacagtcacacctgtcaatgacgagacccctgttgtgacc
accaaccgtggcctaaaggtttgggtgggttctgtaacagaaataagcacaaatgaactc
agtgcagatgatgtggatactccacctgagggcctggagtttgtcgtcaccccaccgagc
aacggtcacttggctctgaagagcaccccctccagacacatcctgaactttacccaaaat
cacatccagagcagaatgctggtgtttgtgcacagtggtgcattatcagggggatttcac
tttcaggtgaatgatggagttaactttgctcctcggcagatcttcagcacaacagcctat
gctctcgttcttaccttacagaagaaccaccctatggaggtgtacccaggctctgtgaca
ccaatctcagaacaggagcttcaggttgttactaacagcatcagtgacattggaaggaac
cagtctgtggtttttgctgtgactgcacctcctaaatttggacgtctggtcctgagaatg
cctgataactctttcagaaacatttctacatttacacaaagcatggtgaatgacggcttg
attctgtacgaccagaaccagccagagtcggttgggtggtcagctacggactccttttct
ttcaccgtttcctctcctccagcttttcttcctccgcacaccttcaccattttaatctcc
taccaagccaacgaacacctgggccacccccaacataggactagactactaaacaatgca
ggcgccgtggtggccgaaggaggcagagtgaccattgaccgctccaagcttgatgcctct
aacctgctgggaaaccttccagagtcgcacagaaaagaccaccacatcatgtatcgagtg
atttctctgcccagacacggagcactgaccatacagggacacaatctcaccagcagacag
tcagatttctctcaggccaccttaaacaagtttggcatcatgtatctccacgacgactca
gagacgacgaaggacagcttcacttttcgagcctgggtggctcctttgcatcttccctct
tcctcctcttcattatctctgtctgccttttcctctgattcctcttcctcttccacctct
ttctctcctctctactctcctccatcatcctcccttccagcactgggcgcagcctctcat
cgccaccctgcggtggataatgtggcagtgacagagatgttcaacatcactgtgacgcca
gtcaatgaccatccgccgctaatcaggagcagagctccgagcatgaaggttctggttggg
gagagagtcattcttggacctgacaaccttcaggttgaggatcacgacacaccaccagag
gagctgcactaccttgtgatcagtaagcccaacaatggctacttgactttgggagaaaga
cctgagatagtgacctctttcacccagtatgacgtcaaccacggtcgactacattttaca
cagcagggtgaggtttcaactggagttttctacttcaacgtcaccgacggccatcaccgt
ccggtctacaagctgtttagtatggaggtgattaaaccgtctgtatccatggttaacaac
accggcctgtcattggttcaaggtcgcacggcggtggtgctgacaaccaaccagctggcg
gctcaaaccaatggtcaaagacaggccaatatctcctacacagtcaccaagcacccacga
catggacggatcgccatcaacgaccaggaggtcaccaccttccggcatgaggacctccag
tttgggcgggttgtctatcacatgactgatctcagcgaatcagaggacagtttccaggtg
tcagtgtcagcctggtctgctggtgttgactatgggagagtgacagggcagacggtgaac
gttacggtgcgtcctctgatctacctgagagagccagtcagagtaccgagtggtatcgca
gtgaaactgggcaaagccatgattgatgcctccgaattggccagaatcagcagggtcgat
ccgatctttgaggttctttctccaccgaaacatggaaaattagtcaagattacctacgac
ccaaaccacgcgttagaggcactgaagtcatttacattcagggatgttgttcagggccga
gttgccatagaagagactctcagtgacgccaacaaccagattcacaataatgaatcctcg
ctcacaaaaacacgaggccacactccagccacacccctcaacgattccttcaccttcctg
ctgaaggccgggaatgtccagccagcaaagggtgagcttcacttcaccatcttcccccac
caccagatgcgtcacggcacaagaggtgtccacaaagcgcacggtgcgagtcatgaacgc
acgaccccccatttgggagcacacaacagtacgactctgggagctggacacagagactct
gtgacacacggtatgactgccgagagctcacaccctcacattttgtcaaataaaaaccac
aacaagactcagcggaaggtgaaaccccacagccgctgggggaaccgaacgcgcagtcat
ggaggacgattggggagcatcccagaggtagcagtggaagaaggccacgttcatgcccca
caacctcacactcctccggtaccagaaatgccagttccaataagccctccgatccccgac
ctggtccaagtcgagatcctcccccgtcccgcctctgatcccctcctcattatccttcca
ctgctggcttgtttgcttctcatcataatcctggtggttctgattctggttttccggcat
cgcaaagagaaacaagctaggcagaggttgatgcatgaactggctgcggtgcagctgccc
accgaagacagcccatacctgggccaaccggagagaagcatggccatgcccaatgtgctg
gttacccaactcggctccgcaagctgccccacctcccccaggatccccatgagcccaagg
aggagtctggctcctggaatgaccttctgggggccgtttgaatccaacttagcaggcagg
gatggaaatatcagaggtcgtaacaacagcgaaagagattctggtgatatgccccaagtt
tctcctgcaggatttaaaacctcttggagatcccagtccccaactcttaaagacagccag
tattgggtttga
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integrated database retrieval system
