Gambusia affinis (western mosquitofish): 122819644
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Entry
122819644 CDS
T07758
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03420
Nucleotide excision repair
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122819644 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
122819644 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gaf03051
]
122819644 (rad23b)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122819644 (rad23b)
Proteasome [BR:
gaf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122819644 (rad23b)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122819644 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
Dsc3_N
CUE
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
122819644
NCBI-ProteinID:
XP_043952463
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Position
LG17:complement(10676740..10682584)
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AA seq
390 aa
AA seq
DB search
MLVTLKTLQQQTFKIDIDEEETVKTLKERIEKEKGKDIFSVAAQKLIYAGKILSDDTPLK
EYNIDEKNFVVLMVTKPKIASATTQTSSTSSAPVTTAPAAPPAALSSLENPAEPTPSDNK
SEDKPEVTPPSSDPLSTSFGSSGSSEISPNLNLINEAVSTLVTGSSYDAMVYEMMLLGFG
REEVVAALRASFNNPDRAVEYLLSGVSTRDQGPAPGPGTTATLSSGAPAAPSESVNTPAN
TGSSPSTTAGTSPLDFLRNQPQFQVMRQVIQQNPVLLPTLLQEIGRENPDLLHEISDHQE
QFIQMLNEPIPDSAPTGGGGGPGGAGGVGGGTSGGGQMSYIQVTPQEKEAIERLKALGFP
EGLVIQAYFACDKNENLAANFLLQQNFDDD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctggtaactctgaagacattacaacaacaaacatttaaaattgacatcgatgaggag
gagacggtgaaaacattaaaagagaggattgaaaaggagaaggggaaggacatcttttcg
gttgcagcacagaaattgatctatgctggtaaaatcttaagcgatgacacgcctctcaag
gagtacaacattgatgagaagaactttgtggtgctcatggtgacaaagcccaaaatagcc
tcggccaccacacagacttcatcaacctcttcagctcccgtcaccacggctcctgcagct
cctcctgcagcattgtctagtttagagaatccagcagagccgactccctccgacaacaag
tcagaggacaaaccagaggtgacgccaccaagctctgacccattgtccaccagctttggc
agtagcggaagctctgagatttcaccaaacttgaacttgataaatgaagctgtttcaact
cttgtgacaggttcgtcgtatgatgccatggtatatgaaatgatgctcctgggcttcggg
agagaagaagtggtggcagctctgagagcgagtttcaacaaccctgacagggctgtggaa
tacctgctgtcgggtgtgtcaaccagagatcagggtcctgcaccaggacctggtaccacg
gccactttatcaagtggagctccagctgctccctccgaaagtgttaacactcctgccaac
accggatcttcaccaagcactacagcaggaaccagtcccttggacttcctaagaaatcag
cctcagttccaggtgatgcgacaggtgattcaacagaatcctgtcctgcttccaacattg
ctgcaggagatcggcagggagaacccagaccttctgcacgagatcagcgaccaccaagaa
caattcatccagatgctgaatgagccaattccagactcagctccaacaggtggtggagga
ggaccgggtggagctggaggagtgggaggcggtacatctggtgggggtcagatgagctac
atccaggtcacaccacaggaaaaagaagctattgagaggctaaaagccttgggttttcca
gaaggactcgtcatccaggcctactttgcttgtgataagaatgagaacttggctgccaac
ttccttttacaacaaaactttgacgacgattaa
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